Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_O10
(1145 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457211-1|CAG33492.1| 615|Homo sapiens LMO6 protein. 76 3e-13
BT007423-1|AAP36091.1| 615|Homo sapiens LIM domain only 6 protein. 76 3e-13
BC016856-1|AAH16856.1| 615|Homo sapiens LIM domain only 6 protein. 76 3e-13
BC002468-1|AAH02468.1| 615|Homo sapiens LIM domain only 6 protein. 76 3e-13
AJ011654-1|CAA09726.1| 615|Homo sapiens triple LIM domain prote... 76 3e-13
BC001451-1|AAH01451.1| 421|Homo sapiens testis derived transcri... 48 8e-05
AK021575-1|BAB13846.1| 421|Homo sapiens protein ( Homo sapiens ... 48 8e-05
AJ250865-1|CAB65119.1| 421|Homo sapiens TESS 2 protein. 48 8e-05
AF260225-2|AAG17636.1| 412|Homo sapiens TESTIN 3 protein. 48 8e-05
AF260225-1|AAG17635.1| 421|Homo sapiens TESTIN 2 protein. 48 8e-05
AF245357-1|AAG17613.1| 412|Homo sapiens TESTIN 3 protein. 48 8e-05
AF245356-1|AAG17612.1| 421|Homo sapiens TESTIN 2 protein. 48 8e-05
AC073130-1|AAQ93367.1| 421|Homo sapiens unknown protein. 48 8e-05
BC114940-1|AAI14941.1| 831|Homo sapiens prickle homolog 1 (Dros... 46 3e-04
BC114939-1|AAI14940.1| 831|Homo sapiens prickle homolog 1 (Dros... 46 3e-04
AK056499-1|BAB71198.1| 831|Homo sapiens protein ( Homo sapiens ... 46 3e-04
AF399844-1|AAQ03035.1| 831|Homo sapiens REST/NRSF-interacting l... 46 3e-04
BC110459-1|AAI10460.1| 345|Homo sapiens C6orf49 protein protein. 44 8e-04
AL365205-9|CAM16153.1| 344|Homo sapiens chromosome 6 open readi... 44 8e-04
AL365205-8|CAO72057.1| 312|Homo sapiens chromosome 6 open readi... 44 8e-04
AL365205-7|CAI13185.1| 384|Homo sapiens chromosome 6 open readi... 44 8e-04
BC000646-1|AAH00646.1| 365|Homo sapiens LIM and cysteine-rich d... 44 0.001
AK022176-1|BAB13976.1| 365|Homo sapiens protein ( Homo sapiens ... 44 0.001
AF216709-1|AAG36778.1| 365|Homo sapiens dyxin protein. 44 0.001
AF169284-1|AAF34411.1| 365|Homo sapiens LIM and cysteine-rich d... 44 0.001
AK222840-1|BAD96560.1| 421|Homo sapiens testin isoform 1 varian... 42 0.003
U93305-2|AAB92357.1| 407|Homo sapiens triple LIM domain protein... 41 0.010
BC119002-1|AAI19003.1| 844|Homo sapiens prickle homolog 2 (Dros... 40 0.013
X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein. 33 2.0
Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)... 33 2.6
U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain pro... 33 2.6
AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 2.6
AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 2.6
AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 2.6
AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 2.6
AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 2.6
AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 2.6
>CR457211-1|CAG33492.1| 615|Homo sapiens LMO6 protein.
