Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_O18
         (1144 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10990-8|AAB59173.2|  223|Caenorhabditis elegans Hypothetical pr...    29   6.1  
Z83107-6|CAD92391.1|  877|Caenorhabditis elegans Hypothetical pr...    29   8.1  
Z83107-5|CAD92390.1|  764|Caenorhabditis elegans Hypothetical pr...    29   8.1  
Z83107-4|CAB05498.1|  878|Caenorhabditis elegans Hypothetical pr...    29   8.1  

>L10990-8|AAB59173.2|  223|Caenorhabditis elegans Hypothetical
           protein C30A5.3 protein.
          Length = 223

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +1

Query: 685 YKXTRRFPLXAPXCALLFRPCRLPDTCPPFSLREAWRFLIA 807
           Y+  R+F +     ALL +   +P+TC   +  E W FL A
Sbjct: 71  YEHLRQFCIELNGLALLLQRECIPETCQQMTATEQWIFLCA 111


>Z83107-6|CAD92391.1|  877|Caenorhabditis elegans Hypothetical
           protein F32A7.5c protein.
          Length = 877

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 20/51 (39%), Positives = 25/51 (49%)
 Frame = -3

Query: 911 IVTG*GAXVGXNGGXVHTAQLGAXDLHRXEIPTA*AMRKRHASRREKGGQV 759
           IVT  G+    +G   H AQ G  D H+ EIP    M+ R +S  E G  V
Sbjct: 658 IVTSNGSETNGHGEQAHAAQNGGID-HQKEIPKHDLMQSR-SSVIENGAAV 706


>Z83107-5|CAD92390.1|  764|Caenorhabditis elegans Hypothetical
           protein F32A7.5b protein.
          Length = 764

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 20/51 (39%), Positives = 25/51 (49%)
 Frame = -3

Query: 911 IVTG*GAXVGXNGGXVHTAQLGAXDLHRXEIPTA*AMRKRHASRREKGGQV 759
           IVT  G+    +G   H AQ G  D H+ EIP    M+ R +S  E G  V
Sbjct: 530 IVTSNGSETNGHGEQAHAAQNGGID-HQKEIPKHDLMQSR-SSVIENGAAV 578


>Z83107-4|CAB05498.1|  878|Caenorhabditis elegans Hypothetical
           protein F32A7.5a protein.
          Length = 878

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 20/51 (39%), Positives = 25/51 (49%)
 Frame = -3

Query: 911 IVTG*GAXVGXNGGXVHTAQLGAXDLHRXEIPTA*AMRKRHASRREKGGQV 759
           IVT  G+    +G   H AQ G  D H+ EIP    M+ R +S  E G  V
Sbjct: 658 IVTSNGSETNGHGEQAHAAQNGGID-HQKEIPKHDLMQSR-SSVIENGAAV 706


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,944,387
Number of Sequences: 27780
Number of extensions: 199064
Number of successful extensions: 230
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 230
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3099034026
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)