BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_O21
(1207 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 36 0.084
05_01_0142 - 940421-940701,941262-941574 35 0.11
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 33 0.16
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 34 0.19
07_01_0479 + 3606663-3607448 33 0.34
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 33 0.45
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 32 0.78
12_02_0299 - 17051570-17052474,17053542-17053755 30 1.8
09_04_0684 - 19442335-19442990,19443774-19443839,19443935-194440... 31 1.8
05_06_0282 + 26915249-26915881 31 1.8
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 31 2.4
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 31 2.4
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 30 3.2
01_01_0796 + 6190931-6192745 30 3.2
07_03_1136 + 24218601-24218734,24218769-24219906 30 4.2
06_03_1363 - 29576265-29577575 27 5.0
12_01_0239 - 1793612-1793716,1793808-1793826,1794424-1794599,179... 29 5.5
11_01_0242 - 1862106-1862210,1862302-1862320,1863082-1863257,186... 29 7.3
09_02_0543 + 10427321-10428315,10428440-10429154 29 9.7
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 35.5 bits (78), Expect = 0.084
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = -2
Query: 1206 PPXPGPFXXVXXPXXGXXXAPXVFFPXXXPPXXGGXPXXXPPXGGXXXXPXXPXP 1042
PP P P G P P PP G P PP GG P P P
Sbjct: 328 PPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPP 382
Score = 35.1 bits (77), Expect = 0.11
Identities = 27/85 (31%), Positives = 28/85 (32%)
Frame = -2
Query: 1206 PPXPGPFXXVXXPXXGXXXAPXVFFPXXXPPXXGGXPXXXPPXGGXXXXPXXPXPXXPGX 1027
PP P P P AP PP G P P G P P P P
Sbjct: 316 PPPPKPAAAAPPPPPPPKAAPP-------PPPPKGPPPPPPAKG----PPPPPPPKGPSP 364
Query: 1026 PXXPXXGXXRXGAPKXXXPPFPGGG 952
P P G + G P PP P GG
Sbjct: 365 PPPPPPGGKKGGPP----PPPPKGG 385
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = -2
Query: 1098 PXXXPPXGGXXXXPXXPXPXXPGXPXXPXXGXXRXGAPKXXXPPFPGGGPXP 943
P PP P P P P P G K PP P GP P
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSP 364
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 35.1 bits (77), Expect = 0.11
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = -2
Query: 1119 PPXXGGXPXXXPPXGGXXXXPXXPXPXXPG-XPXXPXXGXXRXGAPKXXXPPFPGGGP 949
PP G P PP G P P PG P P + G P+ P PGG P
Sbjct: 30 PPHQGYPPQGYPPPPGAYPPPPGAYPPPPGAYPPPPGAYPPQHGYPQPGGYPPPGGYP 87
>08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 33.5 bits (73), Expect = 0.34
