Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_P13
(1158 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein... 99 5e-21
AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily a... 71 2e-12
AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily a... 71 2e-12
AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical ... 71 2e-12
Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical p... 69 6e-12
Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical pr... 69 6e-12
Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical pr... 69 6e-12
Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical pr... 69 6e-12
Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical pr... 69 6e-12
Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical pr... 69 6e-12
Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical pr... 67 3e-11
AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical ... 62 7e-10
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 62 1e-09
Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical pr... 58 9e-09
AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical... 58 9e-09
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 56 4e-08
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 56 4e-08
Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-lik... 50 2e-06
Z71258-13|CAN86573.1| 582|Caenorhabditis elegans Hypothetical p... 49 5e-06
Z71258-6|CAA95779.1| 636|Caenorhabditis elegans Hypothetical pr... 49 5e-06
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr... 49 7e-06
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p... 49 7e-06
U61952-7|AAB03164.1| 1042|Caenorhabditis elegans Abnormal cell l... 34 0.17
AF163018-1|AAD49323.1| 1042|Caenorhabditis elegans bromodomain p... 34 0.17
Z19152-9|CAC35809.1| 364|Caenorhabditis elegans Hypothetical pr... 29 4.7
U29082-5|AAA68403.1| 210|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF133832-1|AAD32265.1| 221|Caenorhabditis elegans NIP3 protein. 29 4.7
AF080583-1|AAC31574.1| 210|Caenorhabditis elegans Bcl-2/adenovi... 29 4.7
U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain (pr... 29 6.2
>U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein 1
protein.
Length = 1376
Score = 99.1 bits (236), Expect = 5e-21
Identities = 43/97 (44%), Positives = 65/97 (67%)
Frame = +3
Query: 408 QFCKNLLCEMECHEHAWPFLLPVNNKQFPQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFA 587
+ C+ +L E+ +A PFL PVN K P YK +I PMDL TI++K + Y+ E+FA
Sbjct: 1266 ELCQLMLDELVVQANALPFLEPVNPKLVPGYKMIISKPMDLKTIRQKNEKLIYETPEDFA 1325
Query: 588 SDVRLIFSNCEVFNEDYSPVGRAGHNMRQFFEEKWTQ 698
D+ L+F+NC FN D+S +GRAG ++ +FF+++W Q
Sbjct: 1326 EDIELMFANCRQFNIDHSEIGRAGISLHKFFQKRWKQ 1362
>AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform b protein.
Length = 765
Score = 70.5 bits (165), Expect = 2e-12
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Frame = +3
Query: 447 EHAWPFLLPVNNKQFP--QYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNCE 620
E AWPF PV+ +Q Y K+IK PMDL ++K K++ +YK +F DVRL+ NC
Sbjct: 280 EFAWPFNEPVDAEQLGLHDYHKIIKEPMDLKSMKAKMESGAYKEPSDFEHDVRLMLRNCF 339
Query: 621 VFNEDYSPVGRAGHNMRQFFEEKWTQ 698
++N PV G ++ F+ +W +
Sbjct: 340 LYNPVGDPVHSFGLRFQEVFDRRWAE 365
Score = 61.7 bits (143), Expect = 1e-09
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = +3
Query: 423 LLCEMECHEHAWPFLLPVNNKQF--PQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDV 596
+L E H+H WPF PV+ P Y + + PMDL TI+ +L+ + Y C +E D+
Sbjct: 51 VLKEAGKHKHVWPFQKPVDAVALCIPLYHERVARPMDLKTIENRLKSTYYTCAQECIDDI 110
Query: 597 RLIFSNCEVFNEDYSPVGRAGHNMRQFFEEKWTQS 701
+F NC FN V N+ + ++ Q+
Sbjct: 111 ETVFQNCYTFNGKEDDVTIMAQNVHEVIKKSLEQA 145
>AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform a protein.
