Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_P06
(1155 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110479-26|CAB54376.1| 385|Caenorhabditis elegans Hypothetical... 297 1e-80
AL110479-25|CAB60321.1| 388|Caenorhabditis elegans Hypothetical... 297 1e-80
Z82259-3|CAB05127.1| 368|Caenorhabditis elegans Hypothetical pr... 282 3e-76
Z80223-3|CAB02317.1| 369|Caenorhabditis elegans Hypothetical pr... 278 5e-75
Z29560-1|CAA82655.1| 367|Caenorhabditis elegans Hypothetical pr... 272 4e-73
AC006618-2|AAK68249.1| 340|Caenorhabditis elegans Glutamine syn... 259 2e-69
U41009-1|AAA82278.3| 501|Caenorhabditis elegans Hypothetical pr... 31 1.5
AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical ... 29 6.2
Z81537-2|CAB04373.1| 682|Caenorhabditis elegans Hypothetical pr... 29 8.2
Z81062-13|CAB82210.1| 333|Caenorhabditis elegans Hypothetical p... 29 8.2
>AL110479-26|CAB54376.1| 385|Caenorhabditis elegans Hypothetical
protein Y105C5B.28b protein.
Length = 385
Score = 297 bits (728), Expect = 1e-80
Identities = 129/230 (56%), Positives = 160/230 (69%), Gaps = 2/230 (0%)
Frame = +2
Query: 284 ATYVWIDGSGEHVRCKDRTLNYIPETPKDLPIWNYXXXXXXXXXXXXXXXHLKPQAIYRD 463
A Y+WIDGSGE++R K RT ++ P P+ LPIWN+ +LKP AIY D
Sbjct: 30 ALYIWIDGSGENIRAKTRTFDFEPTDPEKLPIWNFDGSSTGQAEGADSDVYLKPVAIYPD 89
Query: 464 PFRRGNHVLVMCDTYDYSMQPTKTNHRIKCQEAYDRCRDHEPWFGIEQEYVLLDSDLRPF 643
PFR+G + LVMC+TYD +PT TN+R +C+E ++ D PWFG+EQEY LLD D PF
Sbjct: 90 PFRQGKNKLVMCETYDNKKKPTATNYRQRCKEVMEKAADQHPWFGMEQEYTLLDIDGHPF 149
Query: 644 GWPTTGSPPAQGPYYCGVGANKVFARDLIEAHYKCCLYAGVPITGTNAEAMLSQWEFQVG 823
GWP G P QGPYYCGVGANKV+ RD++EAHY+ CLYAG+ I+GTNAE M QWEFQVG
Sbjct: 150 GWPKNGFPGPQGPYYCGVGANKVYGRDIVEAHYRACLYAGIQISGTNAEVMPGQWEFQVG 209
Query: 824 PSVGVSAGDDLWIARFILHRLAEEFGVIVTFDPKPGVGLEW--FGCSPQF 967
P G+ GD LW+AR++L R+AEEFGVI +FD KP G +W GC F
Sbjct: 210 PCEGIQMGDQLWVARYLLQRVAEEFGVIASFDCKPIKG-DWNGAGCHTNF 258
Score = 42.3 bits (95), Expect = 6e-04
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +3
Query: 936 DWNGSGAHHNFSTXKMRXEGGITE 1007
DWNG+G H NFST KMR GGI E
Sbjct: 248 DWNGAGCHTNFSTDKMRNPGGIDE 271
>AL110479-25|CAB60321.1| 388|Caenorhabditis elegans Hypothetical
protein Y105C5B.28a protein.
