Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_O17
(1234 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 42 1e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 42 2e-04
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 37 0.005
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.081
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 32 0.14
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.25
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.25
SPAC26A3.08 |smb1|smb|Sm snRNP core protein Smb1|Schizosaccharom... 30 0.76
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 1.8
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 4.0
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 7.1
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 9.3
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 9.3
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 42.3 bits (95), Expect = 1e-04
Identities = 21/53 (39%), Positives = 21/53 (39%)
Frame = +3
Query: 927 PPPPXXPXXGXKKPXXXPPPPPXXXXXGXPPXXPPPGGXGXXXXTGGGXXPPP 1085
PPPP P P PPP G PP PPPG G G PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPG------VAGAGPPPPP 779
Score = 41.5 bits (93), Expect = 2e-04
Identities = 19/44 (43%), Positives = 19/44 (43%)
Frame = +3
Query: 903 PXKXPPXXPPPPXXPXXGXKKPXXXPPPPPXXXXXGXPPXXPPP 1034
P P P PP P G P PPPPP G PP PPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPP---PPPPPGVAGAGPPPPPPPP 782
Score = 38.3 bits (85), Expect = 0.002
Identities = 24/74 (32%), Positives = 25/74 (33%), Gaps = 1/74 (1%)
Frame = +1
Query: 979 PPPPPXKXXXXXPXXXXPXGGXGXXPKXXGXGPPPPXGG-XGXGXPPPXXPPXXKKXXGX 1155
PPPPP P P P G PPPP G G G PPP PP G
Sbjct: 732 PPPPPPAVIVPTPAPA-PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGS 790
Query: 1156 XXXPXXPPPXKKKK 1197
P + K
Sbjct: 791 RYYAPAPQAEPEPK 804
Score = 35.5 bits (78), Expect = 0.015
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +3
Query: 978 PPPPPXXXXXGXPPXXPPPGGXGXXXXTGGGXXPPPXGGXGXGXTPPXXP 1127
PPPPP P P P G PPP G G G PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 34.3 bits (75), Expect = 0.035
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 752 PRGXPXPXPGXXXDXFPPPPPPPXXKXKKXPPP 850
P P P P PPPPPPP PPP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 33.1 bits (72), Expect = 0.081
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 927 PPPPXXPXXGXKKPXXXPPPPPXXXXXGXPPXXPPP 1034
PPPP P P PPPPP G P P
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 31.9 bits (69), Expect = 0.19
Identities = 22/69 (31%), Positives = 23/69 (33%), Gaps = 8/69 (11%)
Frame = +2
Query: 800 PPPPPP--------PXXKXKKXPPPXGGGXPGXXXKXQSXGXAXKXPPXXPPPPXGPXXX 955
PPPPPP P P P GG P G A PP PPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPP---PPPPPPGVAGAGPPPPPPPPPAVSAG 788
Query: 956 GKKTXXXPP 982
G + P
Sbjct: 789 GSRYYAPAP 797
Score = 30.7 bits (66), Expect = 0.43
