Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_P09
(1184 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 40 0.003
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 37 0.032
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.098
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.098
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.17
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.17
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.17
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.39
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.52
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.91
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.91
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.91
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 32 0.91
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 31 1.2
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 31 1.2
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 31 1.2
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 27 1.5
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 27 1.5
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 2.8
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 2.8
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 30 2.8
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 4.9
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 4.9
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 4.9
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 29 4.9
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 29 6.4
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 6.4
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 6.4
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 6.4
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 29 8.5
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 8.5
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 8.5
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 39.9 bits (89), Expect = 0.003
Identities = 25/77 (32%), Positives = 27/77 (35%), Gaps = 1/77 (1%)
Frame = -3
Query: 1113 PXXXPPLFXXFFXPPPXXPXFXXXFFPPXXXPXXKXFFXPXGXPXXXFXPFXXPPXFFXX 934
P PP+F PPP P + PP P P G P F P PP F
Sbjct: 695 PPGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPP-----PPQGIPPMGFDPNKPPPPMFQQ 749
Query: 933 G-GFXXPPPXXXGGXXP 886
G PPP G P
Sbjct: 750 GFNAGAPPPPFGRGAGP 766
Score = 32.3 bits (70), Expect = 0.69
Identities = 23/76 (30%), Positives = 23/76 (30%)
Frame = -2
Query: 1099 PPXXXFFXPPPXXPPXXKXFFSPXXXXPXXXFFFXXGGPXXXFXPXXXPPXFFFXGGVXK 920
PP PPP P P P G P F P PP F G
Sbjct: 699 PPMFNLNAPPPPGIPGYPPAPPPPGVGPPPP----QGIPPMGFDPNKPPPPMFQQGFNAG 754
Query: 919 XPPPXXGGGPPPXXXF 872
PPP G G P F
Sbjct: 755 APPPPFGRGAGPMSSF 770
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 36.7 bits (81), Expect = 0.032
Identities = 25/75 (33%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Frame = -2
Query: 1102 PPPXXXFFXPPPXXPPXXKXFFSPXXXXPXXXFF--FXXGGPXXXFXPXXXPPXFFFXGG 929
PPP F PPP PP P P GP F P PP F G
Sbjct: 48 PPPAPIFVAPPP--PPCFGPACPPPCFGPACVPLAPIIVNGPPPCFGPACPPPCF---GP 102
Query: 928 VXKXPPPXXGGGPPP 884
P P GPPP
Sbjct: 103 ACAPPAPIIVNGPPP 117
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 35.1 bits (77), Expect = 0.098
Identities = 20/72 (27%), Positives = 23/72 (31%)
