Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_P03
         (1137 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0208 + 26385379-26385485,26385819-26385965,26385994-263860...   218   6e-57
06_02_0023 + 10702040-10702364,10702530-10702747,10703643-107041...    29   6.8  

>05_06_0208 +
           26385379-26385485,26385819-26385965,26385994-26386035,
           26386231-26386275,26386375-26386544,26386779-26386864,
           26386953-26387060,26387680-26387809,26388144-26388231,
           26388511-26388555,26388639-26388808,26388931-26389016,
           26389115-26389222,26389332-26389381,26389521-26389725
          Length = 528

 Score =  218 bits (533), Expect = 6e-57
 Identities = 116/277 (41%), Positives = 172/277 (62%), Gaps = 30/277 (10%)
 Frame = +3

Query: 201 MAKSSFEYVKK-FEHDDSLLPNTWIVIRLDGKCFHK-----FADDHNFTKPNDLRALKLM 362
           MA S +EYVK+ FE D  L P+ WIV+R+DG  FH+     F+  H F KPND RAL+LM
Sbjct: 1   MANSEYEYVKREFELDSLLPPSNWIVVRIDGCHFHRILFVRFSKIHTFEKPNDERALRLM 60

Query: 363 NYAAYTVLKEYSDILLSFGQSDEYS--------------FVLRKDSCLYKRRSAKLLTTI 500
           N  A ++L+++ DI+ ++G SDEYS              FV R+++  Y+RR +K+L+  
Sbjct: 61  NACATSMLEKFPDIVFAYGVSDEYSLNFSRVLSLFFLQSFVFREETEFYQRRESKILSLC 120

Query: 501 NSKFSSSYVFYWNKFFEHLPLKYPPCFDGRIVLYPCDENLIDYMKWRQADVHINNLYNTT 680
            S F+S YV  W  FF +  LK PP FDGR+V YP  + + DY+ WRQ D HINN YNT 
Sbjct: 121 VSYFTSVYVMKWKDFFPNKELKEPPYFDGRVVCYPNLKTIRDYLAWRQVDCHINNQYNTC 180

Query: 681 FWTLILKGQLTPVQAEKRLSGTVSADKNEILFQEFNMNYNNEPEIFKRGTILLRKSI--- 851
           FW+L+  G+ T  +A++ L GT S DKNE+L Q+F +NY++EP IF++G+ + R  +   
Sbjct: 181 FWSLVKSGK-TEKEAQQALKGTFSKDKNELLSQQFQINYDDEPAIFRKGSCVYRDKVETM 239

Query: 852 -----LHNKVNKS--IIVDVHDDMLKDKFWKENIYIL 941
                  N + ++  +I + + D++  +FW+ + YIL
Sbjct: 240 VKTDRCGNPIKRTRLVITNANVDIIGPEFWENHPYIL 276



 Score =  151 bits (365), Expect = 1e-36
 Identities = 67/168 (39%), Positives = 111/168 (66%)
 Frame = +3

Query: 348 ALKLMNYAAYTVLKEYSDILLSFGQSDEYSFVLRKDSCLYKRRSAKLLTTINSKFSSSYV 527
           AL+LMN +A  +++ + DI+  +G S+EYSFV +  + LY+R+ + +L++  S+F+  Y+
Sbjct: 279 ALRLMNASASLMMESFPDIVFGYGFSNEYSFVFQDKTELYQRQESLILSSCTSRFTLFYM 338

Query: 528 FYWNKFFEHLPLKYPPCFDGRIVLYPCDENLIDYMKWRQADVHINNLYNTTFWTLILKGQ 707
             W  FF +  L  PP F+  ++ YP  + L DY+  RQA+ H  N Y+T FW L+  G+
Sbjct: 339 MKWKDFFPNKDLVEPPHFEAELLCYPKQKILCDYLSSRQAECHTTNQYSTCFWMLVKSGK 398

Query: 708 LTPVQAEKRLSGTVSADKNEILFQEFNMNYNNEPEIFKRGTILLRKSI 851
            +  +A + L GT+S DKNE+LFQ+F++NYNNEP +F++G+   R+ +
Sbjct: 399 -SENEAREILKGTLSKDKNELLFQQFHLNYNNEPAVFRKGSCTYRQKV 445


>06_02_0023 +
           10702040-10702364,10702530-10702747,10703643-10704190,
           10704272-10704523,10704611-10704721,10704812-10704893,
           10704969-10705061,10705146-10705340
          Length = 607

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = +3

Query: 636 WRQADVHINNLYNTTFWTLILKGQLTPVQAEKRLSGTVSADKN 764
           W+   +HI NL     W   +    TP   EKR   +  A KN
Sbjct: 95  WKNVSIHIKNLMWEVEWDKFVAKMTTPKALEKRKKMSDLAKKN 137


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,898,436
Number of Sequences: 37544
Number of extensions: 493728
Number of successful extensions: 946
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3444772820
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)