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -1
Query: 1135 PXXGXXGGVXPXPXPPXGGGXXPPPVXXXXPXPPGGG 1025
P GG P P PP G PPP P GG
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 29.9 bits (64), Expect = 0.76
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 488 PPPXXXGXGPPPXPXFPXXPXFXXFFFXXXPPPPPXXFXXGG 363
PPP GPPP P P PPPPP GG
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGP----PPPPPPPPAVSAGG 789
Score = 29.9 bits (64), Expect = 0.76
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 764 PXPXPGXXXDXFPPPPPPP 820
P P PG PPPPPPP
Sbjct: 764 PPPPPGVAGAGPPPPPPPP 782
Score = 29.1 bits (62), Expect = 1.3
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -3
Query: 488 PPPXXXGXGPPPXPXFPXXPXFXXFFFXXXPPPPPXXFXXGGGXPP 351
PPP P P P P P PPPPP G G PP
Sbjct: 735 PPPAVIVPTPAPAP-IPVPPPAPIMGGPPPPPPPPG--VAGAGPPP 777
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = -3
Query: 488 PPPXXXGXGPPPXPXFPXXPXFXXFFFXXXPPPPPXXFXXGGGXPP 351
PPP P P P P PPPPP G PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 27.5 bits (58), Expect = 4.0
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 764 PXPXPGXXXDXFPPPPPPP 820
P P P PPPPPPP
Sbjct: 763 PPPPPPGVAGAGPPPPPPP 781
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 41.9 bits (94), Expect = 2e-04
Identities = 32/119 (26%), Positives = 34/119 (28%), Gaps = 8/119 (6%)
Frame = +2
Query: 800 PPPPPPPXXKXKKXPPPXGGGXPGXXXKXQSXGXAXKXPPXXPPPP--XGPXXXGKKTXX 973
PPP PPP PP P + PP PP K
Sbjct: 253 PPPIPPP-SNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRP 311
Query: 974 XPPPPPXXXXKXXPP------XXXXPXGXGXXXXNXXGXXPPPPGGXGGRXXPPPXXXP 1132
PPPPP + PP P N G P PP G PPP P
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 38.7 bits (86), Expect = 0.002
Identities = 25/84 (29%), Positives = 27/84 (32%), Gaps = 10/84 (11%)
Frame = +1
Query: 910 KXPPXAPPPRXXRXX-----GXKNXXXPPPPPPXKXXXXXPXXXXPXGGXGXXPKXXGXG 1074
+ PP PP R R G N PPPPPP + P G P
Sbjct: 310 RPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSA 369
Query: 1075 P-----PPPXGGXGXGXPPPXXPP 1131
P PPP PP PP
Sbjct: 370 PSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/79 (27%), Positives = 26/79 (32%), Gaps = 7/79 (8%)
Frame = +2
Query: 803 PPPPPPXXKXKKXPPPXGGG-------XPGXXXKXQSXGXAXKXPPXXPPPPXGPXXXGK 961
PPPPPP + + PP G G P + + G P PP P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 962 KTXXXPPPPPXXXXKXXPP 1018
T PPP PP
Sbjct: 371 STGRQPPPLSSSRAVSNPP 389
Score = 35.9 bits (79), Expect = 0.012
Identities = 25/90 (27%), Positives = 28/90 (31%), Gaps = 8/90 (8%)
Frame = +2
Query: 737 PXXNPPRGXPXPXPGXXXDXFPPPPPPPXXKXK-KXP-PPXGGGXPGXXXKXQSXGXAXK 910
P RG P G PPPPPPP P PP G P + +
Sbjct: 316 PPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQ 375
Query: 911 XPPXXP------PPPXGPXXXGKKTXXXPP 982
PP PP P G+ PP
Sbjct: 376 PPPLSSSRAVSNPPAPPPAIPGRSAPALPP 405
Score = 32.7 bits (71), Expect = 0.11
Identities = 25/100 (25%), Positives = 26/100 (26%)
Frame = +3
