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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_P10
         (1125 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC128989-1|AAI28990.1|  821|Homo sapiens LRRC7 protein protein.        31   7.7  
AL391728-2|CAH73692.1| 1495|Homo sapiens leucine rich repeat con...    31   7.7  
AL391728-1|CAH73691.1| 1537|Homo sapiens leucine rich repeat con...    31   7.7  
AL359412-2|CAH74019.1| 1495|Homo sapiens leucine rich repeat con...    31   7.7  
AL359412-1|CAH74018.1| 1537|Homo sapiens leucine rich repeat con...    31   7.7  
AL158840-2|CAH70975.1| 1495|Homo sapiens leucine rich repeat con...    31   7.7  
AL158840-1|CAH70974.1| 1537|Homo sapiens leucine rich repeat con...    31   7.7  
AL157948-2|CAI22426.1| 1495|Homo sapiens leucine rich repeat con...    31   7.7  
AL157948-1|CAI22425.1| 1537|Homo sapiens leucine rich repeat con...    31   7.7  
AL117353-1|CAI23423.1| 1495|Homo sapiens leucine rich repeat con...    31   7.7  
AF434715-1|AAL28133.1| 1537|Homo sapiens densin-180 protein.           31   7.7  
AB037786-1|BAA92603.1|  831|Homo sapiens KIAA1365 protein protein.     31   7.7  

>BC128989-1|AAI28990.1|  821|Homo sapiens LRRC7 protein protein.
          Length = 821

 Score = 31.1 bits (67), Expect = 7.7
 Identities = 17/44 (38%), Positives = 18/44 (40%)
 Frame = -3

Query: 133 PWSLWTRMPRPMTDETEKDMKQATTREXQQLGXERKAPVGARVE 2
           PW  WTR P P  D T    K  TT     L  ERK  +    E
Sbjct: 125 PWQNWTRTPSPFEDRTAFPSKLETTPTTSPL-PERKEHIKESTE 167


>AL391728-2|CAH73692.1| 1495|Homo sapiens leucine rich repeat
           containing 7 protein.
          Length = 1495

 Score = 31.1 bits (67), Expect = 7.7
 Identities = 17/44 (38%), Positives = 18/44 (40%)
 Frame = -3

Query: 133 PWSLWTRMPRPMTDETEKDMKQATTREXQQLGXERKAPVGARVE 2
           PW  WTR P P  D T    K  TT     L  ERK  +    E
Sbjct: 846 PWQNWTRTPSPFEDRTAFPSKLETTPTTSPL-PERKEHIKESTE 888


>AL391728-1|CAH73691.1| 1537|Homo sapiens leucine rich repeat
           containing 7 protein.
          Length = 1537

 Score = 31.1 bits (67), Expect = 7.7
 Identities = 17/44 (38%), Positives = 18/44 (40%)
 Frame = -3

Query: 133 PWSLWTRMPRPMTDETEKDMKQATTREXQQLGXERKAPVGARVE 2
           PW  WTR P P  D T    K  TT     L  ERK  +    E
Sbjct: 841 PWQNWTRTPSPFEDRTAFPSKLETTPTTSPL-PERKEHIKESTE 883


>AL359412-2|CAH74019.1| 1495|Homo sapiens leucine rich repeat
           containing 7 protein.
          Length = 1495

 Score = 31.1 bits (67), Expect = 7.7
 Identities = 17/44 (38%), Positives = 18/44 (40%)
 Frame = -3

Query: 133 PWSLWTRMPRPMTDETEKDMKQATTREXQQLGXERKAPVGARVE 2
           PW  WTR P P  D T    K  TT     L  ERK  +    E
Sbjct: 846 PWQNWTRTPSPFEDRTAFPSKLETTPTTSPL-PERKEHIKESTE 888


>AL359412-1|CAH74018.1| 1537|Homo sapiens leucine rich repeat
           containing 7 protein.
          Length = 1537

 Score = 31.1 bits (67), Expect = 7.7
 Identities = 17/44 (38%), Positives = 18/44 (40%)
 Frame = -3

Query: 133 PWSLWTRMPRPMTDETEKDMKQATTREXQQLGXERKAPVGARVE 2
           PW  WTR P P  D T    K  TT     L  ERK  +    E
Sbjct: 841 PWQNWTRTPSPFEDRTAFPSKLETTPTTSPL-PERKEHIKESTE 883