Length = 851
Score = 70.5 bits (165), Expect = 2e-12
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Frame = +3
Query: 447 EHAWPFLLPVNNKQFP--QYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNCE 620
E AWPF PV+ +Q Y K+IK PMDL ++K K++ +YK +F DVRL+ NC
Sbjct: 280 EFAWPFNEPVDAEQLGLHDYHKIIKEPMDLKSMKAKMESGAYKEPSDFEHDVRLMLRNCF 339
Query: 621 VFNEDYSPVGRAGHNMRQFFEEKWTQ 698
++N PV G ++ F+ +W +
Sbjct: 340 LYNPVGDPVHSFGLRFQEVFDRRWAE 365
Score = 61.7 bits (143), Expect = 1e-09
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = +3
Query: 423 LLCEMECHEHAWPFLLPVNNKQF--PQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDV 596
+L E H+H WPF PV+ P Y + + PMDL TI+ +L+ + Y C +E D+
Sbjct: 51 VLKEAGKHKHVWPFQKPVDAVALCIPLYHERVARPMDLKTIENRLKSTYYTCAQECIDDI 110
Query: 597 RLIFSNCEVFNEDYSPVGRAGHNMRQFFEEKWTQS 701
+F NC FN V N+ + ++ Q+
Sbjct: 111 ETVFQNCYTFNGKEDDVTIMAQNVHEVIKKSLEQA 145
>AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical
protein H20J04.2 protein.
Length = 1427
Score = 70.5 bits (165), Expect = 2e-12
Identities = 33/91 (36%), Positives = 51/91 (56%)
Frame = +3
Query: 417 KNLLCEMECHEHAWPFLLPVNNKQFPQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDV 596
+ LL E E +WPFL PV++K+ P Y VIK PM+L T+ K++ Y E +D
Sbjct: 1330 ETLLKEAMRQECSWPFLQPVDSKEVPDYYDVIKRPMNLRTMMNKIKQRIYNKPIEVRNDF 1389
Query: 597 RLIFSNCEVFNEDYSPVGRAGHNMRQFFEEK 689
+LI SNCE +NE + + + + F ++
Sbjct: 1390 QLILSNCETYNEPENEIYKLSRELHDFMADR 1420
>Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical
protein F26H11.2g protein.
Length = 413
Score = 68.9 bits (161), Expect = 6e-12
Identities = 31/82 (37%), Positives = 49/82 (59%)
Frame = +3
Query: 444 HEHAWPFLLPVNNKQFPQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNCEV 623
H + PF PV+ +FP Y+K IK PMDLSTI KK++ + Y +F +DV +F N +
Sbjct: 268 HRMSTPFRNPVDLNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQFVNDVNQMFENAKT 327
Query: 624 FNEDYSPVGRAGHNMRQFFEEK 689
+N + V + M++ F++K
Sbjct: 328 YNPKGNAVFKCAETMQEVFDKK 349
>Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical protein
F26H11.2c protein.
Length = 2266
Score = 68.9 bits (161), Expect = 6e-12
Identities = 31/82 (37%), Positives = 49/82 (59%)
Frame = +3
Query: 444 HEHAWPFLLPVNNKQFPQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNCEV 623
H + PF PV+ +FP Y+K IK PMDLSTI KK++ + Y +F +DV +F N +
Sbjct: 2121 HRMSTPFRNPVDLNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQFVNDVNQMFENAKT 2180
Query: 624 FNEDYSPVGRAGHNMRQFFEEK 689
+N + V + M++ F++K
Sbjct: 2181 YNPKGNAVFKCAETMQEVFDKK 2202
>Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical
protein F26H11.2d protein.
Length = 692
Score = 68.9 bits (161), Expect = 6e-12
Identities = 31/82 (37%), Positives = 49/82 (59%)
Frame = +3
Query: 444 HEHAWPFLLPVNNKQFPQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNCEV 623
H + PF PV+ +FP Y+K IK PMDLSTI KK++ + Y +F +DV +F N +
Sbjct: 547 HRMSTPFRNPVDLNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQFVNDVNQMFENAKT 606
Query: 624 FNEDYSPVGRAGHNMRQFFEEK 689
+N + V + M++ F++K
Sbjct: 607 YNPKGNAVFKCAETMQEVFDKK 628
>Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical
protein F26H11.2f protein.
Length = 510
Score = 68.9 bits (161), Expect = 6e-12
Identities = 31/82 (37%), Positives = 49/82 (59%)
Frame = +3
Query: 444 HEHAWPFLLPVNNKQFPQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNCEV 623
H + PF PV+ +FP Y+K IK PMDLSTI KK++ + Y +F +DV +F N +
Sbjct: 365 HRMSTPFRNPVDLNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQFVNDVNQMFENAKT 424
Query: 624 FNEDYSPVGRAGHNMRQFFEEK 689
+N + V + M++ F++K
Sbjct: 425 YNPKGNAVFKCAETMQEVFDKK 446
>Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical
protein F26H11.2e protein.