Query: 882 KXKAGGGPXKXPPXXPPPPXXPXXGXKKPXXXPPPPPXXXXXGXPPXXPPPGGXGXXXXT 1061
+ A G P PP P PPP PP PPP G
Sbjct: 344 RSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPP-APPPAIPGR---- 398
Query: 1062 GGGXXPPPXGGXGXGXTPPXXPXXGXKXXXGXXXPPXXPP 1181
PP G TPP PP PP
Sbjct: 399 -SAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPP 437
Score = 31.5 bits (68), Expect = 0.25
Identities = 18/66 (27%), Positives = 18/66 (27%)
Frame = +2
Query: 749 PPRGXPXPXPGXXXDXFPPPPPPPXXKXKKXPPPXGGGXPGXXXKXQSXGXAXKXPPXXP 928
PP P P PP PP PP P A PP P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 929 PPPXGP 946
PP P
Sbjct: 475 APPPAP 480
Score = 30.7 bits (66), Expect = 0.43
Identities = 21/69 (30%), Positives = 21/69 (30%), Gaps = 1/69 (1%)
Frame = +1
Query: 916 PPXAPPP-RXXRXXGXKNXXXPPPPPPXKXXXXXPXXXXPXGGXGXXPKXXGXGPPPPXG 1092
PP PP R N PPPPPP P G G PPPP
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRR----NRGKPPIGNGSSNSSLPPPPPPPRS 345
Query: 1093 GXGXGXPPP 1119
P P
Sbjct: 346 NAAGSIPLP 354
Score = 29.5 bits (63), Expect = 1.0
Identities = 30/151 (19%), Positives = 35/151 (23%), Gaps = 2/151 (1%)
Frame = +1
Query: 622 PPXXRGPPXXXGPGGXXXXXXPGGXXRPPPXGGXKXXXSPXKPPPGXP--XPPPXXGXGX 795
PP R P P P +PPP + +P PPP P P G
Sbjct: 354 PPQGRSAPPPPPPRSA-----PSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGN 408
Query: 796 FSXXXXXXXXKXKKXPPPXXGXXXXEXXXKXKXGXGPXKXPPXAPPPRXXRXXGXKNXXX 975
S PP G P + P G
Sbjct: 409 ASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Query: 976 PPPPPPXKXXXXXPXXXXPXGGXGXXPKXXG 1068
PP P P P P+ G
Sbjct: 469 LPPAAPAPPPAPAPAPAAPVASIAELPQQDG 499
Score = 28.7 bits (61), Expect = 1.8
Identities = 18/68 (26%), Positives = 18/68 (26%), Gaps = 1/68 (1%)
Frame = +3
Query: 927 PPPPXXPXXGXKKPXXXPPPPPXXXXXGXPPXXP-PPGGXGXXXXTGGGXXPPPXGGXGX 1103
PP P P P PP P G P P PP G PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 1104 GXTPPXXP 1127
P P
Sbjct: 475 APPPAPAP 482
Score = 28.3 bits (60), Expect = 2.3
Identities = 24/102 (23%), Positives = 26/102 (25%), Gaps = 8/102 (7%)
Frame = +1
Query: 901 GPXKXPPXAPP----PRXXRXXGXKNXXXPPPPPPXKXXXXXPXXXXPXGGXGXXPKXXG 1068
G PP +PP P P PPP + P
Sbjct: 262 GTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRN 321
Query: 1069 XGPPPPXGGXGXGXPPPXXPPXXKKXXGXXXXP----XXPPP 1182
G PP G PP PP G P PPP
Sbjct: 322 RGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPP 363
Score = 26.6 bits (56), Expect = 7.1
Identities = 22/97 (22%), Positives = 25/97 (25%), Gaps = 6/97 (6%)
Frame = +2
Query: 845 PPXGGGXPGXXXKXQSXGXAXKXPPXXPPPPXGPXXXGKKTXXXPPPP----PXXXXKXX 1012
PP P + + PP PPP G + P P P
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSK 289
Query: 1013 PPXXXXP--XGXGXXXXNXXGXXPPPPGGXGGRXXPP 1117
PP N PPPP R PP
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPP 326
Score = 26.6 bits (56), Expect = 7.1
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 3/42 (7%)
Frame = +3