Length = 615
Score = 75.8 bits (178), Expect = 3e-13
Identities = 62/240 (25%), Positives = 90/240 (37%), Gaps = 15/240 (6%)
Frame = +3
Query: 372 KEVSEGRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKHSVYHEELGSVRDRLGLRDSRVN 551
++ G+PC++C E CPGF+ H WRK C+ C C R +H+V+ + R L
Sbjct: 19 EDPDRGQPCNSCREQCPGFLLHGWRKICQHCKCPREEHAVHAVPVDLERIMCRLISDFQR 78
Query: 552 HHSYDS------------PPGLTAKQTELYWQSLAERTPTSXXXXXXXXXXXXXXXXXXX 695
H D PPGL +Q ++ L E
Sbjct: 79 HSISDDDSGCASEEYAWVPPGLKPEQVYQFFSCLPE-----DKVPYVNSPGEKYRIKQLL 133
Query: 696 SQLPKQDLTLDHCKHIDEGHRKQYEDFVAARNEIALDIGIASQHHG--SPLECIGCNKSI 869
QLP D +C ++E +K+ F R L GI + C C K I
Sbjct: 134 HQLPPHDSEAQYCTALEEEEKKELRAFSQQRKRENLGRGIVRIFPVTITGAICEECGKQI 193
Query: 870 RSGSITILAPXIGEDAFSTRXAFL-LGMR*IASRTXLLQLNGRLYXVRHYSEXLXPRCHA 1046
G I + A G A F+ + + G++Y RH++E L PRC A
Sbjct: 194 GGGDIAVFASRAGLGACWHPQCFVCTTCQELLVDLIYFYHVGKVYCGRHHAECLRPRCQA 253
>BT007423-1|AAP36091.1| 615|Homo sapiens LIM domain only 6 protein.
Length = 615
Score = 75.8 bits (178), Expect = 3e-13
Identities = 62/240 (25%), Positives = 90/240 (37%), Gaps = 15/240 (6%)
Frame = +3
Query: 372 KEVSEGRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKHSVYHEELGSVRDRLGLRDSRVN 551
++ G+PC++C E CPGF+ H WRK C+ C C R +H+V+ + R L
Sbjct: 19 EDPDRGQPCNSCREQCPGFLLHGWRKICQHCKCPREEHAVHAVPVDLERIMCRLISDFQR 78
Query: 552 HHSYDS------------PPGLTAKQTELYWQSLAERTPTSXXXXXXXXXXXXXXXXXXX 695
H D PPGL +Q ++ L E
Sbjct: 79 HSISDDDSGCASEEYAWVPPGLKPEQVYQFFSCLPE-----DKVPYVNSPGEKYRIKQLL 133
Query: 696 SQLPKQDLTLDHCKHIDEGHRKQYEDFVAARNEIALDIGIASQHHG--SPLECIGCNKSI 869
QLP D +C ++E +K+ F R L GI + C C K I
Sbjct: 134 HQLPPHDSEAQYCTALEEEEKKELRAFSQQRKRENLGRGIVRIFPVTITGAICEECGKQI 193
Query: 870 RSGSITILAPXIGEDAFSTRXAFL-LGMR*IASRTXLLQLNGRLYXVRHYSEXLXPRCHA 1046
G I + A G A F+ + + G++Y RH++E L PRC A
Sbjct: 194 GGGDIAVFASRAGLGACWHPQCFVCTTCQELLVDLIYFYHVGKVYCGRHHAECLRPRCQA 253
>BC016856-1|AAH16856.1| 615|Homo sapiens LIM domain only 6 protein.
Length = 615
Score = 75.8 bits (178), Expect = 3e-13
Identities = 62/240 (25%), Positives = 90/240 (37%), Gaps = 15/240 (6%)
Frame = +3
Query: 372 KEVSEGRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKHSVYHEELGSVRDRLGLRDSRVN 551
++ G+PC++C E CPGF+ H WRK C+ C C R +H+V+ + R L
Sbjct: 19 EDPDRGQPCNSCREQCPGFLLHGWRKICQHCKCPREEHAVHAVPVDLERIMCRLISDFQR 78
Query: 552 HHSYDS------------PPGLTAKQTELYWQSLAERTPTSXXXXXXXXXXXXXXXXXXX 695
H D PPGL +Q ++ L E
Sbjct: 79 HSISDDDSGCASEEYAWVPPGLKPEQVYQFFSCLPE-----DKVPYVNSPGEKYRIKQLL 133
Query: 696 SQLPKQDLTLDHCKHIDEGHRKQYEDFVAARNEIALDIGIASQHHG--SPLECIGCNKSI 869
QLP D +C ++E +K+ F R L GI + C C K I
Sbjct: 134 HQLPPHDSEAQYCTALEEEEKKELRAFSQQRKRENLGRGIVRIFPVTITGAICEECGKQI 193
Query: 870 RSGSITILAPXIGEDAFSTRXAFL-LGMR*IASRTXLLQLNGRLYXVRHYSEXLXPRCHA 1046
G I + A G A F+ + + G++Y RH++E L PRC A
Sbjct: 194 GGGDIAVFASRAGLGACWHPQCFVCTTCQELLVDLIYFYHVGKVYCGRHHAECLRPRCQA 253
>BC002468-1|AAH02468.1| 615|Homo sapiens LIM domain only 6 protein.