Identities = 33/133 (24%), Positives = 38/133 (28%)
Frame = -2
Query: 1098 PXXXPPXGGXXXXPXXPXPXXPGXPXXPXXGXXRXGAPKXXXPPFPGGGPXPXXXXKXXX 919
P PP GG P P P P P G P+ PPF P P
Sbjct: 9 PHPPPPQGGFPPQPPPMNPYGPPPPQQPAYG--HMPPPQGAPPPFLAPPPPPPPGPPPPH 66
Query: 918 XXXXXPGTXXGSHXXW*XGXCRLXWXPXKP*PPPFXXXSXFFPAL*XXVXPTPPXXXSXL 739
G ++ + P P PPP+ S P P PP
Sbjct: 67 QPQFNFGPGPPQQQQ-PPPPPQMYYQPPPP-PPPYGVNSSQPP----PPPPPPPSPPPSA 120
Query: 738 XPXXPPLRGXPXP 700
P PP P P
Sbjct: 121 PPPPPPPPTQPPP 133
Score = 32.3 bits (70), Expect(2) = 0.16
Identities = 20/61 (32%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Frame = -3
Query: 1088 PPPLGGXXXXXXPPXPXXPGXXGXXXXG-XXGXGPPKXXXPLSPGXGRFLXAXXNXPPPP 912
PPP G PP P PG G GPP+ P P + PPPP
Sbjct: 42 PPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYY-----QPPPPP 96
Query: 911 P 909
P
Sbjct: 97 P 97
Score = 21.0 bits (42), Expect(2) = 0.16
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 923 PPPPPRTXEXXXEA 882
PPPPP T EA
Sbjct: 123 PPPPPPTQPPPREA 136
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 34.3 bits (75), Expect = 0.19
Identities = 24/83 (28%), Positives = 24/83 (28%)
Frame = -2
Query: 1203 PXPGPFXXVXXPXXGXXXAPXVFFPXXXPPXXGGXPXXXPPXGGXXXXPXXPXPXXPGXP 1024
P P P P G P P PP G P PP G P P P P
Sbjct: 161 PKPKPKPSPPKPKPGPKPKPPKPGPKPKPPKPGPKPKPKPPKPGPKPKPKPPKPGPKPKP 220
Query: 1023 XXPXXGXXRXGAPKXXXPPFPGG 955
P PK PP G
Sbjct: 221 GPPQP-WWPIPFPKPPCPPGADG 242
Score = 29.1 bits (62), Expect = 7.3
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = -2
Query: 1131 PXXXPPXXGGXPXXXPPXGGXXXXPXXPXPXXPGXPXXPXXGXXRXGAPKXXXPPFPGGG 952
P PP P PP G P P P P P G PP PG
Sbjct: 165 PKPSPPKPKPGPKPKPPKPGPKPKPPKPGPKPKPKPPKP-------GPKPKPKPPKPGPK 217
Query: 951 PXP 943
P P
Sbjct: 218 PKP 220
>07_01_0479 + 3606663-3607448
Length = 261
Score = 33.5 bits (73), Expect = 0.34
Identities = 22/63 (34%), Positives = 22/63 (34%)
Frame = -2
Query: 1131 PXXXPPXXGGXPXXXPPXGGXXXXPXXPXPXXPGXPXXPXXGXXRXGAPKXXXPPFPGGG 952
P PP G P P P P PG P P G R G P PPF G
Sbjct: 190 PPGVPPAFPGGPPPPPGPFMRGPPPMGPPQVRPGMPGGPPPG-MRPGMP---PPPFRPGM 245
Query: 951 PXP 943
P P
Sbjct: 246 PPP 248
Score = 32.3 bits (70), Expect = 0.78
Identities = 24/77 (31%), Positives = 26/77 (33%), Gaps = 2/77 (2%)
Frame = -1
Query: 1180 GXGPXXXXPXGXPXFF--PXGXPPXFXGXTPXXPPXWGGGGXXXXPPXXXXRXXXGSXGX 1007
G P P P F P G PP F G P P + G PP + G G
Sbjct: 172 GQMPPPMRPPQMPIPFQRPPGVPPAFPGGPPPPPGPFMRG----PPPMGPPQVRPGMPGG 227
Query: 1006 GXPXXGPQKXXPPFPRG 956
P P PPF G
Sbjct: 228 PPPGMRPGMPPPPFRPG 244