Query: 915 PPXXP---PPPXXPXXGXKKPXXXPPPPPXXXXXGXPPXXPP 1031
PP P PP P P P PPP PP PP
Sbjct: 233 PPSIPSSRPPERVP--SLSAPAPPPIPPPSNGTVSSPPNSPP 272
Score = 26.2 bits (55), Expect = 9.3
Identities = 23/100 (23%), Positives = 23/100 (23%), Gaps = 7/100 (7%)
Frame = +3
Query: 903 PXKXPPXXPPPPXXPXXGXKKPXXXPPPP-------PXXXXXGXPPXXPPPGGXGXXXXT 1061
P P PP P P PP P P PP PP
Sbjct: 246 PSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALA 305
Query: 1062 GGGXXPPPXGGXGXGXTPPXXPXXGXKXXXGXXXPPXXPP 1181
PPP P G PP PP
Sbjct: 306 ANKKRPPPP--PPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 37.1 bits (82), Expect = 0.005
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +2
Query: 737 PXXNPPRGXPXPXPGXXXDXFPPPPPPP-XXKXKKXPPPXGGG 862
P NPP P P PG PPPPPPP K +K P G
Sbjct: 5 PPGNPP--PPPPPPGFEPPSQPPPPPPPGYVKKRKNKTPAQSG 45
Score = 32.7 bits (71), Expect = 0.11
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 914 PPXXPPPPXGPXXXGKKTXXXPPPPPXXXXK 1006
PP PPPP P + PPPPP K
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPGYVKK 35
Score = 31.5 bits (68), Expect = 0.25
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 903 PXKXPPXXPPPPXXPXXGXKKPXXXPPPPP 992
P PP PPPP G + P PPPPP
Sbjct: 5 PPGNPPPPPPPP-----GFEPPSQPPPPPP 29
Score = 31.5 bits (68), Expect = 0.25
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 978 PPPPPXXXXXGXPPXXPPPG 1037
PPPPP PP PPPG
Sbjct: 12 PPPPPGFEPPSQPPPPPPPG 31
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 1075 PPPPXGGXGXGXPPPXXPPXXKK 1143
PPPP G PPP PP K
Sbjct: 12 PPPPPGFEPPSQPPPPPPPGYVK 34
Score = 26.6 bits (56), Expect = 7.1
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +1
Query: 685 PGGXXRPPPXGGXKXXXSPXKPPP 756
PG PPP G + P PPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +1
Query: 1105 GXPPPXXPPXXKKXXGXXXXPXXPPPXKKKKKK 1203
G PPP PP + P P KK+K K
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPPGYVKKRKNK 39
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.1 bits (72), Expect = 0.081
Identities = 23/97 (23%), Positives = 24/97 (24%)
Frame = +3
Query: 891 AGGGPXKXPPXXPPPPXXPXXGXKKPXXXPPPPPXXXXXGXPPXXPPPGGXGXXXXTGGG 1070
+G P P PP P P PP G PP P G
Sbjct: 1118 SGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSG 1177
Query: 1071 XXPPPXGGXGXGXTPPXXPXXGXKXXXGXXXPPXXPP 1181
P P G PP PP PP
Sbjct: 1178 IPPVPKPAAGVPPVPPPSEAP-PVPKPSVGVPPVPPP 1213
Score = 30.7 bits (66), Expect = 0.43
Identities = 24/113 (21%), Positives = 24/113 (21%)
Frame = +3
Query: 843 PPXXGXGXXGXXXKXKAGGGPXKXPPXXPPPPXXPXXGXKKPXXXPPPPPXXXXXGXPPX 1022
PP K P P PP P P PP G PP
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP- 1141
Query: 1023 XPPPGGXGXXXXTGGGXXPPPXGGXGXGXTPPXXPXXGXKXXXGXXXPPXXPP 1181
P P G P P P PP PP
Sbjct: 1142 VPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 29.9 bits (64), Expect = 0.76
Identities = 26/111 (23%), Positives = 27/111 (24%), Gaps = 3/111 (2%)
Frame = +2
Query: 614 PXNPPXXGVPPGXXAPGGXXXXXXXGGXGXPPXXGXKKXXFPXXNPPRGXPXPXPGXXXD 793