Frame = -2
Query: 1102 PPPXXXFFXPPPXXPPXXKXFFSPXXXXPXXXFFFXXGGPXXXFXPXXXPPXFFFXGGVX 923
PPP + PPP PP P G P P PP + GG+
Sbjct: 289 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMP 348
Query: 922 KXPPPXXGGGPP 887
PPP P
Sbjct: 349 PPPPPRYPSAGP 360
Score = 32.3 bits (70), Expect = 0.69
Identities = 21/62 (33%), Positives = 22/62 (35%)
Frame = -3
Query: 630 PPPPLFXXFFXPLXPXFFXXXFPPFWGXXXPPPPPXRGXXXFFGGGXXXPPXXXPXXPXG 451
PPPP + P P PP PPPPP R GG PP P G
Sbjct: 288 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGM-GGMPPPPPPGMRYPGG 346
Query: 450 GP 445
P
Sbjct: 347 MP 348
Score = 29.5 bits (63), Expect = 4.9
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = +1
Query: 451 PPGXXGXXXG--GXXPPPPKKXXXPPXGGGGGGXXPPKXG 564
PPG G G PPPP PP G GG PP G
Sbjct: 303 PPGRTPGPPGMPGMPPPPPPSRFGPP--GMGGMPPPPPPG 340
Score = 28.7 bits (61), Expect = 8.5
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +1
Query: 451 PPGXXGXXXGGXXPPPPKKXXXPPXGGGGGGXXPP 555
PP G PPPP + PP G G PP
Sbjct: 352 PPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 386
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 35.1 bits (77), Expect = 0.098
Identities = 20/72 (27%), Positives = 23/72 (31%)
Frame = -2
Query: 1102 PPPXXXFFXPPPXXPPXXKXFFSPXXXXPXXXFFFXXGGPXXXFXPXXXPPXFFFXGGVX 923
PPP + PPP PP P G P P PP + GG+
Sbjct: 299 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMP 358
Query: 922 KXPPPXXGGGPP 887
PPP P
Sbjct: 359 PPPPPRYPSAGP 370
Score = 32.3 bits (70), Expect = 0.69
Identities = 21/62 (33%), Positives = 22/62 (35%)
Frame = -3
Query: 630 PPPPLFXXFFXPLXPXFFXXXFPPFWGXXXPPPPPXRGXXXFFGGGXXXPPXXXPXXPXG 451
PPPP + P P PP PPPPP R GG PP P G
Sbjct: 298 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGM-GGMPPPPPPGMRYPGG 356
Query: 450 GP 445
P
Sbjct: 357 MP 358
Score = 29.5 bits (63), Expect = 4.9
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = +1
Query: 451 PPGXXGXXXG--GXXPPPPKKXXXPPXGGGGGGXXPPKXG 564
PPG G G PPPP PP G GG PP G
Sbjct: 313 PPGRTPGPPGMPGMPPPPPPSRFGPP--GMGGMPPPPPPG 350
Score = 28.7 bits (61), Expect = 8.5
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +1
Query: 451 PPGXXGXXXGGXXPPPPKKXXXPPXGGGGGGXXPP 555
PP G PPPP + PP G G PP
Sbjct: 362 PPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 396
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.17
Identities = 24/72 (33%), Positives = 24/72 (33%)
Frame = -2
Query: 1099 PPXXXFFXPPPXXPPXXKXFFSPXXXXPXXXFFFXXGGPXXXFXPXXXPPXFFFXGGVXK 920
PP PPP PP P P GGP P PP GG
Sbjct: 707 PPITGGPPPPPGLPPITG---GPPPPPPPGGLPPITGGPPPPPPPGGLPP---ISGGPPP 760
Query: 919 XPPPXXGGGPPP 884
PPP G PPP
Sbjct: 761 PPPPPGGCPPPP 772
Score = 32.7 bits (71), Expect = 0.52
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +1
Query: 451 PPGXXGXXXGGXXPPPPKKXXXPPXGGGGGGXXPPKXG 564
PPG GG PPPP PP GG PP G
Sbjct: 731 PPGGLPPITGGPPPPPPP-GGLPPISGGPPPPPPPPGG 767
Score = 31.9 bits (69), Expect = 0.91
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = -3
Query: 630 PPPPLFXXFFXPLXPXFFXXXFPPFWGXXXPPPPPXRGXXXFFGGGXXXPPXXXPXXPXG 451
PPPP P PP G PPPPP G GG PP P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP-GGLPPISGGPPPPPPPPGGCPPPP 772
Query: 450 GP 445
P
Sbjct: 773 PP 774
Score = 31.9 bits (69), Expect = 0.91
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 6/41 (14%)
Frame = +1
Query: 451 PPGXXGXXXGGXXPPPPKK------XXXPPXGGGGGGXXPP 555