Score = 31.9 bits (69), Expect = 1.0
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = -2
Query: 1206 PPXPGPFXXVXXPXXGXXXAPXVFFPXXXPPXXGGXPXXXPPXGGXXXXPXXPXPXXPG 1030
PP PGPF P P + P PP G P PP P P P PG
Sbjct: 202 PPPPGPFMRGPPPMGPPQVRPGM--PGGPPP--GMRPGMPPPPFRPGMPPPPPGPQQPG 256
Score = 30.3 bits (65), Expect = 3.2
Identities = 26/92 (28%), Positives = 28/92 (30%), Gaps = 5/92 (5%)
Frame = -2
Query: 1203 PXPGPFXX-VXXPXXGXXXAPXVFFPXXXPPXXGGXPXXXPPXGGXXXXPXXPX--PXXP 1033
P PG + P AP V +P P G P P P P P
Sbjct: 139 PAPGMMQPQISRPPMPNLSAPPVAYPQVVRPPPGQMPPPMRPPQMPIPFQRPPGVPPAFP 198
Query: 1032 GXPXXPXXGXXRXGAPKXXXPPFPG--GGPXP 943
G P P R P PG GGP P
Sbjct: 199 GGPPPPPGPFMRGPPPMGPPQVRPGMPGGPPP 230
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 33.1 bits (72), Expect = 0.45
Identities = 23/67 (34%), Positives = 24/67 (35%), Gaps = 6/67 (8%)
Frame = -3
Query: 1088 PPPLGGXXXXXXPPXPXXP-GXXGXXXXGXXG--XGPPKXXXPLSPGXGR---FLXAXXN 927
PPP+GG PP P P G G G GPP P G
Sbjct: 1124 PPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVA 1183
Query: 926 XPPPPPR 906
PPPPPR
Sbjct: 1184 PPPPPPR 1190
Score = 31.1 bits (67), Expect = 1.8
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = -2
Query: 1131 PXXXPPXXGGXPXXXPPXGGXXXXPXXPXPXXPGXPXXPXXGXXRXGAPKXXXPPFPGGG 952
P PP G PP P P P G P GAP PP GG
Sbjct: 1160 PPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGP---PTPPGAPAPPMPPGVPGG 1216
Query: 951 PXP 943
P P
Sbjct: 1217 PPP 1219
Score = 29.9 bits (64), Expect = 4.2
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = +1
Query: 985 GGPXPXXPXXXXPXXPGXXGXGGXXXXXXPPXGGGXXGXXPXXXGXXXXEKNXGXXXGP 1161
G P P P P GG PP G G G P G G GP
Sbjct: 1159 GPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGP 1217
>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 32.3 bits (70), Expect = 0.78
Identities = 17/63 (26%), Positives = 19/63 (30%)
Frame = -3
Query: 1097 PXXPPPLGGXXXXXXPPXPXXPGXXGXXXXGXXGXGPPKXXXPLSPGXGRFLXAXXNXPP 918
P PPP G PP P P P P P + + PP
Sbjct: 548 PPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPP 607
Query: 917 PPP 909
PPP
Sbjct: 608 PPP 610
Score = 29.5 bits (63), Expect = 5.5
Identities = 22/65 (33%), Positives = 24/65 (36%)
Frame = -3
Query: 1097 PXXPPPLGGXXXXXXPPXPXXPGXXGXXXXGXXGXGPPKXXXPLSPGXGRFLXAXXNXPP 918
P PPPL PP P P PP P +PG G A PP
Sbjct: 621 PPPPPPLPNHSVLPPPPPPPPPPSLPNRLV------PP----PPAPGIGNKFPAPP-PPP 669
Query: 917 PPPRT 903
PPPR+
Sbjct: 670 PPPRS 674
Score = 29.1 bits (62), Expect = 7.3
Identities = 18/66 (27%), Positives = 18/66 (27%)
Frame = -3