Length = 388
Score = 297 bits (728), Expect = 1e-80
Identities = 129/230 (56%), Positives = 160/230 (69%), Gaps = 2/230 (0%)
Frame = +2
Query: 284 ATYVWIDGSGEHVRCKDRTLNYIPETPKDLPIWNYXXXXXXXXXXXXXXXHLKPQAIYRD 463
A Y+WIDGSGE++R K RT ++ P P+ LPIWN+ +LKP AIY D
Sbjct: 33 ALYIWIDGSGENIRAKTRTFDFEPTDPEKLPIWNFDGSSTGQAEGADSDVYLKPVAIYPD 92
Query: 464 PFRRGNHVLVMCDTYDYSMQPTKTNHRIKCQEAYDRCRDHEPWFGIEQEYVLLDSDLRPF 643
PFR+G + LVMC+TYD +PT TN+R +C+E ++ D PWFG+EQEY LLD D PF
Sbjct: 93 PFRQGKNKLVMCETYDNKKKPTATNYRQRCKEVMEKAADQHPWFGMEQEYTLLDIDGHPF 152
Query: 644 GWPTTGSPPAQGPYYCGVGANKVFARDLIEAHYKCCLYAGVPITGTNAEAMLSQWEFQVG 823
GWP G P QGPYYCGVGANKV+ RD++EAHY+ CLYAG+ I+GTNAE M QWEFQVG
Sbjct: 153 GWPKNGFPGPQGPYYCGVGANKVYGRDIVEAHYRACLYAGIQISGTNAEVMPGQWEFQVG 212
Query: 824 PSVGVSAGDDLWIARFILHRLAEEFGVIVTFDPKPGVGLEW--FGCSPQF 967
P G+ GD LW+AR++L R+AEEFGVI +FD KP G +W GC F
Sbjct: 213 PCEGIQMGDQLWVARYLLQRVAEEFGVIASFDCKPIKG-DWNGAGCHTNF 261
Score = 42.3 bits (95), Expect = 6e-04
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +3
Query: 936 DWNGSGAHHNFSTXKMRXEGGITE 1007
DWNG+G H NFST KMR GGI E
Sbjct: 251 DWNGAGCHTNFSTDKMRNPGGIDE 274
>Z82259-3|CAB05127.1| 368|Caenorhabditis elegans Hypothetical
protein C28D4.3 protein.
Length = 368
Score = 282 bits (692), Expect = 3e-76
Identities = 122/251 (48%), Positives = 163/251 (64%), Gaps = 3/251 (1%)
Frame = +2
Query: 224 LSKTLLDRYRDLPLPEDKVLATYVWIDGSGEHVRCKDRTLNYIPETPKDLPIWNYXXXXX 403
L + +D + LP K ATYVWIDG+GEH+R K RT+N P+ + PIWNY
Sbjct: 12 LGQATIDHFMGLPAHPTKCQATYVWIDGTGEHLRAKTRTINTKPQYLSEYPIWNYDGSST 71
Query: 404 XXXXXXXXXXHLKPQAIYRDPFRRGNHVLVMCDTYDYSMQPTKTNHRIKCQEAYDRCRDH 583
+L+P A++ DPF G +VLVMCDT D+ M+PT TNHR C E + D
Sbjct: 72 GQADGLNSDRYLRPVAVFPDPFLGGLNVLVMCDTLDHEMKPTATNHRQMCAELMKKVSDQ 131
Query: 584 EPWFGIEQEYVLLDSDLRPFGWPTTGSPPAQGPYYCGVGANKVFARDLIEAHYKCCLYAG 763
+PWFG+EQEY+++D D P GWP G P QG YYCG+GA++ F R+++E HY+ CL+AG
Sbjct: 132 QPWFGMEQEYLIVDRDEHPLGWPKHGYPAPQGKYYCGIGADRAFGREVVETHYRACLHAG 191
Query: 764 VPITGTNAEAMLSQWEFQVGPSVGVSAGDDLWIARFILHRLAEEFGVIVTFDPKPGVGL- 940
+ I G+NAE QWEFQ+G +G+ GD LW+AR+ILHR+AE+FGV V+ DPKP V +
Sbjct: 192 ITIFGSNAEVTPGQWEFQIGTCLGIEMGDQLWMARYILHRVAEQFGVCVSLDPKPRVTMG 251
Query: 941 EW--FGCSPQF 967
+W GC F
Sbjct: 252 DWNGAGCHTNF 262
Score = 35.1 bits (77), Expect = 0.095
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 930 VSDWNGSGAHHNFSTXKMRXEGGI 1001
+ DWNG+G H NFST MR G+
Sbjct: 250 MGDWNGAGCHTNFSTIDMRRPDGL 273
>Z80223-3|CAB02317.1| 369|Caenorhabditis elegans Hypothetical
protein F26D10.10 protein.