Length = 615
Score = 75.8 bits (178), Expect = 3e-13
Identities = 62/240 (25%), Positives = 90/240 (37%), Gaps = 15/240 (6%)
Frame = +3
Query: 372 KEVSEGRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKHSVYHEELGSVRDRLGLRDSRVN 551
++ G+PC++C E CPGF+ H WRK C+ C C R +H+V+ + R L
Sbjct: 19 EDPDRGQPCNSCREQCPGFLLHGWRKICQHCKCPREEHAVHAVPVDLERIMCRLISDFQR 78
Query: 552 HHSYDS------------PPGLTAKQTELYWQSLAERTPTSXXXXXXXXXXXXXXXXXXX 695
H D PPGL +Q ++ L E
Sbjct: 79 HSISDDDSGCASEEYAWVPPGLKPEQVYQFFSCLPE-----DKVPYVNSPGEKYRIKQLL 133
Query: 696 SQLPKQDLTLDHCKHIDEGHRKQYEDFVAARNEIALDIGIASQHHG--SPLECIGCNKSI 869
QLP D +C ++E +K+ F R L GI + C C K I
Sbjct: 134 HQLPPHDSEAQYCTALEEEEKKELRAFSQQRKRENLGRGIVRIFPVTITGAICEECGKQI 193
Query: 870 RSGSITILAPXIGEDAFSTRXAFL-LGMR*IASRTXLLQLNGRLYXVRHYSEXLXPRCHA 1046
G I + A G A F+ + + G++Y RH++E L PRC A
Sbjct: 194 GGGDIAVFASRAGLGACWHPQCFVCTTCQELLVDLIYFYHVGKVYCGRHHAECLRPRCQA 253
>AJ011654-1|CAA09726.1| 615|Homo sapiens triple LIM domain protein
protein.
Length = 615
Score = 75.8 bits (178), Expect = 3e-13
Identities = 62/240 (25%), Positives = 90/240 (37%), Gaps = 15/240 (6%)
Frame = +3
Query: 372 KEVSEGRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKHSVYHEELGSVRDRLGLRDSRVN 551
++ G+PC++C E CPGF+ H WRK C+ C C R +H+V+ + R L
Sbjct: 19 EDPDRGQPCNSCREQCPGFLLHGWRKICQHCKCPREEHAVHAVPVDLERIMCRLISDFQR 78
Query: 552 HHSYDS------------PPGLTAKQTELYWQSLAERTPTSXXXXXXXXXXXXXXXXXXX 695
H D PPGL +Q ++ L E
Sbjct: 79 HSISDDDSGCASEEYAWVPPGLKPEQVYQFFSCLPE-----DKVPYVNSPGEKYRIKQLL 133
Query: 696 SQLPKQDLTLDHCKHIDEGHRKQYEDFVAARNEIALDIGIASQHHG--SPLECIGCNKSI 869
QLP D +C ++E +K+ F R L GI + C C K I
Sbjct: 134 HQLPPHDSEAQYCTALEEEEKKELRAFSQQRKRENLGRGIVRIFPVTITGAICEECGKQI 193
Query: 870 RSGSITILAPXIGEDAFSTRXAFL-LGMR*IASRTXLLQLNGRLYXVRHYSEXLXPRCHA 1046
G I + A G A F+ + + G++Y RH++E L PRC A
Sbjct: 194 GGGDIAVFASRAGLGACWHPQCFVCTTCQELLVDLIYFYHVGKVYCGRHHAECLRPRCQA 253
>BC001451-1|AAH01451.1| 421|Homo sapiens testis derived transcript
(3 LIM domains) protein.