Query: 1106 GXNPXXPPPLGGXXXXXXPPXPXXPGXXGXXXXGXXGXGPPKXXXPLSPGXGRFLXAXXN 927
G P PPPL P P P GP PL P
Sbjct: 688 GPPPPPPPPLPPANRTNGPGVPSAPPPPPPPPPANRSNGPSAPAPPLPPPLPAAANKRNP 747
Query: 926 XPPPPP 909
PPPP
Sbjct: 748 PAPPPP 753
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 29.9 bits (64), Expect = 4.2
Identities = 24/88 (27%), Positives = 24/88 (27%)
Frame = -2
Query: 1206 PPXPGPFXXVXXPXXGXXXAPXVFFPXXXPPXXGGXPXXXPPXGGXXXXPXXPXPXXPGX 1027
PP P P P AP FP P P PP P P P
Sbjct: 252 PPSPPP-PAFPFPLPPWPWAPPPAFPFPHLPPIFSPPSPPPPPPPAFPFPFPQLPPLPHF 310
Query: 1026 PXXPXXGXXRXGAPKXXXPPFPGGGPXP 943
P P P PP P P P
Sbjct: 311 PPLPSF-YPSPPPPPPPPPPPPPSFPWP 337
Score = 27.9 bits (59), Expect(2) = 1.8
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = -2
Query: 1146 PXVFFPXXXPPXXGGXPXXXPPXGGXXXXPXXPXPXXPGXPXXPXXGXXRXGAPKXXXPP 967
P F P PP P PP P P P P P P +P PP
Sbjct: 236 PPPFLPFPLPPIPFLTPPSPPPPA--FPFPLPPWPWAP-PPAFPFPHLPPIFSPPSPPPP 292
Query: 966 FPGGGPXP 943
P P P
Sbjct: 293 PPPAFPFP 300
Score = 21.8 bits (44), Expect(2) = 1.8
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -2
Query: 840 PXKP*PPPFXXXSXFFPAL*XXVXPTPPXXXSXLXPXXPPL 718
P P P F F+P+ P PP S P PPL
Sbjct: 302 PQLPPLPHFPPLPSFYPSPPPPPPPPPPPPPSFPWP-FPPL 341
>09_04_0684 - 19442335-19442990,19443774-19443839,19443935-19444032,
19444787-19445157
Length = 396
Score = 31.1 bits (67), Expect = 1.8
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = +1
Query: 958 PGERGXXX-FGGPXPXXPXXXXPXXPGXXGXG-GXXXXXXPPXGGGXXGXXPXXXG 1119
PG +G + GP P P PG G G G PP GG G P G
Sbjct: 310 PGYQGSNQGYQGPPPPPPSAYQGNNPGYQGGGPGYQGGNPPPYQGGNPGYAPGYHG 365
>05_06_0282 + 26915249-26915881
Length = 210
Score = 31.1 bits (67), Expect = 1.8
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -2
Query: 1059 PXXPXPXXPGXPXXPXXGXXRXGAPKXXXPPFPGGGPXP 943
P P P P P P G G P+ PP P G P P
Sbjct: 133 PAPPPPPDPNTPVQPLSGGD--GRPRQLAPPPPMGNPPP 169
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 30.7 bits (66), Expect = 2.4
Identities = 23/66 (34%), Positives = 23/66 (34%)
Frame = -3
Query: 1106 GXNPXXPPPLGGXXXXXXPPXPXXPGXXGXXXXGXXGXGPPKXXXPLSPGXGRFLXAXXN 927
G P PPP G PP P G PP PL PG G A
Sbjct: 270 GQVPAAPPPPAGPPPPAPPPLP-------PSHHHHHGHHPP-PPHPLPPGAG--AGAGTG 319
Query: 926 XPPPPP 909
PPPPP
Sbjct: 320 APPPPP 325
Score = 30.3 bits (65), Expect = 3.2
Identities = 22/77 (28%), Positives = 23/77 (29%), Gaps = 7/77 (9%)
Frame = -3
Query: 1118 PXXXGXNPXXPPPLGGXXXXXX-----PPXPXXPGXXGXXXXGXXGXGP--PKXXXPLSP 960
P G P PPPL PP P PG G P P P P