P P G PP P G PP P P P P P
Sbjct: 1150 PPVPAPSGAPP-VPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVP 1208
Query: 794 XFPPP---PPPPXXKXKKXPPPXGGGXPGXXXKXQSXGXAXKXPPXXPPPP 937
PPP PP P P P S + P P P
Sbjct: 1209 PVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSP 1259
Score = 29.1 bits (62), Expect = 1.3
Identities = 23/84 (27%), Positives = 23/84 (27%), Gaps = 3/84 (3%)
Frame = +3
Query: 843 PPXXGXGXXGXXXKXKAGGGPXKXPPXXPPPPXXPXXGXKKPXXXPP---PPPXXXXXGX 1013
PP K P P PP P G P PP PP G
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGV--PPVPPPSEAPPVPKPSVGV 1207
Query: 1014 PPXXPPPGGXGXXXXTGGGXXPPP 1085
PP PPP G P P
Sbjct: 1208 PPV-PPPSTAPPVPTPSAGLPPVP 1230
Score = 28.7 bits (61), Expect = 1.8
Identities = 40/181 (22%), Positives = 40/181 (22%), Gaps = 13/181 (7%)
Frame = +1
Query: 688 GGXXRPPPXGGXKXXXSPXKPPPGXPXPPPXXGXGXFSXXXXXXXX--KXKKXPPPXXGX 861
G PPP P G P P G K PP
Sbjct: 1058 GAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAP 1117
Query: 862 XXXEXXXKXKXGXGPXKXPPXAPPPRXXRXXGXKNXXXPPPPPPXKXXXXXPXXXXPXGG 1041
K P P APP PP K P P G
Sbjct: 1118 SGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSG 1177
Query: 1042 XGXXPKXXGXGPP-------PPXGGXGXGXPP----PXXPPXXKKXXGXXXXPXXPPPXK 1188
PK PP PP G PP PP G P P P
Sbjct: 1178 IPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAG---LPPVPVPTA 1234
Query: 1189 K 1191
K
Sbjct: 1235 K 1235
Score = 28.3 bits (60), Expect = 2.3
Identities = 28/128 (21%), Positives = 29/128 (22%)
Frame = +2
Query: 737 PXXNPPRGXPXPXPGXXXDXFPPPPPPPXXKXKKXPPPXGGGXPGXXXKXQSXGXAXKXP 916
P P P P PPP P P + P P G S P
Sbjct: 1042 PVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG----APPVPAPSGIPPVPKP 1097
Query: 917 PXXPPPPXGPXXXGKKTXXXPPPPPXXXXKXXPPXXXXPXGXGXXXXNXXGXXPPPPGGX 1096
PP P PP P P G PP P
Sbjct: 1098 SVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSG-APPVPKPSVAAPPVPAPS 1156
Query: 1097 GGRXXPPP 1120
G P P
Sbjct: 1157 GAPPVPKP 1164
Score = 28.3 bits (60), Expect = 2.3
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 3/50 (6%)
Frame = +3
Query: 891 AGGGPXKXPPXXPPPPXXPXXGXKKPXXXPP---PPPXXXXXGXPPXXPP 1031
A G P PP PP P G P PP PP G PP P
Sbjct: 1185 AAGVPPVPPPSEAPPVPKPSVGV--PPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 26.6 bits (56), Expect = 7.1
Identities = 19/92 (20%), Positives = 20/92 (21%)
Frame = +3
Query: 843 PPXXGXGXXGXXXKXKAGGGPXKXPPXXPPPPXXPXXGXKKPXXXPPPPPXXXXXGXPPX 1022
PP +G P P PP P P PP P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Query: 1023 XPPPGGXGXXXXTGGGXXPPPXGGXGXGXTPP 1118
P P P P G PP
Sbjct: 1181 VPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 32.3 bits (70), Expect = 0.14
Identities = 28/127 (22%), Positives = 32/127 (25%)
Frame = +2
Query: 737 PXXNPPRGXPXPXPGXXXDXFPPPPPPPXXKXKKXPPPXGGGXPGXXXKXQSXGXAXKXP 916
P PP P D PPPPPP PPP + + +
Sbjct: 169 PSFQPPSAAA-PATSLPSDYNPPPPPP--------PPPAVEDQAADANEPDDYYSSGRAV 219
