Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_P04
         (1110 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21324-8|AAA62561.1|  190|Caenorhabditis elegans Hypothetical pr...    38   0.013
AC024798-12|AAK29920.2| 1725|Caenorhabditis elegans Hypothetical...    32   0.64 
Z68316-2|CAA92681.1|  352|Caenorhabditis elegans Hypothetical pr...    31   1.5  
Z81497-6|CAB04082.2|  604|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z75953-5|CAB00102.2|  604|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z72506-5|CAA96616.2|  259|Caenorhabditis elegans Hypothetical pr...    29   4.5  

>U21324-8|AAA62561.1|  190|Caenorhabditis elegans Hypothetical
           protein C35D10.5 protein.
          Length = 190

 Score = 37.9 bits (84), Expect = 0.013
 Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
 Frame = +1

Query: 841 YDEG-LSDDKILAAAIWRRFYSLSENTDVENVEKMVSFIRRQILILD 978
           YDEG L DD++LA AIWR  Y ++   D  ++ K+V+++R  +  L+
Sbjct: 123 YDEGFLHDDRVLAGAIWRCLY-MNREVDPIHLLKVVTYMRSTVAWLE 168



 Score = 37.1 bits (82), Expect = 0.022
 Identities = 18/84 (21%), Positives = 44/84 (52%)
 Frame = +3

Query: 513 LYESIHANIVYEEWFEKLELPDTLASWFSITELHVWLLMVRYMAEDIAHTAKEKKTYVKG 692
           LY +   N  + +  E   L D ++SW+ +T +H W++++R       H+  + K Y++ 
Sbjct: 23  LYYNCADNYDFAKLCEAFGLGDYMSSWYKLTLMHTWMVLMR------LHSEFDGKAYMR- 75

Query: 693 DGHFVRNCIVEALWADVSSRIKLL 764
               ++  ++  +W D+ +R+ ++
Sbjct: 76  ----LQRGLLSTMWLDIDNRLGIV 95


>AC024798-12|AAK29920.2| 1725|Caenorhabditis elegans Hypothetical
           protein Y48G9A.1 protein.
          Length = 1725

 Score = 32.3 bits (70), Expect = 0.64
 Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
 Frame = +1

Query: 826 LPLV--AYDEGLSDDKILAAAIWRRFYSLSENTDVE-NVEKMVSFIRRQIL 969
           +P+V  A+++ LS+ + +AA I    YSL+EN D+E  +  MV  ++R +L
Sbjct: 677 MPIVRRAFEDRLSETRRVAAQIISNIYSLTENKDMEPYLAHMVPGLQRSLL 727


>Z68316-2|CAA92681.1|  352|Caenorhabditis elegans Hypothetical
           protein K08E4.3 protein.
          Length = 352

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -1

Query: 495 LNEFC-PDPSIRRLS*TSLHSYLQQQLCCVLDKSYCT 388
           L+ FC PDPS  +   T L  Y  ++ CC  D   CT
Sbjct: 233 LSGFCSPDPSFGKPCSTILGDYFSKRFCCKSDPMECT 269


>Z81497-6|CAB04082.2|  604|Caenorhabditis elegans Hypothetical
           protein F10C2.3 protein.
          Length = 604

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
 Frame = +3

Query: 432 DSYVKKFMKAVGWMDQDRTRLKLT-GYFLYESIHANIVYEEWFEKLELPDTLASWFSITE 608
           D Y + +   V W    R    L  G     ++  N + +   +  + P    SW  +TE
Sbjct: 292 DHYFRPYWLNVYWTYVHRRSRNLCYGNHRMHNLQLNYLSQFVSKYKDQPKFAISW--LTE 349

Query: 609 L-HVWLLMVRYMAEDIAHTAKE 671
           L H WL  VRY  ED+A+  K+
Sbjct: 350 LGHDWLNQVRYGDEDLANFLKK 371


>Z75953-5|CAB00102.2|  604|Caenorhabditis elegans Hypothetical
           protein F10C2.3 protein.
          Length = 604

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
 Frame = +3

Query: 432 DSYVKKFMKAVGWMDQDRTRLKLT-GYFLYESIHANIVYEEWFEKLELPDTLASWFSITE 608
           D Y + +   V W    R    L  G     ++  N + +   +  + P    SW  +TE
Sbjct: 292 DHYFRPYWLNVYWTYVHRRSRNLCYGNHRMHNLQLNYLSQFVSKYKDQPKFAISW--LTE 349

Query: 609 L-HVWLLMVRYMAEDIAHTAKE 671
           L H WL  VRY  ED+A+  K+
Sbjct: 350 LGHDWLNQVRYGDEDLANFLKK 371


>Z72506-5|CAA96616.2|  259|Caenorhabditis elegans Hypothetical
           protein F07A5.4 protein.
          Length = 259

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 13/33 (39%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
 Frame = +1

Query: 736 LMFLVG-LSY*RVQIHQLQRNKYQSSLNNFKLP 831
           L+F +G + Y  +QI++LQ N+++  LN+ +LP
Sbjct: 16  LLFSIGWIFYQNIQINELQINRHKRELNSNRLP 48


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,852,910
Number of Sequences: 27780
Number of extensions: 472860
Number of successful extensions: 995
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 3002662306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)