Sbjct: 277 PPPAGPPPPAPPPLPPSHHHHHGHHPPPPHPLPPGAGAGAGTGAPPPPPAHPAAPAPPPP 336
Query: 959 GXGRFLXAXXNXPPPPP 909
+ PPPPP
Sbjct: 337 APSPSAAGAGSGPPPPP 353
Score = 29.9 bits (64), Expect = 4.2
Identities = 19/67 (28%), Positives = 19/67 (28%), Gaps = 4/67 (5%)
Frame = -2
Query: 1131 PXXXPPXXGGXPXXXPPXGGXXXXPXXPXPXXPGXPXXPXXGXXRXGAPKXXXPPFPGG- 955
P P PP P P P PG P G G P PGG
Sbjct: 334 PPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPPALPGGP 393
Query: 954 ---GPXP 943
GP P
Sbjct: 394 RARGPPP 400
Score = 29.9 bits (64), Expect = 4.2
Identities = 21/70 (30%), Positives = 21/70 (30%)
Frame = +3
Query: 987 GPXXGXPXPXXPXXXRXXXXGGXXXXPPPPQXGGXXGVXPXXXGGXPXGKKXGXPXGXXX 1166
G G P P P G PPPP G GG P P G
Sbjct: 344 GAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRG------GGGP--PPPALPGGPRA 395
Query: 1167 XGPXPXKXXP 1196
GP P K P
Sbjct: 396 RGPPPFKKSP 405
Score = 29.1 bits (62), Expect = 7.3
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = -3
Query: 1088 PPPLGGXXXXXXPPXPXXPGXXGXXXXGXXGXGPPKXXXPLSPGXGRFLXAXXNXPPPP 912
PPP PP P G G GPP P +P R PPPP
Sbjct: 322 PPPPAHPAAPAPPPPAPSPSAAGA------GSGPPPPPPPAAPAAPRPPGPGPGPPPPP 374
>03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/60 (28%), Positives = 18/60 (30%)
Frame = -2
Query: 1131 PXXXPPXXGGXPXXXPPXGGXXXXPXXPXPXXPGXPXXPXXGXXRXGAPKXXXPPFPGGG 952
P PP P PP P P P G P G P+ PP GG
Sbjct: 269 PPQVPPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPPPPPPLANGPPRSIPPPPMTGG 328
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 30.3 bits (65), Expect = 3.2
Identities = 22/82 (26%), Positives = 23/82 (28%)
Frame = -2
Query: 1206 PPXPGPFXXVXXPXXGXXXAPXVFFPXXXPPXXGGXPXXXPPXGGXXXXPXXPXPXXPGX 1027
PP P P P P + P PP P PP P P P G
Sbjct: 1138 PPPPLPEGPPPLPSDSPPCQPPL--PPSPPP---ATPPPPPPLSPSLPPPPPPPPLPSGP 1192
Query: 1026 PXXPXXGXXRXGAPKXXXPPFP 961
P P P PP P
Sbjct: 1193 PPQPAPPPLPIQPPPIPPPPVP 1214
>01_01_0796 + 6190931-6192745
Length = 604
Score = 30.3 bits (65), Expect = 3.2
Identities = 19/64 (29%), Positives = 20/64 (31%), Gaps = 3/64 (4%)
Frame = -2
Query: 1206 PPXPGPFXXVXXPXXGXXXAPX-VFFPXXXPPXXGGXPXXXPPX--GGXXXXPXXPXPXX 1036
PP P P + P P P PP P PP GG P P P
Sbjct: 200 PPPPQPEQQLQLPQWPNLSGPHNQLLPVAPPPFVADQPPPPPPPAAGGSLWIPELPPPPV 259
Query: 1035 PGXP 1024
G P
Sbjct: 260 EGSP 263
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.9 bits (64), Expect = 4.2
Identities = 22/72 (30%), Positives = 22/72 (30%)
Frame = +3
Query: 957 PRGKGGXXFWGPXXGXPXPXXPXXXRXXXXGGXXXXPPPPQXGGXXGVXPXXXGGXPXGK 1136
P G GG G G P P GG PP P GG G GG G
