Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_P15
         (1197 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    29   0.27 
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        28   0.62 
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    27   1.4  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    26   1.9  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     25   4.4  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    25   4.4  
AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     25   4.4  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   5.8  

>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 29.1 bits (62), Expect = 0.27
 Identities = 13/50 (26%), Positives = 31/50 (62%)
 Frame = +2

Query: 485 SDMLRNLTLKQESGKPRSKQKGQDKKKSNLELFKEELRQIQEERSERHKY 634
           S+++R     + +GKPRS+Q+ Q +++   +  + + RQ Q+++ +  +Y
Sbjct: 239 SEVVRRRYRGKATGKPRSQQQPQQQQQPQQKQQQLQRRQQQQQQHQGQRY 288


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 27.9 bits (59), Expect = 0.62
 Identities = 16/69 (23%), Positives = 36/69 (52%)
 Frame = +2

Query: 461 DEKRGGNDSDMLRNLTLKQESGKPRSKQKGQDKKKSNLELFKEELRQIQEERSERHKYKN 640
           D +R  N    L+   ++ +  + + KQ+   +++ +LE+ + E+R+ QE+     +   
Sbjct: 241 DRQRFDNYKRELKETMIRNQQLQRQRKQELIAEEQQSLEVIEGEMRRQQEQDRAALEASK 300

Query: 641 VLRDKGAIE 667
            +R K A+E
Sbjct: 301 EMRRKNALE 309


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 26.6 bits (56), Expect = 1.4
 Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
 Frame = +2

Query: 434 KLY---KPVSRLDEKRGGNDSDMLRNLTLKQESGKPRSKQKGQDKKKSNLELFK--EELR 598
           KLY   K   RL E +     + L  +  ++E      K+K ++  K   E+ K  +E+R
Sbjct: 237 KLYHNEKEAKRLKEDQISKQQE-LNIIEKRKEEADEVLKEKKKEVGKMTREMAKKEQEIR 295

Query: 599 QIQEERSERH 628
           +++ E S+RH
Sbjct: 296 EVEAEMSKRH 305


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 26.2 bits (55), Expect = 1.9
 Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +2

Query: 434  KLYKPVSRLDEKRGGNDSDMLRNLTLKQESGKPRS-KQKGQDKKKSNLELFKEELRQIQE 610
            K+Y P+  +D  +      M R  +LK+E+G      ++   + +   E+F+ +L  +QE
Sbjct: 970  KIYDPLGIVDTVKAKAKQFMQRVWSLKKENGDSYGWDEEIPQQMRQEWEVFERQLTHLQE 1029

Query: 611  ERSER 625
             +  R
Sbjct: 1030 VQVPR 1034


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 25.0 bits (52), Expect = 4.4
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +2

Query: 686 PDVGSYDTGDPNTTNLYLGNLNPKITEHQLMEIFG 790
           P+VG    G     NL L NL+P     +L  + G
Sbjct: 574 PNVGPPSLGSDFYMNLDLANLDPVFNSSELRSVLG 608


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 25.0 bits (52), Expect = 4.4
 Identities = 13/55 (23%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +2

Query: 485 SDMLRNLTLKQESGKPRSKQKGQDKKKS-NLELFKEELRQIQEERSERHKYKNVL 646
           S+++R     + +GKPRS+Q+ Q +++   L+     + Q Q+++ +R   +  +
Sbjct: 263 SEVVRRRYRGKATGKPRSQQQPQQQQQQRQLQRQAVGIAQHQQQQQQRQPQRQAV 317


>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 25.0 bits (52), Expect = 4.4
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +2

Query: 731 LYLGNLNPKITEHQLMEIFGRYGPLASIKIMWPRSDEEKA 850
           LYLG  NP +   Q   I G Y  + +    +P   E+ A
Sbjct: 251 LYLGLFNPALKRLQAAVIAGSYDEIVTFATAYPDHFEQIA 290


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 24.6 bits (51), Expect = 5.8
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +2

Query: 647 RDKGAIEQTCDMIPDVGSYDTGDPNTTNLYLGNLN 751
           RDKG I    D   D    +  +P+T +L LGNL+
Sbjct: 541 RDKGLIFVASDFFKDALKINMENPDTRSL-LGNLH 574


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 950,429
Number of Sequences: 2352
Number of extensions: 18760
Number of successful extensions: 39
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 135704004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)