Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_P07
         (1169 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical pr...   198   8e-51
Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical p...   151   7e-37
Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical pr...    31   1.6  
U42835-6|AAA83589.2|  816|Caenorhabditis elegans Dehydrogenases,...    30   3.6  
AF106576-4|AAC78176.1|  473|Caenorhabditis elegans Hypothetical ...    29   4.8  
Z32680-2|CAA83597.1| 1218|Caenorhabditis elegans Hypothetical pr...    29   8.4  

>L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical
           protein F54H12.6 protein.
          Length = 213

 Score =  198 bits (482), Expect = 8e-51
 Identities = 109/211 (51%), Positives = 134/211 (63%), Gaps = 4/211 (1%)
 Frame = +2

Query: 119 NQXLAEXSYVSGYTPSQADVQVFEQVGKAP-AANLPHVLRWYNQIASYTPAERKTWSQ-- 289
           N  LAE ++ +G+  S  D Q+F  +G AP A+  P+V RWY  +ASYT AERKTW+   
Sbjct: 15  NTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVASYTDAERKTWASAG 74

Query: 290 GTSPLXXXXXXXXXXXXXXXXXXXXVDLFGSGXXXXXXXXXXXXXXXLKAYADKKSKKPA 469
           G++P                      DLFGS                L AYA+KK+KK  
Sbjct: 75  GSAPAAAAADGDDF------------DLFGSDDEEEDAEKAKIVEERLAAYAEKKAKKAG 122

Query: 470 LIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGYGINKLQIMCVIED 649
            IAKSS++LDVKPWDDETD+ EME  VR+IEM+GL+WG +KL+P+GYGI KLQI+ VIED
Sbjct: 123 PIAKSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIED 182

Query: 650 DKVSVDLLTEKIQ-EFEDFVQSVDIAAFNKI 739
            KVSVD L EKI  +FED VQSVDI AFNKI
Sbjct: 183 LKVSVDDLIEKITGDFEDHVQSVDIVAFNKI 213


>Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical
           protein Y41E3.10a protein.
          Length = 263

 Score =  151 bits (367), Expect = 7e-37
 Identities = 78/125 (62%), Positives = 90/125 (72%), Gaps = 1/125 (0%)
 Frame = +2

Query: 368 DLFGSGXXXXXXXXXXXXXXXLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQ 547
           DLFGS                L AYA KK+ K   IAKSS++LDVKPWDDETD+ EME  
Sbjct: 139 DLFGSEDEEEDEEKKKVVEERLAAYAAKKATKAGPIAKSSVILDVKPWDDETDLGEMEKL 198

Query: 548 VRTIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDKVSVDLLTEKIQ-EFEDFVQSVDIA 724
           VR+IEM+GL+WG +KL+P+GYGI KLQI+ VIED KVSVD L EKI  +FED VQSVDI 
Sbjct: 199 VRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIEKITGDFEDHVQSVDIV 258

Query: 725 AFNKI 739
           AFNKI
Sbjct: 259 AFNKI 263


>Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical
           protein AC3.3 protein.
          Length = 425

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -1

Query: 269 QPECMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFXQ 132
           QP CM   + + VV+     PAP Q     + Q +++C+QT+   Q
Sbjct: 130 QPSCMPACEQSCVVQ----TPAPVQCVPQCQQQCQQQCVQTQPIQQ 171


>U42835-6|AAA83589.2|  816|Caenorhabditis elegans Dehydrogenases,
           short chain protein27 protein.
          Length = 816

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 22/66 (33%), Positives = 32/66 (48%)
 Frame = +2

Query: 485 SILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDKVSV 664
           SI+L VKP DDE  ++++ NQ     M G LW A++     Y   ++     I    V V
Sbjct: 436 SIMLCVKPADDEI-VQKIRNQ-----MSGALWSAAQFAVTSYVCVRVLKFLYIMCKSVLV 489

Query: 665 DLLTEK 682
             +T K
Sbjct: 490 HFITPK 495


>AF106576-4|AAC78176.1|  473|Caenorhabditis elegans Hypothetical
           protein W07E6.2 protein.
          Length = 473

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
 Frame = +2

Query: 560 EMEGLLWGASKLVPVGYGINKLQIMC----VIEDDKVSVDLLTEKIQEFEDFVQ 709
           E E  L G+  LVPV    N+LQI+C       DD V +   T +  E  D ++
Sbjct: 14  EDENELGGSGILVPVDISTNELQILCNQLLGSSDDPVPISFFTTEGAEIVDSIR 67


>Z32680-2|CAA83597.1| 1218|Caenorhabditis elegans Hypothetical
           protein C28A5.2 protein.
          Length = 1218

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = -2

Query: 652 VVFDDTHNLQFIYAIPNRHKFGGSPEKAFHFNSAYLVFHF 533
           VV+DD +       +P    F   P K+F    AY VFHF
Sbjct: 832 VVYDDMNVKNTSVVVPIGGNFNNLP-KSFQLGDAYKVFHF 870


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,157,384
Number of Sequences: 27780
Number of extensions: 351498
Number of successful extensions: 1747
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1697
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3192944148
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)