Length = 369
Score = 278 bits (682), Expect = 5e-75
Identities = 121/251 (48%), Positives = 161/251 (64%), Gaps = 3/251 (1%)
Frame = +2
Query: 224 LSKTLLDRYRDLPLPEDKVLATYVWIDGSGEHVRCKDRTLNYIPETPKDLPIWNYXXXXX 403
L + +D + LP K ATYVWIDG+GE +R K RT N P+ + PIWNY
Sbjct: 12 LGQATIDHFMGLPAHPSKCQATYVWIDGTGEQLRAKTRTFNLKPQYLSEYPIWNYDGSST 71
Query: 404 XXXXXXXXXXHLKPQAIYRDPFRRGNHVLVMCDTYDYSMQPTKTNHRIKCQEAYDRCRDH 583
+L+P A++ DPF +G++VLVMC+T D +M+PT TNHR C + +H
Sbjct: 72 GQAEGLNSDRYLRPVAVFPDPFLQGHNVLVMCETLDETMKPTATNHRQNCAAIMKKVAEH 131
Query: 584 EPWFGIEQEYVLLDSDLRPFGWPTTGSPPAQGPYYCGVGANKVFARDLIEAHYKCCLYAG 763
PWFG+EQEY+++D D P GWP G P QG YYCGVGA++ F R+++E HY+ CL+AG
Sbjct: 132 HPWFGMEQEYLIVDRDEHPLGWPKHGYPAPQGKYYCGVGADRAFGREVVETHYRACLHAG 191
Query: 764 VPITGTNAEAMLSQWEFQVGPSVGVSAGDDLWIARFILHRLAEEFGVIVTFDPKPGVGL- 940
+ I GTNAE QWEFQ+G G+ GD LW+AR+ILHR+AE+FGV V+ DPKP V +
Sbjct: 192 INIFGTNAEVTPGQWEFQIGTCEGIDMGDQLWMARYILHRVAEQFGVCVSLDPKPKVTMG 251
Query: 941 EW--FGCSPQF 967
+W GC F
Sbjct: 252 DWNGAGCHTNF 262
Score = 36.3 bits (80), Expect = 0.041
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 930 VSDWNGSGAHHNFSTXKMRXEGGI 1001
+ DWNG+G H NFST +MR G+
Sbjct: 250 MGDWNGAGCHTNFSTIEMRRPNGL 273
>Z29560-1|CAA82655.1| 367|Caenorhabditis elegans Hypothetical
protein K03H1.1 protein.
Length = 367
Score = 272 bits (666), Expect = 4e-73
Identities = 121/251 (48%), Positives = 160/251 (63%), Gaps = 3/251 (1%)
Frame = +2
Query: 224 LSKTLLDRYRDLPLPEDKVLATYVWIDGSGEHVRCKDRTLNYIPETPKDLPIWNYXXXXX 403
L ++D++ L K+ ATYVWIDG+GE++R K RT + +P+ +D PIWNY
Sbjct: 12 LGTAVIDQFLGLRPHPTKIQATYVWIDGTGENLRSKTRTFDKLPKRIEDYPIWNYDGSST 71
Query: 404 XXXXXXXXXXHLKPQAIYRDPFRRGNHVLVMCDTYDYSMQPTKTNHRIKCQEAYDRCRDH 583
+L+P A Y DPF G + LVMCDT D+ MQPT T+HR C E RD
Sbjct: 72 GQAKGRDSDRYLRPVAAYPDPFLGGGNKLVMCDTLDHQMQPTATSHRQACAEIMHEIRDT 131
Query: 584 EPWFGIEQEYVLLDSDLRPFGWPTTGSPPAQGPYYCGVGANKVFARDLIEAHYKCCLYAG 763
PWFG+EQEY+++D D P GWP G P QG YYC VGA++ F R+++E HY+ CL+AG
Sbjct: 132 RPWFGMEQEYLIVDRDEHPLGWPKHGFPDPQGKYYCSVGADRAFGREVVETHYRACLHAG 191
Query: 764 VPITGTNAEAMLSQWEFQVGPSVGVSAGDDLWIARFILHRLAEEFGVIVTFDPKPGVGL- 940
+ I GTNAE QWEFQ+G G+ GD LW++R+ILHR+AE+FGV V+ DPKP V +
Sbjct: 192 LNIFGTNAEVTPGQWEFQIGTCEGIDMGDQLWMSRYILHRVAEQFGVCVSLDPKPKVTMG 251
Query: 941 EW--FGCSPQF 967
+W GC F
Sbjct: 252 DWNGAGCHTNF 262
Score = 39.5 bits (88), Expect = 0.004
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3
Query: 930 VSDWNGSGAHHNFSTXKMRXEGGI 1001
+ DWNG+G H NFST +MR GGI
Sbjct: 250 MGDWNGAGCHTNFSTAEMRAPGGI 273
>AC006618-2|AAK68249.1| 340|Caenorhabditis elegans Glutamine
synthetase (glutamate-ammonia ligase) protein 1 protein.
