Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_P11
(1203 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 225 1e-57
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 126 9e-28
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 93 1e-17
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 83 2e-14
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 75 3e-12
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 72 3e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 69 2e-10
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 67 1e-09
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 58 3e-07
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 54 6e-06
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 50 2e-04
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 41 0.056
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 39 0.30
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 38 0.52
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 35 3.7
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 225 bits (551), Expect = 1e-57
Identities = 105/126 (83%), Positives = 106/126 (84%)
Frame = +3
Query: 549 SKRPGTXKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 728
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 729 CRLPDTCPPFSLREAWRFXIAHAVGIXXRCRSFAPSWAVCTNPPFXPTXXPYPVTIVXXP 908
CRLPDTCPPFSLREAWRF IAHAVGI RCRSFAPSWAVCTNPPF PT PYPVTIV P
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSP 121
Query: 909 XX*XTT 926
TT
Sbjct: 122 TRKDTT 127
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 126 bits (305), Expect = 9e-28
Identities = 73/120 (60%), Positives = 78/120 (65%)
Frame = +3
Query: 381 RGEAVCVLGALPLPRSLTRXARSFGCGERYQLTQRX*YGYPQNQGITQEXTCEQKASKRP 560
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 561 GTXKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 740
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P LP
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 93.5 bits (222), Expect = 1e-17
Identities = 44/51 (86%), Positives = 45/51 (88%)
Frame = +3
Query: 576 PRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 728
PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 47 PRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 82.6 bits (195), Expect = 2e-14
Identities = 40/75 (53%), Positives = 47/75 (62%)
Frame = -2
Query: 914 PGWXXDDSYRIRXXGRXERGVXAHSPAWXERPTPXXDTYSVSYXKAPRFPKGERRTGIR* 735
PGW DDSYR R ERGV A+SPAW ERP P DT SVSY KAPRFPKG++ +
Sbjct: 8 PGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQV-- 65
Query: 734 XAGSEQESARGSFQG 690
+G Q R + +G
Sbjct: 66 -SGKRQGRNRRAHEG 79
Score = 46.4 bits (105), Expect = 0.001
Identities = 24/40 (60%), Positives = 26/40 (65%)
Frame = -3
Query: 760 EKGGQVSGXRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 641
+K QVSG RQGRNRRAHEGA+ K SL PPLT
Sbjct: 60 KKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 75.4 bits (177), Expect = 3e-12
Identities = 41/89 (46%), Positives = 44/89 (49%)
Frame = +3
Query: 642 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFXIAHAVGIXXRCR 821
VR GETRQD K P P PPFSL + + GI RCR
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 822 SFAPSWAVCTNPPFXPTXXPYPVTIVXXP 908
SFAPSWAV NPPF PT PYPVT+ P
Sbjct: 83 SFAPSWAVSKNPPFSPTAAPYPVTVHLSP 111
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 71.7 bits (168), Expect = 3e-11
Identities = 33/37 (89%), Positives = 34/37 (91%)
Frame = +2
Query: 707 VRSPVPTLPXTGYLSAFLPSGSVALXHSSRCRYLXSV 817
+RSPVPTLP TGYLSAFLPSGSVAL HSSRCRYL SV
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 68.9 bits (161), Expect = 2e-10
Identities = 33/43 (76%), Positives = 33/43 (76%)
Frame = -2
Query: 557 PFAGLLLTCXFLRYPLILWITVLPPLSELIPLAAAERPSXASQ 429
P LLTC F YPLILWITVLPPLSEL PLAA ERPS ASQ
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERPSVASQ 61
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 66.9 bits (156), Expect = 1e-09
Identities = 28/35 (80%), Positives = 28/35 (80%)
Frame = -2
Query: 917 LPGWXXDDSYRIRXXGRXERGVXAHSPAWXERPTP 813
LPGW DDSYRIR GR ERGV AHSPAW ERPTP
Sbjct: 7 LPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTP 41
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 58.4 bits (135), Expect = 3e-07
Identities = 25/38 (65%), Positives = 27/38 (71%)
Frame = -2
Query: 914 PGWXXDDSYRIRXXGRXERGVXAHSPAWXERPTPXXDT 801
PGW +SYRIR R ERGV A+SPAW ERPTP DT
Sbjct: 8 PGWTQVNSYRIRRSSRAERGVLAYSPAWSERPTPSRDT 45
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 54.4 bits (125), Expect = 6e-06
Identities = 34/106 (32%), Positives = 51/106 (48%)
Frame = +3
Query: 411 LPLPRSLTRXARSFGCGERYQLTQRX*YGYPQNQGITQEXTCEQKASKRPGTXKRPRCWR 590
L L R L R ++ L + +P+N I + + + + P T
Sbjct: 9 LSLRRPLPNKTRYCCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSL 68
Query: 591 FSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 728
F S PLT+ITKI Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 69 FPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 49.6 bits (113), Expect = 2e-04
Identities = 29/57 (50%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 357 CXNESANARGEAVCVLGALPLPRSLTRXARSFGCGERYQL-TQRX*YGYPQNQGITQ 524
C + A AR EAV VL ALPL RS TR RS GCG + YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 41.1 bits (92), Expect = 0.056
Identities = 19/29 (65%), Positives = 20/29 (68%)
Frame = +2
Query: 845 VHXPPVXPDRXALSGNYRLXSXXVXXXLS 931
+H PPV PDR ALSGNYRL S V LS
Sbjct: 1 MHEPPVQPDRCALSGNYRLESNPVRHDLS 29
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 38.7 bits (86), Expect = 0.30
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +1
Query: 355 SAXMNRPTRGERRFAYW 405
+A MNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 37.9 bits (84), Expect = 0.52
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = -3
Query: 427 ERGSGRAPNTQTASPRALADSXMQ 356
+R + APNTQTASPRALADS MQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 35.1 bits (77), Expect = 3.7
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2
Query: 482 KXVIRLSTESGDNAGXNM 535
K VIRLSTESGDNAG NM
Sbjct: 42 KAVIRLSTESGDNAGKNM 59
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 793,924,477
Number of Sequences: 1657284
Number of extensions: 13908849
Number of successful extensions: 32917
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 31498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32903
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 121165024814
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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