Length = 421
Score = 47.6 bits (108), Expect = 8e-05
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +3
Query: 387 GRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKHSV 491
G PC C E C GF H WRK C++C C + +H V
Sbjct: 19 GAPCLKCKEKCEGFELHFWRKICRNCKCGQEEHDV 53
>AK021575-1|BAB13846.1| 421|Homo sapiens protein ( Homo sapiens
cDNA FLJ11513 fis, clone HEMBA1002215, highly similar to
TESTIN 2 (TES2) [CONTAINS: TESTIN 1 (TES1)]. ).
Length = 421
Score = 47.6 bits (108), Expect = 8e-05
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +3
Query: 387 GRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKHSV 491
G PC C E C GF H WRK C++C C + +H V
Sbjct: 19 GAPCLKCKEKCEGFELHFWRKICRNCKCGQEEHDV 53
>AJ250865-1|CAB65119.1| 421|Homo sapiens TESS 2 protein.
Length = 421
Score = 47.6 bits (108), Expect = 8e-05
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +3
Query: 387 GRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKHSV 491
G PC C E C GF H WRK C++C C + +H V
Sbjct: 19 GAPCLKCKEKCEGFELHFWRKICRNCKCGQEEHDV 53
>AF260225-2|AAG17636.1| 412|Homo sapiens TESTIN 3 protein.
Length = 412
Score = 47.6 bits (108), Expect = 8e-05
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +3
Query: 387 GRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKHSV 491
G PC C E C GF H WRK C++C C + +H V
Sbjct: 10 GAPCLKCKEKCEGFELHFWRKICRNCKCGQEEHDV 44
>AF260225-1|AAG17635.1| 421|Homo sapiens TESTIN 2 protein.
Length = 421
Score = 47.6 bits (108), Expect = 8e-05
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +3
Query: 387 GRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKHSV 491
G PC C E C GF H WRK C++C C + +H V
Sbjct: 19 GAPCLKCKEKCEGFELHFWRKICRNCKCGQEEHDV 53
>AF245357-1|AAG17613.1| 412|Homo sapiens TESTIN 3 protein.
Length = 412
Score = 47.6 bits (108), Expect = 8e-05
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +3
Query: 387 GRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKHSV 491
G PC C E C GF H WRK C++C C + +H V
Sbjct: 10 GAPCLKCKEKCEGFELHFWRKICRNCKCGQEEHDV 44
>AF245356-1|AAG17612.1| 421|Homo sapiens TESTIN 2 protein.
Length = 421
Score = 47.6 bits (108), Expect = 8e-05
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +3
Query: 387 GRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKHSV 491
G PC C E C GF H WRK C++C C + +H V
Sbjct: 19 GAPCLKCKEKCEGFELHFWRKICRNCKCGQEEHDV 53
>AC073130-1|AAQ93367.1| 421|Homo sapiens unknown protein.
Length = 421
Score = 47.6 bits (108), Expect = 8e-05
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +3
Query: 387 GRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKHSV 491
G PC C E C GF H WRK C++C C + +H V
Sbjct: 19 GAPCLKCKEKCEGFELHFWRKICRNCKCGQEEHDV 53
>BC114940-1|AAI14941.1| 831|Homo sapiens prickle homolog 1
(Drosophila) protein.
Length = 831
Score = 45.6 bits (103), Expect = 3e-04
Identities = 38/162 (23%), Positives = 61/162 (37%), Gaps = 3/162 (1%)
Frame = +3
Query: 570 PPGLTAKQTELYWQSLAERTPTSXXXXXXXXXXXXXXXXXXXSQLPKQDLTLDHCKHIDE 749
PPGL +Q +LY+ L E QLP D + +C+ + E
Sbjct: 37 PPGLRPEQIQLYFACLPEEK-----VPYVNSPGEKHRIKQLLYQLPPHDNEVRYCQSLSE 91
Query: 750 GHRKQYEDFVAARNEIALDIGIASQHHGSPLE--CIGCNKSIRSGSITILAPXIGEDAFS 923
+K+ + F A R + AL G + + C C I G + + A G
Sbjct: 92 EEKKELQVFSAQRKKEALGRGTIKLLSRAVMHAVCEQCGLKINGGEVAVFASRAGPGVCW 151
Query: 924 TRXAFL-LGMR*IASRTXLLQLNGRLYXVRHYSEXLXPRCHA 1046
F+ + +G+++ RH++E L PRC A
Sbjct: 152 HPSCFVCFTCNELLVDLIYFYQDGKIHCGRHHAELLKPRCSA 193
>BC114939-1|AAI14940.1| 831|Homo sapiens prickle homolog 1
(Drosophila) protein.