PPG GG PPPP PP GG GG PP
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.17
Identities = 24/72 (33%), Positives = 24/72 (33%)
Frame = -2
Query: 1099 PPXXXFFXPPPXXPPXXKXFFSPXXXXPXXXFFFXXGGPXXXFXPXXXPPXFFFXGGVXK 920
PP PPP PP P P GGP P PP GG
Sbjct: 707 PPITGGPPPPPGLPPITG---GPPPPPPPGGLPPITGGPPPPPPPGGLPP---ISGGPPP 760
Query: 919 XPPPXXGGGPPP 884
PPP G PPP
Sbjct: 761 PPPPPGGCPPPP 772
Score = 32.7 bits (71), Expect = 0.52
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +1
Query: 451 PPGXXGXXXGGXXPPPPKKXXXPPXGGGGGGXXPPKXG 564
PPG GG PPPP PP GG PP G
Sbjct: 731 PPGGLPPITGGPPPPPPP-GGLPPISGGPPPPPPPPGG 767
Score = 31.9 bits (69), Expect = 0.91
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = -3
Query: 630 PPPPLFXXFFXPLXPXFFXXXFPPFWGXXXPPPPPXRGXXXFFGGGXXXPPXXXPXXPXG 451
PPPP P PP G PPPPP G GG PP P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP-GGLPPISGGPPPPPPPPGGCPPPP 772
Query: 450 GP 445
P
Sbjct: 773 PP 774
Score = 31.9 bits (69), Expect = 0.91
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 6/41 (14%)
Frame = +1
Query: 451 PPGXXGXXXGGXXPPPPKK------XXXPPXGGGGGGXXPP 555
PPG GG PPPP PP GG GG PP
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.17
Identities = 24/72 (33%), Positives = 24/72 (33%)
Frame = -2
Query: 1099 PPXXXFFXPPPXXPPXXKXFFSPXXXXPXXXFFFXXGGPXXXFXPXXXPPXFFFXGGVXK 920
PP PPP PP P P GGP P PP GG
Sbjct: 290 PPITGGPPPPPGLPPITG---GPPPPPPPGGLPPITGGPPPPPPPGGLPP---ISGGPPP 343
Query: 919 XPPPXXGGGPPP 884
PPP G PPP
Sbjct: 344 PPPPPGGCPPPP 355
Score = 32.7 bits (71), Expect = 0.52
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +1
Query: 451 PPGXXGXXXGGXXPPPPKKXXXPPXGGGGGGXXPPKXG 564
PPG GG PPPP PP GG PP G
Sbjct: 314 PPGGLPPITGGPPPPPPP-GGLPPISGGPPPPPPPPGG 350
Score = 31.9 bits (69), Expect = 0.91
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = -3
Query: 630 PPPPLFXXFFXPLXPXFFXXXFPPFWGXXXPPPPPXRGXXXFFGGGXXXPPXXXPXXPXG 451
PPPP P PP G PPPPP G GG PP P
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP-GGLPPISGGPPPPPPPPGGCPPPP 355
Query: 450 GP 445
P
Sbjct: 356 PP 357
Score = 31.9 bits (69), Expect = 0.91
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 6/41 (14%)
Frame = +1
Query: 451 PPGXXGXXXGGXXPPPPKK------XXXPPXGGGGGGXXPP 555
PPG GG PPPP PP GG GG PP
Sbjct: 330 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 33.1 bits (72), Expect = 0.39
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -2
Query: 955 PPXFFFXGGVXKXPPPXXGGGPPPXXXFXXXXLKXPP 845
PP F GG+ PPP GG PPP F PP
Sbjct: 85 PPPPMFAGGIPP-PPPMMGGIPPPPPMFGAPPPPPPP 120
Score = 32.7 bits (71), Expect = 0.52
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -3
Query: 630 PPPPLFXXFFXPLXPXFFXXXFPPFWGXXXPPPPPXRG 517
PPPP+F P P PP PPPPP G
Sbjct: 85 PPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSG 122
Score = 31.9 bits (69), Expect = 0.91
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = -1
Query: 326 PPXFXXXXLFXSPFFXXFXPPXXLFFXXXXPPPPXXGGXXPPXXFF 189
PP + P PP +F PPPP GG PP F
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMF 111
Score = 30.3 bits (65), Expect = 2.8
Identities = 20/63 (31%), Positives = 22/63 (34%)
Frame = -1
Query: 1034 PPXXXPXXKXFFXPGGXPXXFFXXLXPPXFFFXXGGFXXPPPXXXGGXXPXXXLXXGXFK 855
PP FF P P F + PP GG PPP GG P + G
Sbjct: 53 PPGQSIPKPSFFIPPPVPNGF---IPPPP---GPGGIPPPPPMFAGGIPPPPPMMGGIPP 106
Query: 854 XPP 846
PP