Length = 340
Score = 259 bits (635), Expect = 2e-69
Identities = 103/221 (46%), Positives = 154/221 (69%)
Frame = +2
Query: 290 YVWIDGSGEHVRCKDRTLNYIPETPKDLPIWNYXXXXXXXXXXXXXXXHLKPQAIYRDPF 469
Y+WID + E++R K +T ++ P+TP DLPIWN+ +++P A+YRDPF
Sbjct: 35 YIWIDATQENMRGKTKTFDFEPKTPSDLPIWNFDGTSTGQSLGEGSDVYIRPIALYRDPF 94
Query: 470 RRGNHVLVMCDTYDYSMQPTKTNHRIKCQEAYDRCRDHEPWFGIEQEYVLLDSDLRPFGW 649
R G + + +C+T + +P TN R +C + ++ +D EPWFG+EQE+ LL +D P+ W
Sbjct: 95 RPGPNKIALCETLTHDNKPHPTNTRQQCVDNMEKAKDQEPWFGMEQEFTLLGADKHPYNW 154
Query: 650 PTTGSPPAQGPYYCGVGANKVFARDLIEAHYKCCLYAGVPITGTNAEAMLSQWEFQVGPS 829
P G P QGPYYCGVG+++VF R ++EAHY+ C+YAG+ I+G+N E+M SQ+E+QVGP
Sbjct: 155 PVNGFPAPQGPYYCGVGSDRVFGRHILEAHYRACMYAGIKISGSNVESMPSQFEYQVGPC 214
Query: 830 VGVSAGDDLWIARFILHRLAEEFGVIVTFDPKPGVGLEWFG 952
G+ GD LW++R+ILHR+ E++GV+ + DPKP +G EW G
Sbjct: 215 EGIEMGDQLWVSRYILHRICEDYGVVCSLDPKPVLG-EWSG 254
Score = 28.7 bits (61), Expect = 8.2
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 930 VSDWNGSGAHHNFSTXKMR 986
+ +W+G+G H NFST MR
Sbjct: 249 LGEWSGAGCHLNFSTNVMR 267
>U41009-1|AAA82278.3| 501|Caenorhabditis elegans Hypothetical
protein C06E7.2 protein.
Length = 501
Score = 31.1 bits (67), Expect = 1.5
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -1
Query: 939 NPTPGLGSKVTMTPNSSARRCRIKRAIHRSSPADTPTEGPTWNSHCESIASAFVP 775
+P P G+KV+ P+S A + + + +PT+ P+ +S S A++F P
Sbjct: 314 DPRPPFGTKVSSRPSSKASKLNEQFNQKHKASTPSPTKKPSESSVTPSSATSFKP 368
>AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical
protein Y46G5A.1a protein.
Length = 1085
Score = 29.1 bits (62), Expect = 6.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 918 TPNRVSDWNGSGAHHNFSTXKMRXEG 995
T R SDWNGS AH + +T ++ G
Sbjct: 1045 TNTRDSDWNGSAAHISTATSRITHSG 1070
>Z81537-2|CAB04373.1| 682|Caenorhabditis elegans Hypothetical
protein F41D3.2 protein.
Length = 682
Score = 28.7 bits (61), Expect = 8.2
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +2
Query: 611 YVLLDSDLRPFGWPT-TGSPPAQGPYYCGVGANKVFARDLIEAHYKCCLYAGVPITGT 781
Y + +SD PFGW TG P+ G Y V N A H +C A + I G+
Sbjct: 429 YCVYESDTGPFGWCNHTGLSPS-GKYKIAVFGNSWAANHGEMIHQECGHKAKIIIQGS 485
>Z81062-13|CAB82210.1| 333|Caenorhabditis elegans Hypothetical
protein F15A4.13 protein.
Length = 333
Score = 28.7 bits (61), Expect = 8.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 486 TWFPRRNGSLYMAWGFRCVSEFVLVV 409
TWFPR ++ A F CV +F+L +
Sbjct: 142 TWFPRDLFRIFNAQSFYCVIDFILKI 167
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,445,400
Number of Sequences: 27780
Number of extensions: 556687
Number of successful extensions: 1503
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1503
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3140771858
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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