Length = 831
Score = 45.6 bits (103), Expect = 3e-04
Identities = 38/162 (23%), Positives = 61/162 (37%), Gaps = 3/162 (1%)
Frame = +3
Query: 570 PPGLTAKQTELYWQSLAERTPTSXXXXXXXXXXXXXXXXXXXSQLPKQDLTLDHCKHIDE 749
PPGL +Q +LY+ L E QLP D + +C+ + E
Sbjct: 37 PPGLRPEQIQLYFACLPEEK-----VPYVNSPGEKHRIKQLLYQLPPHDNEVRYCQSLSE 91
Query: 750 GHRKQYEDFVAARNEIALDIGIASQHHGSPLE--CIGCNKSIRSGSITILAPXIGEDAFS 923
+K+ + F A R + AL G + + C C I G + + A G
Sbjct: 92 EEKKELQVFSAQRKKEALGRGTIKLLSRAVMHAVCEQCGLKINGGEVAVFASRAGPGVCW 151
Query: 924 TRXAFL-LGMR*IASRTXLLQLNGRLYXVRHYSEXLXPRCHA 1046
F+ + +G+++ RH++E L PRC A
Sbjct: 152 HPSCFVCFTCNELLVDLIYFYQDGKIHCGRHHAELLKPRCSA 193
>AK056499-1|BAB71198.1| 831|Homo sapiens protein ( Homo sapiens cDNA
FLJ31937 fis, clone NT2RP7006527, moderately similar to
LIM-ONLY PROTEIN 6. ).
Length = 831
Score = 45.6 bits (103), Expect = 3e-04
Identities = 38/162 (23%), Positives = 61/162 (37%), Gaps = 3/162 (1%)
Frame = +3
Query: 570 PPGLTAKQTELYWQSLAERTPTSXXXXXXXXXXXXXXXXXXXSQLPKQDLTLDHCKHIDE 749
PPGL +Q +LY+ L E QLP D + +C+ + E
Sbjct: 37 PPGLRPEQIQLYFACLPEEK-----VPYVNSPGEKHRIKQLLYQLPPHDNEVRYCQSLSE 91
Query: 750 GHRKQYEDFVAARNEIALDIGIASQHHGSPLE--CIGCNKSIRSGSITILAPXIGEDAFS 923
+K+ + F A R + AL G + + C C I G + + A G
Sbjct: 92 EEKKELQVFSAQRKKEALGRGTIKLLSRAVMHAVCEQCGLKINGGEVAVFASRAGPGVCW 151
Query: 924 TRXAFL-LGMR*IASRTXLLQLNGRLYXVRHYSEXLXPRCHA 1046
F+ + +G+++ RH++E L PRC A
Sbjct: 152 HPSCFVCFTCNELLVDLIYFYQDGKIHCGRHHAELLKPRCSA 193
>AF399844-1|AAQ03035.1| 831|Homo sapiens REST/NRSF-interacting lim
domain protein protein.
Length = 831
Score = 45.6 bits (103), Expect = 3e-04
Identities = 38/162 (23%), Positives = 61/162 (37%), Gaps = 3/162 (1%)
Frame = +3
Query: 570 PPGLTAKQTELYWQSLAERTPTSXXXXXXXXXXXXXXXXXXXSQLPKQDLTLDHCKHIDE 749
PPGL +Q +LY+ L E QLP D + +C+ + E
Sbjct: 37 PPGLRPEQIQLYFACLPEEK-----VPYVNSPGEKHRIKQLLYQLPPHDNEVRYCQSLSE 91
Query: 750 GHRKQYEDFVAARNEIALDIGIASQHHGSPLE--CIGCNKSIRSGSITILAPXIGEDAFS 923
+K+ + F A R + AL G + + C C I G + + A G
Sbjct: 92 EEKKELQVFSAQRKKEALGRGTIKLLSRAVMHAVCEQCGLKINGGEVAVFASRAGPGVCW 151
Query: 924 TRXAFL-LGMR*IASRTXLLQLNGRLYXVRHYSEXLXPRCHA 1046
F+ + +G+++ RH++E L PRC A
Sbjct: 152 HPSCFVCFTCNELLVDLIYFYQDGKIHCGRHHAELLKPRCSA 193
>BC110459-1|AAI10460.1| 345|Homo sapiens C6orf49 protein protein.