Length = 405
Score = 68.9 bits (161), Expect = 6e-12
Identities = 31/82 (37%), Positives = 49/82 (59%)
Frame = +3
Query: 444 HEHAWPFLLPVNNKQFPQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNCEV 623
H + PF PV+ +FP Y+K IK PMDLSTI KK++ + Y +F +DV +F N +
Sbjct: 260 HRMSTPFRNPVDLNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQFVNDVNQMFENAKT 319
Query: 624 FNEDYSPVGRAGHNMRQFFEEK 689
+N + V + M++ F++K
Sbjct: 320 YNPKGNAVFKCAETMQEVFDKK 341
>Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical
protein F57C7.1b protein.
Length = 1087
Score = 68.9 bits (161), Expect = 6e-12
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Frame = +3
Query: 444 HEHAWPFLLPVN--NKQFPQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNC 617
H+H+WPF LPV+ + P+Y ++ PMDL TI+K+L++ Y C E+ D+ +F NC
Sbjct: 301 HKHSWPFQLPVDAIKLEIPEYHNIVNTPMDLRTIEKRLRNLYYWCAEDAIKDLNTLFDNC 360
Query: 618 EVFNE 632
+ FN+
Sbjct: 361 KKFND 365
Score = 66.5 bits (155), Expect = 3e-11
Identities = 39/100 (39%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Frame = +3
Query: 408 QFCKNLLCEMECHEH---AWPFLLPVN--NKQFPQYKKVIKCPMDLSTIKKKLQDSSYKC 572
+FC LL E+ ++ A F LPV+ + Y +VI PMDL TIKKKL Y
Sbjct: 558 KFCSKLLNEIHSVKNKGFAQVFYLPVDPIKLKIYDYLEVITNPMDLQTIKKKLDFKQYAE 617
Query: 573 KEEFASDVRLIFSNCEVFNEDYSPVGRAGHNMRQFFEEKW 692
EEF D+ L+ NC +N SP +R FFE++W
Sbjct: 618 PEEFVHDINLMVDNCCKYNPKGSPAHSNALELRSFFEQRW 657
>Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical
protein F57C7.1a protein.
Length = 1209
Score = 66.9 bits (156), Expect = 3e-11
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Frame = +3
Query: 444 HEHAWPFLLPVN--NKQFPQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNC 617
H+H+WPF LPV+ + P+Y ++ PMDL TI+K+L++ Y C E+ D+ +F NC
Sbjct: 301 HKHSWPFQLPVDAIKLEIPEYHNIVNTPMDLRTIEKRLRNLYYWCAEDAIKDINQVFINC 360
Query: 618 EVFN 629
FN
Sbjct: 361 YSFN 364
Score = 66.5 bits (155), Expect = 3e-11
Identities = 39/100 (39%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Frame = +3
Query: 408 QFCKNLLCEMECHEH---AWPFLLPVN--NKQFPQYKKVIKCPMDLSTIKKKLQDSSYKC 572
+FC LL E+ ++ A F LPV+ + Y +VI PMDL TIKKKL Y
Sbjct: 558 KFCSKLLNEIHSVKNKGFAQVFYLPVDPIKLKIYDYLEVITNPMDLQTIKKKLDFKQYAE 617
Query: 573 KEEFASDVRLIFSNCEVFNEDYSPVGRAGHNMRQFFEEKW 692
EEF D+ L+ NC +N SP +R FFE++W
Sbjct: 618 PEEFVHDINLMVDNCCKYNPKGSPAHSNALELRSFFEQRW 657
>AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical
protein F13C5.2 protein.