Query: 917 PXXPPPPXGPXXXGKKTXXXPPPPPXXXXKXXPPXXXXPXGXGXXXXNXXGXXPPPPGGX 1096
PP P PPPPP + PPPP
Sbjct: 220 SPEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATP 279
Query: 1097 GGRXXPP 1117
PP
Sbjct: 280 SQPPRPP 286
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.5 bits (68), Expect = 0.25
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 4/48 (8%)
Frame = +3
Query: 903 PXKXPPXXP----PPPXXPXXGXKKPXXXPPPPPXXXXXGXPPXXPPP 1034
P PP P PP P PPPP PP PPP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 29.9 bits (64), Expect = 0.76
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +3
Query: 903 PXKXPPXXPPPPXXPXXGXKKPXXXPPPPPXXXXXGXPPXXPPPG 1037
P P PPPP P P PPP P P P PG
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLP----ASSAPSVPNPG 1747
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.5 bits (68), Expect = 0.25
Identities = 32/99 (32%), Positives = 32/99 (32%), Gaps = 1/99 (1%)
Frame = -2
Query: 990 GGGGGXXXVFXPXXXGPXGGGGXXGGFXXAXPXLXFXXXFPGXPPPXGGGXFFXFXXGGG 811
G GG F GP G G GGF F G GG F GG
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGF----------GGFGGEGHHHGGHGGFGGGPGGF 233
Query: 810 GGGGKXSXXXPGXGXGXPRGGFXXGXXXF-XSPXXGGXP 697
GG PG G G GGF G F P G P
Sbjct: 234 EGGPGGFGGGPG-GFGGGLGGFGGGPGGFGGGPGGHGGP 271
Score = 30.7 bits (66), Expect = 0.43
Identities = 23/73 (31%), Positives = 23/73 (31%)
Frame = -3
Query: 1181 GGGXXGXXXXPXXFXXXGGXXGGGXPXPXPPXGGGGPXPXXXGXXPXPPXGXXXXGXXXX 1002
GGG G P F GG G G GGGP G P G
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGP-----GGFEGGPGGFGGGPGGFG 248
Query: 1001 XXXGGGGGGXXXF 963
GG GGG F
Sbjct: 249 GGLGGFGGGPGGF 261
Score = 30.7 bits (66), Expect = 0.43
Identities = 30/85 (35%), Positives = 30/85 (35%)
Frame = -2
Query: 867 GXPPPXGGGXFFXFXXGGGGGGGKXSXXXPGXGXGXPRGGFXXGXXXFXSPXXGGXPXPP 688
G PPP G G F F GG GG G G G G GGF G F GG P
Sbjct: 198 GGPPP-GPGGFGGF--GGFGGEGHHHGGHGGFGGGP--GGFEGGPGGF-----GGGPGGF 247
Query: 687 XXXXXXXPPGAXXPGGTPXXGGXXG 613
G GG P G G
Sbjct: 248 GGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 29.1 bits (62), Expect = 1.3
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -1
Query: 1030 GGXXGGXPLXXXXGGGGGXXXGFFXPXXGXXGGGGXXGGXFXGP 899
GG GG P GG G G G G GG GG GP
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGP 237
Score = 27.9 bits (59), Expect = 3.1
Identities = 25/82 (30%), Positives = 25/82 (30%), Gaps = 1/82 (1%)
Frame = -1
Query: 1141 FXPXXGXXGGVXPXPXPPXG-GGXXPPPVXXXXPXPPGGGXXGGXPLXXXXGGGGGXXXG 965
F G GG P P G GG GGG G GGG G G
Sbjct: 190 FGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGG 249
Query: 964 FFXPXXGXXGGGGXXGGXFXGP 899
G GG G G GP
Sbjct: 250 GLGGFGGGPGGFGGGPGGHGGP 271
Score = 27.1 bits (57), Expect = 5.3
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = -2
Query: 945 GPXGGGGXXGGFXXAXPXLXFXXXFPGXPPPXGGGXFFXFXXGGGGGGGKXSXXXPG 775
G G GG GGF F G P GGG GG GGG PG
Sbjct: 222 GHGGFGGGPGGFEGGP------GGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