Length = 345
Score = 44.4 bits (100), Expect = 8e-04
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 4/124 (3%)
Frame = +3
Query: 699 QLPKQDLTLDHCKHIDEGHRKQYEDFVAARNEIALDIGIASQHHGSPLE---CIGCNKSI 869
QLP QD+ +C + E R + + F A R + AL G+A + LE C C + +
Sbjct: 33 QLPPQDIDERYCLALGEEERAELQLFCARRKQEALGQGVA-RLVLPKLEGHTCEKCRELL 91
Query: 870 RSGSITILAPXIGEDAFSTRXAFLLGMR*IASRTXL-LQLNGRLYXVRHYSEXLXPRCHA 1046
+ G + A GE + F A + +G+LY RH++E L PRC A
Sbjct: 92 KPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPA 151
Query: 1047 AMSL 1058
L
Sbjct: 152 CDQL 155
>AL365205-9|CAM16153.1| 344|Homo sapiens chromosome 6 open reading
frame 49 protein.
Length = 344
Score = 44.4 bits (100), Expect = 8e-04
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 4/124 (3%)
Frame = +3
Query: 699 QLPKQDLTLDHCKHIDEGHRKQYEDFVAARNEIALDIGIASQHHGSPLE---CIGCNKSI 869
QLP QD+ +C + E R + + F A R + AL G+A + LE C C + +
Sbjct: 33 QLPPQDIDERYCLALGEEERAELQLFCARRKQEALGQGVA-RLVLPKLEGHTCEKCRELL 91
Query: 870 RSGSITILAPXIGEDAFSTRXAFLLGMR*IASRTXL-LQLNGRLYXVRHYSEXLXPRCHA 1046
+ G + A GE + F A + +G+LY RH++E L PRC A
Sbjct: 92 KPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPA 151
Query: 1047 AMSL 1058
L
Sbjct: 152 CDQL 155
>AL365205-8|CAO72057.1| 312|Homo sapiens chromosome 6 open reading
frame 49 protein.
Length = 312
Score = 44.4 bits (100), Expect = 8e-04
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 4/124 (3%)
Frame = +3
Query: 699 QLPKQDLTLDHCKHIDEGHRKQYEDFVAARNEIALDIGIASQHHGSPLE---CIGCNKSI 869
QLP QD+ +C + E R + + F A R + AL G+A + LE C C + +
Sbjct: 33 QLPPQDIDERYCLALGEEERAELQLFCARRKQEALGQGVA-RLVLPKLEGHTCEKCRELL 91
Query: 870 RSGSITILAPXIGEDAFSTRXAFLLGMR*IASRTXL-LQLNGRLYXVRHYSEXLXPRCHA 1046
+ G + A GE + F A + +G+LY RH++E L PRC A
Sbjct: 92 KPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPA 151
Query: 1047 AMSL 1058
L
Sbjct: 152 CDQL 155
>AL365205-7|CAI13185.1| 384|Homo sapiens chromosome 6 open reading
frame 49 protein.
Length = 384
Score = 44.4 bits (100), Expect = 8e-04
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 4/124 (3%)
Frame = +3
Query: 699 QLPKQDLTLDHCKHIDEGHRKQYEDFVAARNEIALDIGIASQHHGSPLE---CIGCNKSI 869
QLP QD+ +C + E R + + F A R + AL G+A + LE C C + +
Sbjct: 73 QLPPQDIDERYCLALGEEERAELQLFCARRKQEALGQGVA-RLVLPKLEGHTCEKCRELL 131
Query: 870 RSGSITILAPXIGEDAFSTRXAFLLGMR*IASRTXL-LQLNGRLYXVRHYSEXLXPRCHA 1046
+ G + A GE + F A + +G+LY RH++E L PRC A
Sbjct: 132 KPGEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPA 191
Query: 1047 AMSL 1058
L
Sbjct: 192 CDQL 195
>BC000646-1|AAH00646.1| 365|Homo sapiens LIM and cysteine-rich
domains 1 protein.
