Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_P15
         (1197 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    25   1.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   3.4  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   3.4  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   3.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   6.0  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   7.9  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = -3

Query: 985 LGGSRPPCPTXTSXXNSYLXAINTPQGSFTILTRHEGHXAXVPAP 851
           L  +RP  P   +  NSYL +++  Q +  + T H+     V  P
Sbjct: 29  LSDTRPMLPYPQNYINSYLFSLSLAQNN-QLFTHHKAPIRPVALP 72


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -3

Query: 415 FPSSSCIIGSCFDPNFTGTARSFLESFHKFFEYM 314
           F   + +  S  + N TG    F + FH  F YM
Sbjct: 161 FSMLNYVYSSKCENNSTGVEHFFKKQFHYIFTYM 194


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 231 CIVAFQSLLTLCGHLRYREIKIFS 160
           C+VA   L+  CG +R   +KI +
Sbjct: 299 CVVALIILILQCGRVRSEVVKILN 322



 Score = 22.2 bits (45), Expect = 7.9
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +3

Query: 384 QEPMMQELEGKIQVKKV-NCISLFLVWMRNVVGMTLT 491
           Q P+ +EL     +K V N +S   +W+ NV  +TLT
Sbjct: 123 QAPVYKELT---DIKLVLNILSDVTLWLSNVNSLTLT 156


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 231 CIVAFQSLLTLCGHLRYREIKIFS 160
           C+VA   L+  CG +R   +KI +
Sbjct: 225 CVVALIILILQCGRVRSEVVKILN 248



 Score = 22.2 bits (45), Expect = 7.9
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +3

Query: 384 QEPMMQELEGKIQVKKV-NCISLFLVWMRNVVGMTLT 491
           Q P+ +EL     +K V N +S   +W+ NV  +TLT
Sbjct: 49  QAPVYKELT---DIKLVLNILSDVTLWLSNVNSLTLT 82


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 445 LIQFTFFTCIFPSSSCIIGSCFDPNFT 365
           L+ F  F C+FP +  I  +  + NFT
Sbjct: 26  LVTFAHFICLFPITINIRKNGLNYNFT 52


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 12/49 (24%), Positives = 23/49 (46%)
 Frame = +2

Query: 374 WVKAGTYDAGARREDTSEKGKLYKPVSRLDEKRGGNDSDMLRNLTLKQE 520
           W K   ++   +R     +  +Y+PV  +   R G D+D  +N +  +E
Sbjct: 174 WKKC--FNIRLKRAGPRTESAVYEPVRIMGVHRPGFDNDCNKNTSTSKE 220


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,067
Number of Sequences: 336
Number of extensions: 4516
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 34835979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)