Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_P18
         (1244 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    29   0.21 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   1.5  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   2.0  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   3.5  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   8.0  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   8.0  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    24   8.0  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 29.5 bits (63), Expect = 0.21
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = -3

Query: 786 GAXGGXXRGGTPGXXXXPXGXPPPXXGG 703
           GA GG   GG PG      G P P  GG
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGPGGGG 228



 Score = 26.2 bits (55), Expect = 2.0
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -3

Query: 954 GGGGXXXXPPPXGGGG 907
           GGGG    P P GGGG
Sbjct: 214 GGGGSSGGPGPGGGGG 229



 Score = 25.8 bits (54), Expect = 2.6
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +3

Query: 1107 GFFGGGXPXXFXGGGGGPXXGG 1172
            G  GGG P    G  GGP  GG
Sbjct: 205  GGSGGGAPGGGGGSSGGPGPGG 226



 Score = 25.4 bits (53), Expect = 3.5
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = -3

Query: 993 PXKXGPPPXXGXXGGGGXXXXPPPXGGGG 907
           P   G     G  GGGG     P  GGGG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGG 228


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.6 bits (56), Expect = 1.5
 Identities = 19/66 (28%), Positives = 21/66 (31%), Gaps = 4/66 (6%)
 Frame = +2

Query: 620 PXGXXPQXGXXXGVXPXXPPPXXXFKKXP--PXXGGGX--PXGXXKXPGVPPRXXPPXAP 787
           P    P  G    + P   PP     + P  P        P G    P   P   PP  P
Sbjct: 530 PPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQP---PPAPP 586

Query: 788 PXPPXG 805
           P PP G
Sbjct: 587 PPPPMG 592



 Score = 25.8 bits (54), Expect = 2.6
 Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 5/41 (12%)
 Frame = +1

Query: 757 SPPXXPPXGPPLXP----PXXXXXXXXPXFPRXXG-GGLXP 864
           +PP  PP GPP  P    P        P  P   G GG  P
Sbjct: 584 APPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAP 624



 Score = 25.4 bits (53), Expect = 3.5
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +2

Query: 902 GXPPPPXGGGXXXXPPPPXXP 964
           G PPPP  GG     PP   P
Sbjct: 529 GPPPPPPPGGAVLNIPPQFLP 549



 Score = 25.0 bits (52), Expect = 4.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 760 PPXXPPXGPPLXPP 801
           PP  PP  PP+ PP
Sbjct: 581 PPPAPPPPPPMGPP 594


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.2 bits (55), Expect = 2.0
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -3

Query: 804 PXGGQGGAXGGXXRGGTPGXXXXPXGXP 721
           P   QGGA GG  +G  P     P G P
Sbjct: 301 PMPMQGGAPGGPPQGMRPNFYNRPMGDP 328



 Score = 25.4 bits (53), Expect = 3.5
 Identities = 32/136 (23%), Positives = 38/136 (27%), Gaps = 6/136 (4%)
 Frame = +1

Query: 673  PPPPGXXQKXXPPXGGGXPPXGXXXSRGSPPXXPPXG-PPLXPPXXXXXXXXPXFPRXXG 849
            PP  G   +  PP  GG  P          P  PP   P + P             R   
Sbjct: 200  PPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPM 259

Query: 850  GG----LXPXPXXGGXXPXXXXXXXXXXXXXXXA-XPPPPXXXPXRGGAXFXGXXFXXXG 1014
             G    + P    GG  P                   PP    P +GGA          G
Sbjct: 260  MGQPPPIRPPNPMGGPRPQISPQNSNLSGGMPSGMVGPPRPPMPMQGGA---------PG 310

Query: 1015 XPPPGXKXXFFXPPGG 1062
             PP G +  F+  P G
Sbjct: 311  GPPQGMRPNFYNRPMG 326


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
            chain precursor protein.
          Length = 801

 Score = 25.4 bits (53), Expect = 3.5
 Identities = 19/73 (26%), Positives = 20/73 (27%)
 Frame = -3

Query: 1092 KXPXXPXGXXXPXGXKKXXFXPRGGGPXXXKXXPXKXGPPPXXGXXGGGGXXXXPPPXGG 913
            K    P G   P G +     P   G       P   G P   G  G  G    P   G 
Sbjct: 135  KGEPGPVGLQGPKGDRGRDGLPGYPGIPGTNGVPGVPGAPGLAGRDGCNGTDGLPGLSGL 194

Query: 912  GGXPXPXXXXXXP 874
             G P P      P
Sbjct: 195  PGNPGPRGYAGIP 207



 Score = 25.4 bits (53), Expect = 3.5
 Identities = 23/94 (24%), Positives = 24/94 (25%)
 Frame = -3

Query: 1029 PRGGGPXXXKXXPXKXGPPPXXGXXGGGGXXXXPPPXGGGGXPXPXXXXXXPXGXRXKAX 850
            P   GP   +      GP    G  G  G      P GG G P        P     K  
Sbjct: 410  PGAPGPKGPRGYEGPQGPKGMDGFDGEKGERGQMGPKGGQGVPGRPGPEGMPGDKGDKGE 469

Query: 849  XXXXXXXXGXXXXXXPXGGQGGAXGGXXRGGTPG 748
                           P  GQ G  G     G PG
Sbjct: 470  SGSVGMPGPQGPRGYP--GQPGPEGLRGEPGQPG 501


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.2 bits (50), Expect = 8.0
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -3

Query: 798 GGQGGAXGGXXRGGTPGXXXXP 733
           GG GG  GG   GG+ G    P
Sbjct: 297 GGGGGGGGGGGGGGSAGPVQQP 318


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.2 bits (50), Expect = 8.0
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -3

Query: 798 GGQGGAXGGXXRGGTPGXXXXP 733
           GG GG  GG   GG+ G    P
Sbjct: 297 GGGGGGGGGGGGGGSAGPVQQP 318


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 24.2 bits (50), Expect = 8.0
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -3

Query: 798 GGQGGAXGGXXRGGTPGXXXXP 733
           GG GG  GG   GG+ G    P
Sbjct: 249 GGGGGGGGGGGGGGSAGPVQQP 270


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 953,633
Number of Sequences: 2352
Number of extensions: 21879
Number of successful extensions: 97
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 82
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 142243956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)