Sbjct: 107 PPP 109
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = -1
Query: 332 PXPPXFXXXXLFXSPFFXXFXPPXXLFFXXXXPPPPXXGGXXP 204
P PP F P PP +F PPPP G P
Sbjct: 85 PPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAP 127
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 32.7 bits (71), Expect = 0.52
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +1
Query: 457 GXXGXXXGGXXPPPPKKXXXPPXGGGGGG 543
G G GG PPPP GGGGGG
Sbjct: 43 GGGGGCGGGCAPPPPPPACGGGCGGGGGG 71
Score = 32.7 bits (71), Expect = 0.52
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +1
Query: 457 GXXGXXXGGXXPPPPKKXXXPPXGGGGGG 543
G G GG PPPP GGGGGG
Sbjct: 100 GGGGGCGGGCAPPPPPPACGGGCGGGGGG 128
Score = 30.3 bits (65), Expect = 2.8
Identities = 21/62 (33%), Positives = 21/62 (33%)
Frame = +2
Query: 446 GPPXGXXGXXXGGXXXPPPKKXXXPRXGGGGGXKXPQXGGKXXXKKXGXRGXKNXXKRGG 625
G G G GG PPP GGGGG GG G G GG
Sbjct: 39 GGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCG--GGGGGCGGGGGCGGGGGGCGGGG 96
Query: 626 GG 631
GG
Sbjct: 97 GG 98
Score = 29.5 bits (63), Expect = 4.9
Identities = 21/62 (33%), Positives = 21/62 (33%)
Frame = +2
Query: 446 GPPXGXXGXXXGGXXXPPPKKXXXPRXGGGGGXKXPQXGGKXXXKKXGXRGXKNXXKRGG 625
G G G GG PPP GGGGG GG G G GG
Sbjct: 96 GGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGG----CGGGCGGGGGGGCGGGGGGGCGG 151
Query: 626 GG 631
GG
Sbjct: 152 GG 153
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.91
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 481 GXXPPPPKKXXXPPXGGGGGGXXPPKXGKXXXKKXG 588
G PPPP PP G G PP G + G
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTG 270
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = -3
Query: 564 PPFWGXXXPPPPPXRGXXXFFGGGXXXPP--XXXPXXPXGG 448
PP G PPPPP G G PP P P GG
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 287
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.91
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 481 GXXPPPPKKXXXPPXGGGGGGXXPPKXGKXXXKKXG 588
G PPPP PP G G PP G + G
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTG 291
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = -3
Query: 564 PPFWGXXXPPPPPXRGXXXFFGGGXXXPP--XXXPXXPXGG 448
PP G PPPPP G G PP P P GG
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 308
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.91
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 481 GXXPPPPKKXXXPPXGGGGGGXXPPKXGKXXXKKXG 588
G PPPP PP G G PP G + G
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTG 276
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = -3
Query: 564 PPFWGXXXPPPPPXRGXXXFFGGGXXXPP--XXXPXXPXGG 448
PP G PPPPP G G PP P P GG
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 293
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 31.9 bits (69), Expect = 0.91
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +1
Query: 457 GXXGXXXGGXXPPPPKKXXXPPXGGGGGGXXPP 555
G G G PPPP PP GGG PP
Sbjct: 23 GGGGGGCGCGAPPPPPACAPPPAPACGGGAPPP 55
Score = 28.7 bits (61), Expect = 8.5
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 457 GXXGXXXGGXXPPPPKKXXXPPXGGGGGGXXPP 555
G G G PPPP P GGG PP
Sbjct: 24 GGGGGCGCGAPPPPPACAPPPAPACGGGAPPPP 56
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +1
Query: 478 GGXXPPPPKKXXXPPXG-GGGGGXXPP 555
GG PPP PP GGGGG PP
Sbjct: 785 GGPGAPPPPGMRPPPGAPGGGGGMYPP 811
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = -3