Length = 365
Score = 43.6 bits (98), Expect = 0.001
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +3
Query: 381 SEGRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKH 485
+ G C C C GF H+WRK CKSC C + H
Sbjct: 23 ARGVACLGCKGTCSGFEPHSWRKICKSCKCSQEDH 57
>AK022176-1|BAB13976.1| 365|Homo sapiens protein ( Homo sapiens
cDNA FLJ12114 fis, clone MAMMA1000055, weakly similar to
TESTIN 2 (TES2) [CONTAINS: TESTIN 1 (TES1)]. ).
Length = 365
Score = 43.6 bits (98), Expect = 0.001
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +3
Query: 381 SEGRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKH 485
+ G C C C GF H+WRK CKSC C + H
Sbjct: 23 ARGVACLGCKGTCSGFEPHSWRKICKSCKCSQEDH 57
>AF216709-1|AAG36778.1| 365|Homo sapiens dyxin protein.
Length = 365
Score = 43.6 bits (98), Expect = 0.001
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +3
Query: 381 SEGRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKH 485
+ G C C C GF H+WRK CKSC C + H
Sbjct: 23 ARGVACLGCKGTCSGFEPHSWRKICKSCKCSQEDH 57
>AF169284-1|AAF34411.1| 365|Homo sapiens LIM and cysteine-rich
domains protein 1 protein.
Length = 365
Score = 43.6 bits (98), Expect = 0.001
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +3
Query: 381 SEGRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKH 485
+ G C C C GF H+WRK CKSC C + H
Sbjct: 23 ARGVACLGCKGTCSGFEPHSWRKICKSCKCSQEDH 57
>AK222840-1|BAD96560.1| 421|Homo sapiens testin isoform 1 variant
protein.
Length = 421
Score = 42.3 bits (95), Expect = 0.003
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3
Query: 387 GRPCDNCPELCPGFVSHAWRKTCKSCGCDRLKHSV 491
G PC C E C GF H RK C++C C + +H V
Sbjct: 19 GAPCLKCKEKCEGFELHFCRKICRNCKCGQEEHDV 53
>U93305-2|AAB92357.1| 407|Homo sapiens triple LIM domain protein
protein.
Length = 407
Score = 40.7 bits (91), Expect = 0.010
Identities = 32/119 (26%), Positives = 46/119 (38%), Gaps = 3/119 (2%)
Frame = +3
Query: 699 QLPKQDLTLDHCKHIDEGHRKQYEDFVAARNEIALDIGIASQHHGS--PLECIGCNKSIR 872
QLP D +C ++E +K+ F R L GI + C C K I
Sbjct: 67 QLPPHDSEAQYCTALEEEEKKELRAFSQQRKRENLGRGIVRIFPVTITGASCEECGKQIG 126
Query: 873 SGSITILAPXIGEDAFSTRXAFLLGM-R*IASRTXLLQLNGRLYXVRHYSEXLXPRCHA 1046
G I + A G A F+ + + G++Y RH++E L PRC A
Sbjct: 127 GGDIAVFASRAGLGACWHPQCFVCTTCQELLVDLIYFYHVGKVYCGRHHAECLRPRCQA 185
>BC119002-1|AAI19003.1| 844|Homo sapiens prickle homolog 2
(Drosophila) protein.
Length = 844
Score = 40.3 bits (90), Expect = 0.013
Identities = 37/162 (22%), Positives = 57/162 (35%), Gaps = 3/162 (1%)
Frame = +3
Query: 570 PPGLTAKQTELYWQSLAERTPTSXXXXXXXXXXXXXXXXXXXSQLPKQDLTLDHCKHIDE 749
PPGL +Q Y+ L E QLP D + +C +DE
Sbjct: 41 PPGLKPEQVHQYYSCLPEEK-----VPYVNSPGEKLRIKQLLHQLPPHDNEVRYCNSLDE 95
Query: 750 GHRKQYEDFVAARNEIALDIGIASQHHGSPLE--CIGCNKSIRSGSITILAPXIGEDAFS 923
+++ + F + R L G + C C I G I + A G
Sbjct: 96 EEKRELKLFSSQRKRENLGRGNVRPFPVTMTGAICEQCGGQINGGDIAVFASRAGHGVCW 155
Query: 924 TRXAFLLGM-R*IASRTXLLQLNGRLYXVRHYSEXLXPRCHA 1046
F+ + + +G++Y RH++E L PRC A
Sbjct: 156 HPPCFVCTVCNELLVDLIYFYQDGKIYCGRHHAECLKPRCAA 197
>X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein.
