Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_O14
(1150 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0363 + 19904002-19905792 38 0.020
12_01_0368 + 2815424-2815658,2816898-2817120,2818329-2818680,281... 35 0.11
11_01_0345 + 2579602-2579836,2581262-2581484,2582822-2583173,258... 35 0.14
03_05_0530 - 25306788-25306919,25307446-25308037,25308152-253089... 33 0.32
04_04_0676 - 27187778-27188316,27188441-27188530,27189249-271894... 32 0.98
12_02_1169 - 26655170-26655332,26655429-26655504,26655603-266557... 29 5.2
05_03_0528 - 15032204-15032932 29 6.9
12_02_1280 - 27517683-27517871,27517955-27518029,27518155-275183... 29 9.1
10_08_0135 - 15118082-15118300,15118388-15118546,15118783-151188... 29 9.1
01_01_0771 - 5982826-5983327,5983424-5984772 29 9.1
>06_03_0363 + 19904002-19905792
Length = 596
Score = 37.5 bits (83), Expect = 0.020
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +1
Query: 151 YKGXNXVXEVTEEIXNPGVNVPLSISIAVPLITVLYVFXXVAYMTVLSYAEM 306
Y G + V + EE NPG +VPL + ++ ITV+Y +A + + Y E+
Sbjct: 281 YTGFDMVATMAEETKNPGRDVPLGLISSMSSITVVYCLMSLALVGMQRYTEI 332
>12_01_0368 +
2815424-2815658,2816898-2817120,2818329-2818680,
2819354-2819620
Length = 358
Score = 35.1 bits (77), Expect = 0.11
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 151 YKGXNXVXEVTEEIXNPGVNVPLSISIAVPLITVLYVFXXVAYMTVLSY 297
Y G + V + EE+ P ++P+ +S +V L+T+LY + +L Y
Sbjct: 220 YIGYDAVSTMAEEVERPSRDIPIGVSGSVVLVTLLYCLMAASMSMLLPY 268
>11_01_0345 +
2579602-2579836,2581262-2581484,2582822-2583173,
2583894-2584125,2584683-2585266
Length = 541
Score = 34.7 bits (76), Expect = 0.14
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 151 YKGXNXVXEVTEEIXNPGVNVPLSISIAVPLITVLYVFXXVAYMTVLSY 297
Y G + V + EE+ P ++P+ +S +V L+T+LY + +L Y
Sbjct: 220 YIGYDAVSTMAEEVERPSRDIPVGVSGSVVLVTLLYCLMAASMSMLLPY 268
>03_05_0530 -
25306788-25306919,25307446-25308037,25308152-25308975,
25309533-25309592,25310115-25310180,25310318-25310461,
25310616-25310756,25310898-25311056,25311818-25311884,
25311986-25312158,25312237-25312333,25312410-25312528,
25312867-25312951,25313120-25313321,25314456-25314633
Length = 1012
Score = 33.5 bits (73), Expect = 0.32
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 151 YKGXNXVXEVTEEIXNPGVNVPLSISIAVPLITVLYVFXXVAYMTVLSYAEM 306
Y G + V EE+ NP ++PL I A+ + LY+ V + ++ Y M
Sbjct: 215 YIGFDTVASTAEEVKNPQRDLPLGIGAALSICCCLYMMVSVVIVGLVPYFAM 266
>04_04_0676 -
27187778-27188316,27188441-27188530,27189249-27189480,
27189569-27189899,27190369-27190591,27190772-27191132
Length = 591
Score = 31.9 bits (69), Expect = 0.98
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +1
Query: 151 YKGXNXVXEVTEEIXNPGVNVPLSISIAVPLITVLYVFXXVAYMTVLSYAEM 306
Y G + + EEI +P +P+ I+ +V +++ LY +A +L Y E+
Sbjct: 255 YIGYDSASTMAEEIRDPARALPVGIAGSVLVVSALYCLMSLALCAMLPYTEI 306
>12_02_1169 -
26655170-26655332,26655429-26655504,26655603-26655715,
26655808-26655913,26656001-26656235,26656415-26656573,
26657279-26657377,26657472-26657568,26657650-26657768,
26657860-26658000,26658100-26658184,26658287-26658488,
26659274-26659379
Length = 566
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 151 YKGXNXVXEVTEEIXNPGVNVPLSISIAVPLITVLYVFXXV 273
Y G + V EE+ NP ++PL I A+ + LY+ V
Sbjct: 238 YIGFDSVASTAEEVKNPQRDLPLGIGTALSVCCSLYMLVSV 278
>05_03_0528 - 15032204-15032932
Length = 242
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 277 YMTVLSYAEMTSGHCGGGGVRRKSTRA 357
+ VL SG CGGGG RK T A
Sbjct: 190 FCRVLERGPRPSGRCGGGGAGRKRTAA 216
>12_02_1280 -
27517683-27517871,27517955-27518029,27518155-27518318,
27518424-27518538,27518783-27519074,27519162-27519318,
27519438-27519510,27520309-27520377,27520471-27520694,
27520800-27520981,27521067-27522064,27522335-27522580
Length = 927
Score = 28.7 bits (61), Expect = 9.1
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1
Query: 379 DRHDXTKRPEYSCAEXHRHRS 317
DRH + R +YS ++ H+HRS
Sbjct: 370 DRHKDSTRSKYSTSDSHKHRS 390
>10_08_0135 -
15118082-15118300,15118388-15118546,15118783-15118849,
15118969-15119141,15119602-15119698,15119782-15119900,
15120000-15120140,15120214-15120298,15120411-15120612,
15120906-15120970,15121365-15121654
Length = 538
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = +1
Query: 151 YKGXNXVXEVTEEIXNPGVNVPLSISIAVPLITVLYVFXXVAYMTVLSY 297
Y G + V EE+ NP ++P + + + L LY+ + + ++ Y
Sbjct: 321 YIGFDAVASTAEEVKNPQRDLPWGMCLTLSLCCFLYMMVSIVIVGLVPY 369
>01_01_0771 - 5982826-5983327,5983424-5984772
Length = 616
Score = 28.7 bits (61), Expect = 9.1
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 151 YKGXNXVXEVTEEIXNPGVNVPLSISIAVPLITVLY 258
Y G + + + EE NP ++PL + ++ +IT +Y
Sbjct: 285 YGGFDNIATMAEETKNPSRDIPLGLLGSMSVITAIY 320
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,572,373
Number of Sequences: 37544
Number of extensions: 268339
Number of successful extensions: 774
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3491481604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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