Length = 374
Score = 62.1 bits (144), Expect = 7e-10
Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Frame = +3
Query: 414 CKNLLCEMECHEH---AWPFLLPVNNKQF--PQYKKVIKCPMDLSTIKKKLQDSSYKCKE 578
C ++L E E H +PF PV+ Y +VIK PMD+STI+KKL Y
Sbjct: 122 CLSILKEFEKSTHDSFTFPFRKPVDVVLLGLTDYHEVIKKPMDMSTIRKKLIGEEYDTAV 181
Query: 579 EFASDVRLIFSNCEVFNEDYSPVGRAGHNMRQFFEEKW 692
EF D +L+ +NC +N + PV R+ F KW
Sbjct: 182 EFKEDFKLMINNCLTYNNEGDPVADFALQFRKKFAAKW 219
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 61.7 bits (143), Expect = 1e-09
Identities = 27/84 (32%), Positives = 50/84 (59%)
Frame = +3
Query: 423 LLCEMECHEHAWPFLLPVNNKQFPQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRL 602
+L ++ ++AWPF PV+ K+ P+Y IK P+D T+++KL+ +Y + F +D+
Sbjct: 658 ILKKLTADKNAWPFASPVDVKEVPEYYDHIKHPIDFKTMQEKLKRKAYTHQHLFIADLNR 717
Query: 603 IFSNCEVFNEDYSPVGRAGHNMRQ 674
+F NC VFN + + G+ + +
Sbjct: 718 LFQNCYVFNGAEAVYYKYGYKLNE 741
>Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical protein
W04A8.7 protein.
Length = 1792
Score = 58.4 bits (135), Expect = 9e-09
Identities = 25/71 (35%), Positives = 42/71 (59%)
Frame = +3
Query: 462 FLLPVNNKQFPQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNCEVFNEDYS 641
F+ PVN+K+ Y +IK P+ L IKKK+ + SY +++F D++L+F N ++N D +
Sbjct: 1481 FVTPVNSKKVVDYYNIIKNPISLQEIKKKISEQSYLLRKDFLDDIKLMFDNSRMYNGDNN 1540
Query: 642 PVGRAGHNMRQ 674
+ M Q
Sbjct: 1541 ILTLTAQQMLQ 1551
Score = 44.4 bits (100), Expect = 2e-04
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +3
Query: 474 VNNKQFPQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNCEVFN 629
V+ K+ P Y I PMDLS +++K + YK +EF D I++N VFN
Sbjct: 1607 VDPKKIPAYYLKISDPMDLSIMEQKSKSQEYKSIDEFLKDAEKIYTNSVVFN 1658
>AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 58.4 bits (135), Expect = 9e-09
Identities = 25/71 (35%), Positives = 42/71 (59%)
Frame = +3
Query: 462 FLLPVNNKQFPQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNCEVFNEDYS 641
F+ PVN+K+ Y +IK P+ L IKKK+ + SY +++F D++L+F N ++N D +
Sbjct: 1481 FVTPVNSKKVVDYYNIIKNPISLQEIKKKISEQSYLLRKDFLDDIKLMFDNSRMYNGDNN 1540
Query: 642 PVGRAGHNMRQ 674
+ M Q
Sbjct: 1541 ILTLTAQQMLQ 1551
Score = 44.4 bits (100), Expect = 2e-04
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +3
Query: 474 VNNKQFPQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNCEVFN 629
V+ K+ P Y I PMDLS +++K + YK +EF D I++N VFN
Sbjct: 1607 VDPKKIPAYYLKISDPMDLSIMEQKSKSQEYKSIDEFLKDAEKIYTNSVVFN 1658
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical protein
R10E11.1b protein.
Length = 2056
Score = 56.4 bits (130), Expect = 4e-08
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Frame = +3
Query: 432 EMECHEHAWPFLLPVNNK--QFPQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLI 605
+++ E A PF +PV+ K P Y ++IK PMDL T+ KKL Y+ +F D+ L+
Sbjct: 879 KLDKSEDAAPFRVPVDAKLLNIPDYHEIIKRPMDLETVHKKLYAGQYQNAGQFCDDIWLM 938
Query: 606 FSNCEVFNEDYSPVGRAGHNMRQFF 680
N ++N S V + G + + F
Sbjct: 939 LDNAWLYNRKNSKVYKYGLKLSEMF 963
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical protein
R10E11.1a protein.