Query: 597 PLXPXFFXXXFPPFWGXXXPPPPPXRGXXXFFGGGXXXPPXXXPXXP-XGGP 445
P P PP G PPPP R GGG P P P GGP
Sbjct: 771 PAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGP 822
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +1
Query: 478 GGXXPPPPKKXXXPPXG-GGGGGXXPP 555
GG PPP PP GGGGG PP
Sbjct: 785 GGPGAPPPPGMRPPPGAPGGGGGMYPP 811
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = -3
Query: 597 PLXPXFFXXXFPPFWGXXXPPPPPXRGXXXFFGGGXXXPPXXXPXXP-XGGP 445
P P PP G PPPP R GGG P P P GGP
Sbjct: 771 PAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGP 822
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +1
Query: 478 GGXXPPPPKKXXXPPXG-GGGGGXXPP 555
GG PPP PP GGGGG PP
Sbjct: 785 GGPGAPPPPGMRPPPGAPGGGGGMYPP 811
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +1
Query: 478 GGXXPPPPKKXXXPPXG-GGGGGXXPP 555
GG PPP PP GGGGG PP
Sbjct: 785 GGPGAPPPPGMRPPPGAPGGGGGMYPP 811
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 26.6 bits (56), Expect(2) = 1.5
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 457 GXXGXXXGGXXPPPPKKXXXPPXGGGGG 540
G G GG PPP GGGGG
Sbjct: 62 GGGGCGGGGGCAPPPAPCGGGCGGGGGG 89
Score = 23.0 bits (47), Expect(2) = 1.5
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 526 GGGGGGXXPPKXGKXXXKKXGXKGXKKXXKKGGGG 630
GGGGGG G G G GGGG
Sbjct: 125 GGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGG 159
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 26.6 bits (56), Expect(2) = 1.5
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 457 GXXGXXXGGXXPPPPKKXXXPPXGGGGG 540
G G GG PPP GGGGG
Sbjct: 62 GGGGCGGGGGCAPPPAPCGGGCGGGGGG 89
Score = 23.0 bits (47), Expect(2) = 1.5
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 526 GGGGGGXXPPKXGKXXXKKXGXKGXKKXXKKGGGG 630
GGGGGG G G G GGGG
Sbjct: 125 GGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGG 159
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.3 bits (65), Expect = 2.8
Identities = 21/62 (33%), Positives = 21/62 (33%)
Frame = -3
Query: 630 PPPPLFXXFFXPLXPXFFXXXFPPFWGXXXPPPPPXRGXXXFFGGGXXXPPXXXPXXPXG 451
PPPP P P F P PPPPP G G PP P G
Sbjct: 609 PPPP------PPPPPQSFGMA-PISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAG 661
Query: 450 GP 445
GP
Sbjct: 662 GP 663
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.3 bits (65), Expect = 2.8
Identities = 21/62 (33%), Positives = 21/62 (33%)
Frame = -3
Query: 630 PPPPLFXXFFXPLXPXFFXXXFPPFWGXXXPPPPPXRGXXXFFGGGXXXPPXXXPXXPXG 451
PPPP P P F P PPPPP G G PP P G
Sbjct: 435 PPPP------PPPPPQSFGMA-PISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAG 487
Query: 450 GP 445
GP
Sbjct: 488 GP 489
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 597 PLXPXFFXXXFPPFWGXXXPPPP 529
P P FPPFW PPPP
Sbjct: 425 PFPPHHGHHHFPPFWPPCPPPPP 447
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.5 bits (63), Expect = 4.9
Identities = 18/60 (30%), Positives = 20/60 (33%)
Frame = +1
Query: 451 PPGXXGXXXGGXXPPPPKKXXXPPXGGGGGGXXPPKXGKXXXKKXGXKGXKKXXKKGGGG 630
P G GG P P P G GG G P G+ G G + G GG
Sbjct: 151 PTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGG 210
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.5 bits (63), Expect = 4.9
Identities = 18/60 (30%), Positives = 20/60 (33%)
Frame = +1
Query: 451 PPGXXGXXXGGXXPPPPKKXXXPPXGGGGGGXXPPKXGKXXXKKXGXKGXKKXXKKGGGG 630
P G GG P P P G GG G P G+ G G + G GG
