Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_P14
         (1142 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    25   1.1  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   3.3  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   3.3  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   3.3  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   7.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   7.5  

>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
 Frame = +2

Query: 338 EYMKYIGFKSVDNEFTYP----KELSFSKLRMAQVAIERKLHFCCGSVPIRPI 484
           EY +  GF  +D ++ YP    KE   + LR  + A + K H    +V   PI
Sbjct: 131 EYFEKYGFNGLDIDWEYPEAKDKENFITLLREIKEAFQPKGHLLTIAVSAIPI 183


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 91  FYNFEVCDFIAVTCQDLCG 35
           FYN  +CD +A T  +L G
Sbjct: 247 FYNILLCDSVAHTAGELLG 265


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 91  FYNFEVCDFIAVTCQDLCG 35
           FYN  +CD +A T  +L G
Sbjct: 247 FYNILLCDSVAHTAGELLG 265


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 91  FYNFEVCDFIAVTCQDLCG 35
           FYN  +CD +A T  +L G
Sbjct: 567 FYNILLCDSVAHTAGELLG 585


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -3

Query: 837 LTVRSPHKSQSGLSTHLKKSCLN 769
           +T +S   SQ+GLS +L+  CL+
Sbjct: 253 MTPQSLLPSQTGLSPYLRFGCLS 275


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 394  LWICKFVVYRFESD 353
            L++C F VY F SD
Sbjct: 1134 LFLCGFCVYEFASD 1147


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 250,089
Number of Sequences: 336
Number of extensions: 5114
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 33197234
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)