Length = 2045
Score = 56.4 bits (130), Expect = 4e-08
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Frame = +3
Query: 432 EMECHEHAWPFLLPVNNK--QFPQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLI 605
+++ E A PF +PV+ K P Y ++IK PMDL T+ KKL Y+ +F D+ L+
Sbjct: 868 KLDKSEDAAPFRVPVDAKLLNIPDYHEIIKRPMDLETVHKKLYAGQYQNAGQFCDDIWLM 927
Query: 606 FSNCEVFNEDYSPVGRAGHNMRQFF 680
N ++N S V + G + + F
Sbjct: 928 LDNAWLYNRKNSKVYKYGLKLSEMF 952
>Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/70 (30%), Positives = 39/70 (55%)
Frame = +3
Query: 483 KQFPQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNCEVFNEDYSPVGRAGH 662
K+ P Y +VI PMD I KK++ Y EE D+ L+ +N + +NE+ S + +
Sbjct: 1215 KELPDYYQVISKPMDFDRINKKIETGRYTVMEELNDDMNLLVNNAQTYNEEGSEIYVSSE 1274
Query: 663 NMRQFFEEKW 692
+ + ++E++
Sbjct: 1275 TIGKLWKEQY 1284
>Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/70 (30%), Positives = 39/70 (55%)
Frame = +3
Query: 483 KQFPQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNCEVFNEDYSPVGRAGH 662
K+ P Y +VI PMD I KK++ Y EE D+ L+ +N + +NE+ S + +
Sbjct: 1215 KELPDYYQVISKPMDFDRINKKIETGRYTVMEELNDDMNLLVNNAQTYNEEGSEIYVSSE 1274
Query: 663 NMRQFFEEKW 692
+ + ++E++
Sbjct: 1275 TIGKLWKEQY 1284
>AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-like
protein protein.
Length = 1474
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/70 (30%), Positives = 39/70 (55%)
Frame = +3
Query: 483 KQFPQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNCEVFNEDYSPVGRAGH 662
K+ P Y +VI PMD I KK++ Y EE D+ L+ +N + +NE+ S + +
Sbjct: 1215 KELPDYYQVISKPMDFDRINKKIETGRYTVMEELNDDMNLLVNNAQTYNEEGSEIYVSSE 1274
Query: 663 NMRQFFEEKW 692
+ + ++E++
Sbjct: 1275 TIGKLWKEQY 1284
>Z71258-13|CAN86573.1| 582|Caenorhabditis elegans Hypothetical
protein C01H6.7b protein.
Length = 582
Score = 49.2 bits (112), Expect = 5e-06
Identities = 28/98 (28%), Positives = 39/98 (39%)
Frame = +3
Query: 339 ENVPAPPRXXXXXXXXXXXXXXXQFCKNLLCEMECHEHAWPFLLPVNNKQFPQYKKVIKC 518
E P PPR L E + ++ F PV P Y+ +IK
Sbjct: 134 EPTPPPPRKAPSFSSYLPIQLMQDHILRKLVEKDPEQY---FAFPVTPSMAPDYRDIIKT 190
Query: 519 PMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNCEVFNE 632
PMDL TI++ ++D Y D LI SN +N+
Sbjct: 191 PMDLQTIRENIEDGKYASLPAMKEDCELIVSNAFQYNQ 228
>Z71258-6|CAA95779.1| 636|Caenorhabditis elegans Hypothetical
protein C01H6.7 protein.
Length = 636
Score = 49.2 bits (112), Expect = 5e-06
Identities = 28/98 (28%), Positives = 39/98 (39%)
Frame = +3
Query: 339 ENVPAPPRXXXXXXXXXXXXXXXQFCKNLLCEMECHEHAWPFLLPVNNKQFPQYKKVIKC 518
E P PPR L E + ++ F PV P Y+ +IK
Sbjct: 134 EPTPPPPRKAPSFSSYLPIQLMQDHILRKLVEKDPEQY---FAFPVTPSMAPDYRDIIKT 190
Query: 519 PMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNCEVFNE 632
PMDL TI++ ++D Y D LI SN +N+
Sbjct: 191 PMDLQTIRENIEDGKYASLPAMKEDCELIVSNAFQYNQ 228
>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 48.8 bits (111), Expect = 7e-06
Identities = 22/68 (32%), Positives = 39/68 (57%)
Frame = +3
Query: 444 HEHAWPFLLPVNNKQFPQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNCEV 623
H A F+ + KQ+P+Y ++I+ P+D+ TI+ ++ Y + +D R++FSN
Sbjct: 554 HWPAGAFIQLPSAKQYPEYYQIIQNPIDMKTIRMRIDGHQYPQVDAMINDCRVMFSNARD 613
Query: 624 FNEDYSPV 647
FNE S +
Sbjct: 614 FNEPRSMI 621
Score = 46.8 bits (106), Expect = 3e-05
Identities = 31/104 (29%), Positives = 51/104 (49%)
Frame = +3
Query: 462 FLLPVNNKQFPQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNCEVFNEDYS 641
F+ + ++FP Y VIK PMD+ IK KL++ Y + SD L+ SN FNE S
Sbjct: 737 FMRLPSKEEFPAYYDVIKKPMDMMRIKHKLENRQYVTLLDVVSDFMLMLSNACKFNETDS 796
Query: 642 PVGRAGHNMRQFFEEKWTQS*NLTGER*PQTRTRCRLAQASLVA 773
+ + ++++ E + TG+ P+ + R S+ A
Sbjct: 797 DIYKEAVSLQKALLEMKREL--DTGDDAPRVQVELRTIFTSIFA 838
Score = 42.7 bits (96), Expect = 5e-04
Identities = 21/77 (27%), Positives = 39/77 (50%)
Frame = +3
Query: 459 PFLLPVNNKQFPQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNCEVFNEDY 638
PF + + + FP Y + I P+DL TI + + Y +E D+ L+F N + F+ +
Sbjct: 217 PFRVLQSREDFPLYYEKIAKPIDLKTIAQNGVNKKYSTMKELKDDLFLLFKNAQQFSGNG 276
Query: 639 SPVGRAGHNMRQFFEEK 689
S + + ++ +EK
Sbjct: 277 SDIFKDAEQLKTVVKEK 293
Score = 35.9 bits (79), Expect = 0.054
Identities = 17/64 (26%), Positives = 34/64 (53%)
Frame = +3
Query: 492 PQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNCEVFNEDYSPVGRAGHNMR 671
P+Y + +K P+D++TI+ KL+ Y ++F D + N + +D S + ++
Sbjct: 79 PEYYEQVKEPIDVTTIQHKLKIPEYLTYDQFNDDFMMFIKNNLTYYKDESEEHKDMMKIQ 138
Query: 672 QFFE 683
+ FE
Sbjct: 139 ELFE 142
>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 48.8 bits (111), Expect = 7e-06
Identities = 22/68 (32%), Positives = 39/68 (57%)
Frame = +3
Query: 444 HEHAWPFLLPVNNKQFPQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNCEV 623
H A F+ + KQ+P+Y ++I+ P+D+ TI+ ++ Y + +D R++FSN
Sbjct: 554 HWPAGAFIQLPSAKQYPEYYQIIQNPIDMKTIRMRIDGHQYPQVDAMINDCRVMFSNARD 613
Query: 624 FNEDYSPV 647
FNE S +
Sbjct: 614 FNEPRSMI 621
Score = 46.8 bits (106), Expect = 3e-05
Identities = 31/104 (29%), Positives = 51/104 (49%)
Frame = +3
Query: 462 FLLPVNNKQFPQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNCEVFNEDYS 641
F+ + ++FP Y VIK PMD+ IK KL++ Y + SD L+ SN FNE S
Sbjct: 737 FMRLPSKEEFPAYYDVIKKPMDMMRIKHKLENRQYVTLLDVVSDFMLMLSNACKFNETDS 796
Query: 642 PVGRAGHNMRQFFEEKWTQS*NLTGER*PQTRTRCRLAQASLVA 773
+ + ++++ E + TG+ P+ + R S+ A
Sbjct: 797 DIYKEAVSLQKALLEMKREL--DTGDDAPRVQVELRTIFTSIFA 838
Score = 42.7 bits (96), Expect = 5e-04
Identities = 21/77 (27%), Positives = 39/77 (50%)
Frame = +3
Query: 459 PFLLPVNNKQFPQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNCEVFNEDY 638
PF + + + FP Y + I P+DL TI + + Y +E D+ L+F N + F+ +
Sbjct: 217 PFRVLQSREDFPLYYEKIAKPIDLKTIAQNGVNKKYSTMKELKDDLFLLFKNAQQFSGNG 276
Query: 639 SPVGRAGHNMRQFFEEK 689
S + + ++ +EK
Sbjct: 277 SDIFKDAEQLKTVVKEK 293
Score = 35.9 bits (79), Expect = 0.054
Identities = 17/64 (26%), Positives = 34/64 (53%)
Frame = +3
Query: 492 PQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNCEVFNEDYSPVGRAGHNMR 671
P+Y + +K P+D++TI+ KL+ Y ++F D + N + +D S + ++
Sbjct: 79 PEYYEQVKEPIDVTTIQHKLKIPEYLTYDQFNDDFMMFIKNNLTYYKDESEEHKDMMKIQ 138
Query: 672 QFFE 683
+ FE
Sbjct: 139 ELFE 142
>U61952-7|AAB03164.1| 1042|Caenorhabditis elegans Abnormal cell
lineage protein 49 protein.