>SPAC26A3.08 |smb1|smb|Sm snRNP core protein Smb1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 147
Score = 29.9 bits (64), Expect = 0.76
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +1
Query: 1015 PXXXXPXGGXGXXPKXXGXGPPPPXGGXGXGXPPPXXPP 1131
P P G G + G PPP G G G PPP P
Sbjct: 109 PLGQAPVGLAGPV-RGVGYTAPPPPAGFGRGAPPPGFRP 146
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.7 bits (61), Expect = 1.8
Identities = 20/78 (25%), Positives = 22/78 (28%)
Frame = +2
Query: 704 PPXXGXKKXXFPXXNPPRGXPXPXPGXXXDXFPPPPPPPXXKXKKXPPPXGGGXPGXXXK 883
PP + P +P P P PPP P K PP P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS--PPSAPSLP----- 191
Query: 884 XQSXGXAXKXPPXXPPPP 937
PP PPPP
Sbjct: 192 ----SAVPPMPPKVPPPP 205
Score = 26.6 bits (56), Expect = 7.1
Identities = 20/80 (25%), Positives = 22/80 (27%)
Frame = +2
Query: 752 PRGXPXPXPGXXXDXFPPPPPPPXXKXKKXPPPXGGGXPGXXXKXQSXGXAXKXPPXXPP 931
P P P P + PP PP PPP P K + P
Sbjct: 124 PPSAPAP-PTPQSELRPPTSAPPRPSI---PPPSPASAPPIPSKAPPIPSSLPPPAQPAA 179
Query: 932 PPXGPXXXGKKTXXXPPPPP 991
P P PP PP
Sbjct: 180 PVKSPPSAPSLPSAVPPMPP 199
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.5 bits (58), Expect = 4.0
Identities = 32/130 (24%), Positives = 36/130 (27%), Gaps = 1/130 (0%)
Frame = +2
Query: 734 FPXXNPP-RGXPXPXPGXXXDXFPPPPPPPXXKXKKXPPPXGGGXPGXXXKXQSXGXAXK 910
FP + P P P PPPP + PPP PG +
Sbjct: 197 FPAHHEPGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPG---EHMPPPPMHH 253
Query: 911 XPPXXPPPPXGPXXXGKKTXXXPPPPPXXXXKXXPPXXXXPXGXGXXXXNXXGXXPPPPG 1090
P PPP G+ PPPP P G PPP
Sbjct: 254 EPGEHMPPPPMHHEPGE---HMPPPPMHHEPGEHMPPPPMHHEPGEH------MPPPPMH 304
Query: 1091 GXGGRXXPPP 1120
G PPP
Sbjct: 305 HEPGEHMPPP 314
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 26.6 bits (56), Expect = 7.1
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -2
Query: 855 PXGGGXFFXFXXGGGGGGGKXSXXXPGXGXGXPRGGFXXG 736
P G G F G GG G G G RGGF G
Sbjct: 134 PAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGG 173
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.2 bits (55), Expect = 9.3
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +3
Query: 927 PPPPXXPXXGXKKPXXXPPPPPXXXXXGXPP 1019
PPPP P PPPP PP
Sbjct: 908 PPPPPTASMTASAPAIASPPPPKVGETYHPP 938
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.2 bits (55), Expect = 9.3
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 797 FPPPPPPP 820
FPPPPPPP
Sbjct: 944 FPPPPPPP 951
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.154 0.536
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,104,348
Number of Sequences: 5004
Number of extensions: 62395
Number of successful extensions: 525
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 276
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 669373152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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