Length = 2628
Score = 33.1 bits (72), Expect = 2.0
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 8/60 (13%)
Frame = +3
Query: 348 FSETGVRIKEVSEGRPC-DNCPELCPGFVSHAWR-------KTCKSCGCDRLKHSVYHEE 503
+ ET +++ E C ++C CPG+ WR TC++C C Y++E
Sbjct: 281 WDETTKKLQCQCEHNTCGESCNRCCPGYHQQPWRPGTVSSGNTCEACNCHNKAKDCYYDE 340
>Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)
protein.
Length = 3110
Score = 32.7 bits (71), Expect = 2.6
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
Frame = +3
Query: 399 DNCPELCPGFVSHAWR------KT-CKSCGCDRLKHSVYHEE 503
D+C + CPGF WR KT C++C C Y++E
Sbjct: 316 DSCDQCCPGFHQKPWRAGTFLTKTECEACNCHGKAEECYYDE 357
>U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain
protein.
Length = 3110
Score = 32.7 bits (71), Expect = 2.6
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
Frame = +3
Query: 399 DNCPELCPGFVSHAWR------KT-CKSCGCDRLKHSVYHEE 503
D+C + CPGF WR KT C++C C Y++E
Sbjct: 316 DSCDQCCPGFHQKPWRAGTFLTKTECEACNCHGKAEECYYDE 357
>AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 32.7 bits (71), Expect = 2.6
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
Frame = +3
Query: 399 DNCPELCPGFVSHAWR------KT-CKSCGCDRLKHSVYHEE 503
D+C + CPGF WR KT C++C C Y++E
Sbjct: 316 DSCDQCCPGFHQKPWRAGTFLTKTECEACNCHGKAEECYYDE 357
>AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 32.7 bits (71), Expect = 2.6
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
Frame = +3
Query: 399 DNCPELCPGFVSHAWR------KT-CKSCGCDRLKHSVYHEE 503
D+C + CPGF WR KT C++C C Y++E
Sbjct: 316 DSCDQCCPGFHQKPWRAGTFLTKTECEACNCHGKAEECYYDE 357
>AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 32.7 bits (71), Expect = 2.6
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
Frame = +3
Query: 399 DNCPELCPGFVSHAWR------KT-CKSCGCDRLKHSVYHEE 503
D+C + CPGF WR KT C++C C Y++E
Sbjct: 316 DSCDQCCPGFHQKPWRAGTFLTKTECEACNCHGKAEECYYDE 357
>AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 32.7 bits (71), Expect = 2.6
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
Frame = +3
Query: 399 DNCPELCPGFVSHAWR------KT-CKSCGCDRLKHSVYHEE 503
D+C + CPGF WR KT C++C C Y++E
Sbjct: 316 DSCDQCCPGFHQKPWRAGTFLTKTECEACNCHGKAEECYYDE 357
>AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 32.7 bits (71), Expect = 2.6
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
Frame = +3
Query: 399 DNCPELCPGFVSHAWR------KT-CKSCGCDRLKHSVYHEE 503
D+C + CPGF WR KT C++C C Y++E
Sbjct: 316 DSCDQCCPGFHQKPWRAGTFLTKTECEACNCHGKAEECYYDE 357
>AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 32.7 bits (71), Expect = 2.6
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
Frame = +3
Query: 399 DNCPELCPGFVSHAWR------KT-CKSCGCDRLKHSVYHEE 503
D+C + CPGF WR KT C++C C Y++E
Sbjct: 316 DSCDQCCPGFHQKPWRAGTFLTKTECEACNCHGKAEECYYDE 357
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,489,347
Number of Sequences: 237096
Number of extensions: 3036172
Number of successful extensions: 7527
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 6904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7505
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 16032164540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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