>AL158840-2|CAH70975.1| 1495|Homo sapiens leucine rich repeat
           containing 7 protein.
          Length = 1495

 Score = 31.1 bits (67), Expect = 7.7
 Identities = 17/44 (38%), Positives = 18/44 (40%)
 Frame = -3

Query: 133 PWSLWTRMPRPMTDETEKDMKQATTREXQQLGXERKAPVGARVE 2
           PW  WTR P P  D T    K  TT     L  ERK  +    E
Sbjct: 846 PWQNWTRTPSPFEDRTAFPSKLETTPTTSPL-PERKEHIKESTE 888


>AL158840-1|CAH70974.1| 1537|Homo sapiens leucine rich repeat
           containing 7 protein.
          Length = 1537

 Score = 31.1 bits (67), Expect = 7.7
 Identities = 17/44 (38%), Positives = 18/44 (40%)
 Frame = -3

Query: 133 PWSLWTRMPRPMTDETEKDMKQATTREXQQLGXERKAPVGARVE 2
           PW  WTR P P  D T    K  TT     L  ERK  +    E
Sbjct: 841 PWQNWTRTPSPFEDRTAFPSKLETTPTTSPL-PERKEHIKESTE 883


>AL157948-2|CAI22426.1| 1495|Homo sapiens leucine rich repeat
           containing 7 protein.
          Length = 1495

 Score = 31.1 bits (67), Expect = 7.7
 Identities = 17/44 (38%), Positives = 18/44 (40%)
 Frame = -3

Query: 133 PWSLWTRMPRPMTDETEKDMKQATTREXQQLGXERKAPVGARVE 2
           PW  WTR P P  D T    K  TT     L  ERK  +    E
Sbjct: 846 PWQNWTRTPSPFEDRTAFPSKLETTPTTSPL-PERKEHIKESTE 888


>AL157948-1|CAI22425.1| 1537|Homo sapiens leucine rich repeat
           containing 7 protein.
          Length = 1537

 Score = 31.1 bits (67), Expect = 7.7
 Identities = 17/44 (38%), Positives = 18/44 (40%)
 Frame = -3

Query: 133 PWSLWTRMPRPMTDETEKDMKQATTREXQQLGXERKAPVGARVE 2
           PW  WTR P P  D T    K  TT     L  ERK  +    E
Sbjct: 841 PWQNWTRTPSPFEDRTAFPSKLETTPTTSPL-PERKEHIKESTE 883


>AL117353-1|CAI23423.1| 1495|Homo sapiens leucine rich repeat
           containing 7 protein.
          Length = 1495

 Score = 31.1 bits (67), Expect = 7.7
 Identities = 17/44 (38%), Positives = 18/44 (40%)
 Frame = -3

Query: 133 PWSLWTRMPRPMTDETEKDMKQATTREXQQLGXERKAPVGARVE 2
           PW  WTR P P  D T    K  TT     L  ERK  +    E
Sbjct: 846 PWQNWTRTPSPFEDRTAFPSKLETTPTTSPL-PERKEHIKESTE 888


>AF434715-1|AAL28133.1| 1537|Homo sapiens densin-180 protein.
          Length = 1537

 Score = 31.1 bits (67), Expect = 7.7
 Identities = 17/44 (38%), Positives = 18/44 (40%)
 Frame = -3

Query: 133 PWSLWTRMPRPMTDETEKDMKQATTREXQQLGXERKAPVGARVE 2
           PW  WTR P P  D T    K  TT     L  ERK  +    E
Sbjct: 841 PWQNWTRTPSPFEDRTAFPSKLETTPTTSPL-PERKEHIKESTE 883


>AB037786-1|BAA92603.1|  831|Homo sapiens KIAA1365 protein protein.
          Length = 831

 Score = 31.1 bits (67), Expect = 7.7
 Identities = 17/44 (38%), Positives = 18/44 (40%)
 Frame = -3

Query: 133 PWSLWTRMPRPMTDETEKDMKQATTREXQQLGXERKAPVGARVE 2
           PW  WTR P P  D T    K  TT     L  ERK  +    E
Sbjct: 182 PWQNWTRTPSPFEDRTAFPSKLETTPTTSPL-PERKEHIKESTE 224


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,143,161
Number of Sequences: 237096
Number of extensions: 2502044
Number of successful extensions: 4312
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4310
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 15645181258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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