Sbjct: 100 PLGGGGARPPGGGGGGGPPSLPPGA----GGGGGARPPAPGGGGGGGAPRRVLGGGGGGG 155
Query: 1137 KXGXPXGXXXXG 1172
P G G
Sbjct: 156 ALARPPGGGRGG 167
Score = 29.1 bits (62), Expect = 7.3
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = +2
Query: 1043 GXGXXGXXXXPPXGGXXXGXPPKXGGXXXGKKTXGAXXXPXXGXXTXXXGPGXGG 1207
G G G PP GG G P + G G G G G G GG
Sbjct: 162 GGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGGGGGLGGGGGEGG 216
>06_03_1363 - 29576265-29577575
Length = 436
Score = 26.6 bits (56), Expect(2) = 5.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 968 LSPGXGRFLXAXXNXPPPPP 909
++PG G+ L PPPPP
Sbjct: 376 VAPGGGKVLIVDVTPPPPPP 395
Score = 21.4 bits (43), Expect(2) = 5.0
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3
Query: 923 PPPPPRTXE 897
PPPPPR E
Sbjct: 406 PPPPPRMWE 414
>12_01_0239 - 1793612-1793716,1793808-1793826,1794424-1794599,
1794701-1794747,1795760-1796291
Length = 292
Score = 29.5 bits (63), Expect = 5.5
Identities = 23/83 (27%), Positives = 24/83 (28%), Gaps = 4/83 (4%)
Frame = -1
Query: 1204 PXXGXXXXGXGPXXXXPXGXPXFFPXGXPPXFXGXTPXXP-PXWGGGGXXXXPPXXXXRX 1028
P G G P P P G P G T P +GGGG PP
Sbjct: 13 PYGGAGGYGAPPPPYGSSPAPSAPPYGAKPPKEGKTSSSSAPYYGGGGGYGAPPSTQPYG 72
Query: 1027 XXGSXG---XGXPXXGPQKXXPP 968
G G P P PP
Sbjct: 73 SGGGYGAPPSSQPYGAPYGAPPP 95
>11_01_0242 - 1862106-1862210,1862302-1862320,1863082-1863257,
1863359-1863405,1864443-1865022
Length = 308
Score = 29.1 bits (62), Expect = 7.3
Identities = 21/75 (28%), Positives = 22/75 (29%), Gaps = 1/75 (1%)
Frame = -1
Query: 1204 PXXGXXXXGXGPXXXXPXGXPXFFPXGXPPXFXGXTPXXP-PXWGGGGXXXXPPXXXXRX 1028
P G G P P P G P G T P +GGGG PP
Sbjct: 13 PYGGAGGYGAPPPPYGSSPAPSAPPYGEKPPKEGKTSSSSAPYYGGGGGYGAPPSTQPYG 72
Query: 1027 XXGSXGXGXPXXGPQ 983
G G PQ
Sbjct: 73 SGGGYGAPPSTQRPQ 87
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 28.7 bits (61), Expect = 9.7
Identities = 22/87 (25%), Positives = 22/87 (25%)
Frame = -2
Query: 1203 PXPGPFXXVXXPXXGXXXAPXVFFPXXXPPXXGGXPXXXPPXGGXXXXPXXPXPXXPGXP 1024
P P P G P P PP PP P P P P
Sbjct: 20 PAPQATPPPAIPESGPPPPPAPDMPPP-PPTPAPQSSPAPPPAPDMTPPPGPGPAAAPSP 78
Query: 1023 XXPXXGXXRXGAPKXXXPPFPGGGPXP 943
P AP PP P P P
Sbjct: 79 HSPSPSNAPWVAPAADIPPPPPPPPNP 105
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,865,524
Number of Sequences: 37544
Number of extensions: 473199
Number of successful extensions: 1357
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1229
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3689769684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -