Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_P12
         (1148 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...    84   6e-15
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...    83   2e-14
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi...    67   7e-10
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0...    62   2e-08
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ...    54   5e-06
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0...    50   1e-04
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ...    46   0.002
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ...    41   0.052

>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 147

 Score = 84.2 bits (199), Expect = 6e-15
 Identities = 54/120 (45%), Positives = 61/120 (50%)
 Frame = +3

Query: 426 RGKXVXXXGALPFPRSXTRCARSFGXGKXYQXTQRXXXGYPXNQGITQEKXXXQKAXKRP 605
           R   +   G +P PRS TR ARSFG G+ Y+ T           G        +K   + 
Sbjct: 26  RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD----------GDGNFLEDTRKTLSKE 75

Query: 606 ETVKRPXXWXFXXGSAPLTSIXKIXAQXKGGXTRXDYKNTRXFPLXAPSXALLFRPCRLP 785
           E   RP    F  GSAPLTSI K  AQ  GG TR DYK+ R FPL APS ALLF P  LP
Sbjct: 76  EI--RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133


>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
           root|Rep: Putative uncharacterized protein - Salmonella
           typhimurium
          Length = 127

 Score = 82.6 bits (195), Expect = 2e-14
 Identities = 39/56 (69%), Positives = 42/56 (75%)
 Frame = +3

Query: 636 FXXGSAPLTSIXKIXAQXKGGXTRXDYKNTRXFPLXAPSXALLFRPCRLPEYLSAF 803
           F  GSAPLTSI KI AQ +GG TR DYK+TR FPL APS ALLFRPCRLP+    F
Sbjct: 16  FSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPF 71



 Score = 75.8 bits (178), Expect = 2e-12
 Identities = 37/70 (52%), Positives = 39/70 (55%)
 Frame = +1

Query: 736 PXKLPRXLSCSDPAVYRNTCPPFSLREAWXFLIXHAVGISXRGRSXAPXWXGXKNPXXXP 915
           P + P       P    +TCPPFSLREAW FLI HAVGIS R RS AP W    NP   P
Sbjct: 49  PLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSP 108

Query: 916 TXGPYXXXIV 945
           T  PY   IV
Sbjct: 109 TAAPYPVTIV 118


>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
           organisms|Rep: Predicted protein - Nematostella
           vectensis
          Length = 97

 Score = 67.3 bits (157), Expect = 7e-10
 Identities = 34/54 (62%), Positives = 36/54 (66%)
 Frame = +3

Query: 612 VKRPXXWXFXXGSAPLTSIXKIXAQXKGGXTRXDYKNTRXFPLXAPSXALLFRP 773
           V+ P    F  GSAPLTSI K  AQ  GG TR DYK+TR FPL APS ALLF P
Sbjct: 44  VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97


>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
           CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
           BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
           Citrobacter koseri ATCC BAA-895
          Length = 125

 Score = 62.5 bits (145), Expect = 2e-08
 Identities = 35/72 (48%), Positives = 38/72 (52%)
 Frame = +1

Query: 715 IKIPGVSPXKLPRXLSCSDPAVYRNTCPPFSLREAWXFLIXHAVGISXRGRSXAPXWXGX 894
           +KI  VS   LP  LSCS+PAV R   PPFSL  +         GIS R RS AP W   
Sbjct: 32  LKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCRSFAPSWAVS 91

Query: 895 KNPXXXPTXGPY 930
           KNP   PT  PY
Sbjct: 92  KNPPFSPTAAPY 103


>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
           Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
           Beggiatoa sp. SS
          Length = 114

 Score = 54.4 bits (125), Expect = 5e-06
 Identities = 28/77 (36%), Positives = 39/77 (50%)
 Frame = +3

Query: 543 YPXNQGITQEKXXXQKAXKRPETVKRPXXWXFXXGSAPLTSIXKIXAQXKGGXTRXDYKN 722
           +P N  I  ++   + + + P T        F   S PLT+I KI  Q K   T+ +YK 
Sbjct: 38  HPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKY 97

Query: 723 TRXFPLXAPSXALLFRP 773
           T  FPL +PS +LLF P
Sbjct: 98  TTPFPLQSPSYSLLFPP 114


>UniRef50_UPI00015C640B Cluster: hypothetical protein
           CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
           BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
           Citrobacter koseri ATCC BAA-895
          Length = 99

 Score = 49.6 bits (113), Expect = 1e-04
 Identities = 23/39 (58%), Positives = 25/39 (64%)
 Frame = -3

Query: 915 RXXXGVFXPXPXWSXRPTPX*DTYSVXYEKAPRFPKGER 799
           R   GV    P WS RP P  DT SV YEKAPRFPKG++
Sbjct: 23  RAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKK 61


>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides capillosus ATCC 29799|Rep: Putative
           uncharacterized protein - Bacteroides capillosus ATCC
           29799
          Length = 37

 Score = 45.6 bits (103), Expect = 0.002
 Identities = 21/25 (84%), Positives = 21/25 (84%)
 Frame = +3

Query: 780 LPEYLSAFLPSGSVXLSHXSRCRYL 854
           L  YLSAFLPSGSV LSH SRCRYL
Sbjct: 10  LTGYLSAFLPSGSVALSHSSRCRYL 34


>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
           root|Rep: Putative uncharacterized protein - Escherichia
           coli
          Length = 61

 Score = 41.1 bits (92), Expect = 0.052
 Identities = 20/38 (52%), Positives = 20/38 (52%)
 Frame = -1

Query: 602 PFXGLLXXXFFLXYPLIXWITXXPPLSXLIPLXXXERP 489
           P    L    F  YPLI WIT  PPLS L PL   ERP
Sbjct: 19  PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,775,745
Number of Sequences: 1657284
Number of extensions: 6750139
Number of successful extensions: 10417
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10316
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 113846332040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)