Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_P04
         (1110 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071639-1|AAL49261.1|  259|Drosophila melanogaster RE68357p pro...   127   2e-29
AE014296-1166|AAF50633.1|  259|Drosophila melanogaster CG10075-P...   127   2e-29
BT011122-1|AAR82789.1|  201|Drosophila melanogaster LD11394p pro...    29   8.7  

>AY071639-1|AAL49261.1|  259|Drosophila melanogaster RE68357p
           protein.
          Length = 259

 Score =  127 bits (307), Expect = 2e-29
 Identities = 66/152 (43%), Positives = 92/152 (60%)
 Frame = +3

Query: 378 GIIKCNKIYREHSTVAAEDSYVKKFMKAVGWMDQDRTRLKLTGYFLYESIHANIVYEEWF 557
           G++      +  +  AAE   +K+ +  VG+    + RLK+T + LYES+   I Y  +F
Sbjct: 46  GVVDNTNKTKPGTAEAAEGGILKRVLNKVGFTPNTKARLKVTSHLLYESVADKINYVTFF 105

Query: 558 EKLELPDTLASWFSITELHVWLLMVRYMAEDIAHTAKEKKTYVKGDGHFVRNCIVEALWA 737
               LP+T  SWF +TELHVWLL++R MAE  + T +        DG F+RNCIVEA+W 
Sbjct: 106 RDFNLPNTFNSWFLVTELHVWLLLMRSMAEG-SETGE--------DGRFLRNCIVEAMWG 156

Query: 738 DVSSRIKLLEGANPSIAKKQVSELSEQFQAAL 833
           DV++R K L   NPS  ++Q+  LSEQFQAAL
Sbjct: 157 DVNTRAKKLGAHNPSRTRQQIETLSEQFQAAL 188



 Score = 60.5 bits (140), Expect = 4e-09
 Identities = 26/67 (38%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
 Frame = +1

Query: 790 RNKYQSSLNNFKLPLVAYDEG-LSDDKILAAAIWRRFYSLSENTDVENVEKMVSFIRRQI 966
           R + ++    F+  L+AYDEG +SDD++LA A+WRRF+ ++ + D   +E++V ++R+Q 
Sbjct: 174 RQQIETLSEQFQAALIAYDEGIMSDDRVLACALWRRFFEMNCD-DYAQIERLVKYVRQQA 232

Query: 967 LILDKYP 987
            +LD  P
Sbjct: 233 SMLDSLP 239


>AE014296-1166|AAF50633.1|  259|Drosophila melanogaster CG10075-PA
           protein.
          Length = 259

 Score =  127 bits (307), Expect = 2e-29
 Identities = 66/152 (43%), Positives = 92/152 (60%)
 Frame = +3

Query: 378 GIIKCNKIYREHSTVAAEDSYVKKFMKAVGWMDQDRTRLKLTGYFLYESIHANIVYEEWF 557
           G++      +  +  AAE   +K+ +  VG+    + RLK+T + LYES+   I Y  +F
Sbjct: 46  GVVDNTNKTKPGTAEAAEGGILKRVLNKVGFTPNTKARLKVTSHLLYESVADKINYVTFF 105

Query: 558 EKLELPDTLASWFSITELHVWLLMVRYMAEDIAHTAKEKKTYVKGDGHFVRNCIVEALWA 737
               LP+T  SWF +TELHVWLL++R MAE  + T +        DG F+RNCIVEA+W 
Sbjct: 106 RDFNLPNTFNSWFLVTELHVWLLLMRSMAEG-SETGE--------DGRFLRNCIVEAMWG 156

Query: 738 DVSSRIKLLEGANPSIAKKQVSELSEQFQAAL 833
           DV++R K L   NPS  ++Q+  LSEQFQAAL
Sbjct: 157 DVNTRAKKLGAHNPSRTRQQIETLSEQFQAAL 188



 Score = 60.5 bits (140), Expect = 4e-09
 Identities = 26/67 (38%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
 Frame = +1

Query: 790 RNKYQSSLNNFKLPLVAYDEG-LSDDKILAAAIWRRFYSLSENTDVENVEKMVSFIRRQI 966
           R + ++    F+  L+AYDEG +SDD++LA A+WRRF+ ++ + D   +E++V ++R+Q 
Sbjct: 174 RQQIETLSEQFQAALIAYDEGIMSDDRVLACALWRRFFEMNCD-DYAQIERLVKYVRQQA 232

Query: 967 LILDKYP 987
            +LD  P
Sbjct: 233 SMLDSLP 239


>BT011122-1|AAR82789.1|  201|Drosophila melanogaster LD11394p
           protein.
          Length = 201

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -2

Query: 704 KMTISFNICFLLFGCMSYVLSHVSDHQQPHM*FCYAKP 591
           ++ + F I F LF C++  +SH+S+   P +   YA P
Sbjct: 13  QLKMKFLIAFALFACVAADVSHLSNEYLPPVQSSYAAP 50


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,186,073
Number of Sequences: 53049
Number of extensions: 863472
Number of successful extensions: 1896
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1892
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5780601582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)