Length = 1042
Score = 34.3 bits (75), Expect = 0.17
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +3
Query: 498 YKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNCEVFNEDYSPVGRAGHNMRQ 674
Y +I+ P+ L + +K Y ++DV+L+ SNC FN+ + G+ R+
Sbjct: 543 YTDIIENPICLKDMSEKAASGKYSTVAALSADVQLMLSNCATFNKGNRVYIKYGNTYRK 601
>AF163018-1|AAD49323.1| 1042|Caenorhabditis elegans bromodomain
protein LIN-49 protein.
Length = 1042
Score = 34.3 bits (75), Expect = 0.17
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +3
Query: 498 YKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNCEVFNEDYSPVGRAGHNMRQ 674
Y +I+ P+ L + +K Y ++DV+L+ SNC FN+ + G+ R+
Sbjct: 543 YTDIIENPICLKDMSEKAASGKYSTVAALSADVQLMLSNCATFNKGNRVYIKYGNTYRK 601
>Z19152-9|CAC35809.1| 364|Caenorhabditis elegans Hypothetical
protein B0464.9 protein.
Length = 364
Score = 29.5 bits (63), Expect = 4.7
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 546 KLQDSSYKCKEEFASDVRLIFSNCEVFNEDYSPVGRAGHNM 668
K D KE D+ IF N +F ED SPV GH+M
Sbjct: 127 KCSDEHDLSKETQIKDIGAIFKN--IFGEDDSPVCIVGHSM 165
>U29082-5|AAA68403.1| 210|Caenorhabditis elegans Hypothetical
protein C14F5.1a protein.
Length = 210
Score = 29.5 bits (63), Expect = 4.7
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -1
Query: 441 TPSRRAGSCKTVVPLRVSWPNSSLSWLGEAPER 343
TPS +A S + PL S P S SW+ AP R
Sbjct: 35 TPSAKAVSNPFITPLTESTPGMSESWVELAPSR 67
>AF133832-1|AAD32265.1| 221|Caenorhabditis elegans NIP3 protein.
Length = 221
Score = 29.5 bits (63), Expect = 4.7
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -1
Query: 441 TPSRRAGSCKTVVPLRVSWPNSSLSWLGEAPER 343
TPS +A S + PL S P S SW+ AP R
Sbjct: 46 TPSAKAVSNPFITPLTESTPGMSESWVELAPSR 78
>AF080583-1|AAC31574.1| 210|Caenorhabditis elegans Bcl-2/adenovirus
E1B 19K-interactingprotein 3 protein.
Length = 210
Score = 29.5 bits (63), Expect = 4.7
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -1
Query: 441 TPSRRAGSCKTVVPLRVSWPNSSLSWLGEAPER 343
TPS +A S + PL S P S SW+ AP R
Sbjct: 35 TPSAKAVSNPFITPLTESTPGMSESWVELAPSR 67
>U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 7 protein.
Length = 491
Score = 29.1 bits (62), Expect = 6.2
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 465 LLPVNNKQFPQYKKVIKCPMDLSTIKKKLQDSSY-KCKEE 581
L P + +P YKK+ K L ++KKK+++S + C EE
Sbjct: 237 LNPDHKSCYPFYKKLRKVVKSLESMKKKVENSDWMACLEE 276
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,705,543
Number of Sequences: 27780
Number of extensions: 295995
Number of successful extensions: 714
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3151206316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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