Sbjct: 431 PTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGG 490
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.5 bits (63), Expect = 4.9
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 5/43 (11%)
Frame = +1
Query: 451 PPGXXGXXXGGXXPPPP-----KKXXXPPXGGGGGGXXPPKXG 564
P G G GG PPPP PP GG GG PP G
Sbjct: 400 PQGPGGP--GGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGG 440
Score = 29.1 bits (62), Expect = 6.4
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +1
Query: 451 PPGXXGXXXGGXXPPPPKKXXXPPXGGGGGGXXPPKXG 564
PP G G PPP P GG GG PP G
Sbjct: 380 PPPQSGPP--GAFAPPPSAFGAPQGPGGPGGYGPPPPG 415
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 29.5 bits (63), Expect = 4.9
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +1
Query: 466 GXXXGGXXPPPPKKXXXPPXGGGGGGXXPPKXG 564
G GG PPP PP GGG GG P G
Sbjct: 22 GGGGGGCCAPPPP----PPCGGGCGGGAPAAGG 50
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 442 KXXPPGXXGXXXGGXXPPPPKKXXXPPXGGGGGGXXPP 555
K PPG G P P K P GGG G P
Sbjct: 156 KPCPPGPAGEPGHDGAPGAPGKPGAPGVGGGSGAPGAP 193
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 451 PPGXXGXXXGGXXPPPPKKXXXPPXGGGGGGXXPP 555
PP G GG P P GGGGG PP
Sbjct: 35 PPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPP 69
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.1 bits (62), Expect = 6.4
Identities = 27/78 (34%), Positives = 27/78 (34%)
Frame = -2
Query: 1117 FXXFXPPPXXXFFXPPPXXPPXXKXFFSPXXXXPXXXFFFXXGGPXXXFXPXXXPPXFFF 938
F F PPP F PPP PP P P F GP F P P F
Sbjct: 293 FGFFPPPPRGHF--PPP--PPHFMGRGMPPPFMPPPPHF--GMGPPRGFMPPPHP--MMF 344
Query: 937 XGGVXKXPPPXXGGGPPP 884
GG P P PPP
Sbjct: 345 RGG----PYPPFFPPPPP 358
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.1 bits (62), Expect = 6.4
Identities = 27/78 (34%), Positives = 27/78 (34%)
Frame = -2
Query: 1117 FXXFXPPPXXXFFXPPPXXPPXXKXFFSPXXXXPXXXFFFXXGGPXXXFXPXXXPPXFFF 938
F F PPP F PPP PP P P F GP F P P F
Sbjct: 293 FGFFPPPPRGHF--PPP--PPHFMGRGMPPPFMPPPPHF--GMGPPRGFMPPPHP--MMF 344
Query: 937 XGGVXKXPPPXXGGGPPP 884
GG P P PPP
Sbjct: 345 RGG----PYPPFFPPPPP 358
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 28.7 bits (61), Expect = 8.5
Identities = 17/56 (30%), Positives = 20/56 (35%)
Frame = +2
Query: 458 GXXGXXXGGXXXPPPKKXXXPRXGGGGGXKXPQXGGKXXXKKXGXRGXKNXXKRGG 625
G G GG + GGGGG + GG + G RG RGG
Sbjct: 316 GGFGGDRGGYGGGGGRGGFDGGRGGGGGFRGGDRGGFRGGDRGGFRGGDRGGFRGG 371
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.7 bits (61), Expect = 8.5
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +1
Query: 457 GXXGXXXGGXXPPPPKKXXXPPXGGGGGGXXPPKXGKXXXKKXG 588
G G GG PP P GGGGG PP K K G
Sbjct: 616 GGPGGPGGGGGPP-----RGPGGGGGGGPTGPPAPPKPPAKPRG 654
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.7 bits (61), Expect = 8.5
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +1
Query: 457 GXXGXXXGGXXPPPPKKXXXPPXGGGGGGXXPPKXGKXXXKKXG 588
G G GG PP P GGGGG PP K K G
Sbjct: 616 GGPGGPGGGGGPP-----RGPGGGGGGGPTGPPAPPKPPAKPRG 654
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.310 0.150 0.475
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,760,898
Number of Sequences: 27780
Number of extensions: 335312
Number of successful extensions: 1480
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3245116438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
- SilkBase 1999-2023 -