Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_P14
(1142 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical pr... 75 7e-14
AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical ... 75 7e-14
AF250925-1|AAF74721.1| 542|Caenorhabditis elegans PNGase protein. 75 7e-14
AC006603-6|ABB51200.1| 534|Caenorhabditis elegans Hypothetical ... 33 0.38
AL117203-3|CAB55101.1| 448|Caenorhabditis elegans Hypothetical ... 32 0.66
U89792-1|AAB94380.1| 339|Caenorhabditis elegans seven-in-absent... 30 3.5
AC024759-5|AAK68432.1| 419|Caenorhabditis elegans Hypothetical ... 30 3.5
Z72511-6|CAA96659.2| 391|Caenorhabditis elegans Hypothetical pr... 29 6.1
>Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical protein
F56G4.5 protein.
Length = 606
Score = 75.4 bits (177), Expect = 7e-14
Identities = 42/117 (35%), Positives = 53/117 (45%), Gaps = 5/117 (4%)
Frame = +2
Query: 737 DTALLMELLDWFKHDFFKWVDKPDCDLCGER-TVNHENAIMTIE----GETCRVELYQCT 901
+ A+L +LL WFK FF W D+P C C + + + T E G RVE+Y C
Sbjct: 167 EKAILKDLLHWFKTQFFTWFDRPTCPKCTLKCSTDGLQGTPTREEQKEGGASRVEVYICD 226
Query: 902 VCEGGXAMXPRYNNLRTWLXTRSGRCGXWXQXLYXAGPXXGLRXXYVYDVPDXXWXE 1072
C PRYNN L TR+GRCG W L ++YD D W E
Sbjct: 227 GCNTEMRF-PRYNNPAKLLQTRTGRCGEWANCFGLLLAALNLESRFIYDTTDHVWNE 282
>AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 75.4 bits (177), Expect = 7e-14
Identities = 42/117 (35%), Positives = 53/117 (45%), Gaps = 5/117 (4%)
Frame = +2
Query: 737 DTALLMELLDWFKHDFFKWVDKPDCDLCGER-TVNHENAIMTIE----GETCRVELYQCT 901
+ A+L +LL WFK FF W D+P C C + + + T E G RVE+Y C
Sbjct: 167 EKAILKDLLHWFKTQFFTWFDRPTCPKCTLKCSTDGLQGTPTREEQKEGGASRVEVYICD 226
Query: 902 VCEGGXAMXPRYNNLRTWLXTRSGRCGXWXQXLYXAGPXXGLRXXYVYDVPDXXWXE 1072
C PRYNN L TR+GRCG W L ++YD D W E
Sbjct: 227 GCNTEMRF-PRYNNPAKLLQTRTGRCGEWANCFGLLLAALNLESRFIYDTTDHVWNE 282
>AF250925-1|AAF74721.1| 542|Caenorhabditis elegans PNGase protein.
Length = 542
Score = 75.4 bits (177), Expect = 7e-14
Identities = 42/117 (35%), Positives = 53/117 (45%), Gaps = 5/117 (4%)
Frame = +2
Query: 737 DTALLMELLDWFKHDFFKWVDKPDCDLCGER-TVNHENAIMTIE----GETCRVELYQCT 901
+ A+L +LL WFK FF W D+P C C + + + T E G RVE+Y C
Sbjct: 103 EKAILKDLLHWFKTQFFTWFDRPTCPKCTLKCSTDGLQGTPTREEQKEGGASRVEVYICD 162
Query: 902 VCEGGXAMXPRYNNLRTWLXTRSGRCGXWXQXLYXAGPXXGLRXXYVYDVPDXXWXE 1072
C PRYNN L TR+GRCG W L ++YD D W E
Sbjct: 163 GCNTEMRF-PRYNNPAKLLQTRTGRCGEWANCFGLLLAALNLESRFIYDTTDHVWNE 218
>AC006603-6|ABB51200.1| 534|Caenorhabditis elegans Hypothetical
protein B0524.1 protein.
Length = 534
Score = 33.1 bits (72), Expect = 0.38
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 13/129 (10%)
Frame = +2
Query: 476 RPIPVNSTDVR-EQPKASPVHSLQTKNRFLLKIQD--LFNGMQVYED-EDLLAHARDQIP 643
RP N + +PK S L+ K R ++ D L + D ++L++ R Q
Sbjct: 209 RPKTKNQRKIEFRRPKTSKNRKLRLKIRPRVRFIDRKLIRRRECLVDPQNLISWIRRQEK 268
Query: 644 LVTLQLMA--LDRVREQQKKIKMGEIKA-----NDLPFDTALLMELLDWFKHDFFKW--V 796
L++ R++EQQ+ + +I+A +D+ D +L ME+LD KH W V
Sbjct: 269 AENLRIFQEKQKRLQEQQEDAEWEQIEAQRANSDDVIEDKSLKMEVLDIVKHKNRNWIVV 328
Query: 797 DKPDCDLCG 823
+K C++ G
Sbjct: 329 EKKGCEIQG 337
>AL117203-3|CAB55101.1| 448|Caenorhabditis elegans Hypothetical
protein Y48C3A.4 protein.
Length = 448
Score = 32.3 bits (70), Expect = 0.66
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 809 CDLCGERTVNHENAIMTIEGETCRVELYQCTVC 907
C +C ++ NHENA+ E YQC +C
Sbjct: 262 CGICRKKVENHENAMAVHVAEHADAGCYQCRLC 294
>U89792-1|AAB94380.1| 339|Caenorhabditis elegans seven-in-absentia
protein homologue-1 protein.
Length = 339
Score = 29.9 bits (64), Expect = 3.5
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2
Query: 254 ILENPHDYELRSI--KKNVFKDLSKLDSFNEYMKYIGFKSVDNEFTYPKELSFSKLRMAQ 427
++++ DY + K+ + F ++ IG K + F Y ELS S+ RM+
Sbjct: 229 MMQSCFDYNFMLVLEKQEKYDPAQPTQMFYAVVQLIGSKKEADNFVYRLELSASRRRMSW 288
Query: 428 VAIERKLH 451
A R +H
Sbjct: 289 EATPRSIH 296
>AC024759-5|AAK68432.1| 419|Caenorhabditis elegans Hypothetical
protein Y37E11AR.2 protein.
Length = 419
Score = 29.9 bits (64), Expect = 3.5
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2
Query: 254 ILENPHDYELRSI--KKNVFKDLSKLDSFNEYMKYIGFKSVDNEFTYPKELSFSKLRMAQ 427
++++ DY + K+ + F ++ IG K + F Y ELS S+ RM+
Sbjct: 295 MMQSCFDYNFMLVLEKQEKYDPAQPTQMFYAVVQLIGSKKEADNFVYRLELSASRRRMSW 354
Query: 428 VAIERKLH 451
A R +H
Sbjct: 355 EATPRSIH 362
>Z72511-6|CAA96659.2| 391|Caenorhabditis elegans Hypothetical
protein F55A11.5 protein.
Length = 391
Score = 29.1 bits (62), Expect = 6.1
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 338 EYMKYIGFKSVDNEFTYPKELSFSKLRMA-QVAIERKLHFCCGSVPIRPIPVNSTD 502
EY++YI D YP + S++ + + A R++HF +PI +P+N D
Sbjct: 219 EYVEYI----YDITIAYPYNIVQSEIDLVLKGASPREVHFHIRKIPISQVPLNEQD 270
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,437,065
Number of Sequences: 27780
Number of extensions: 493703
Number of successful extensions: 1110
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3099034026
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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