Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_P19
         (1154 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    24   2.5  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      23   4.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   7.6  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 561 RTKGFFDSSLSLVRLLRGYRNGESTFK 481
           +T+   D  L       GYRNGE +FK
Sbjct: 18  QTEAKTDKILCFFASWAGYRNGEGSFK 44


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 331 FYYQGPNKIQXLD 293
           FYY+GPN    LD
Sbjct: 356 FYYEGPNSENNLD 368


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +2

Query: 431 SLLSLEKIITSTDLEEIL 484
           SL  LEKI T+TD  E L
Sbjct: 279 SLWVLEKICTTTDAAEFL 296


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,345
Number of Sequences: 336
Number of extensions: 3645
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 33609622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)