Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_O06
         (1210 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   1.1  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   1.5  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   2.2  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   3.4  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    25   4.4  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.1 bits (57), Expect = 1.1
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 491 PPPPPPGXXKKXXPPFF 441
           PPPPPPG      PP F
Sbjct: 531 PPPPPPGGAVLNIPPQF 547



 Score = 26.6 bits (56), Expect = 1.5
 Identities = 16/45 (35%), Positives = 16/45 (35%)
 Frame = -2

Query: 408 PXNPRXPPFXXXXPFFPPFFXGXXPPPPXFFXFXGPPXPPXXGDP 274
           P NP    F    P  P       PPPP      GPP  P  G P
Sbjct: 561 PLNPAQLRFPAGFPNLPNAQPPPAPPPPPPM---GPPPSPLAGGP 602


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.6 bits (56), Expect = 1.5
 Identities = 12/20 (60%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
 Frame = -1

Query: 895 GGGXPXGGX-PXGGXXPGGG 839
           GGG P GG    GG  PGGG
Sbjct: 208 GGGAPGGGGGSSGGPGPGGG 227



 Score = 25.4 bits (53), Expect = 3.4
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -1

Query: 895 GGGXPXGGXPXGGXXPGGG 839
           GGG   GG P GG    GG
Sbjct: 203 GGGGSGGGAPGGGGGSSGG 221



 Score = 24.2 bits (50), Expect = 7.7
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -1

Query: 898 PGGGXPXGGXPXGGXXPGGG 839
           PGGG    G P  G   GGG
Sbjct: 212 PGGGGGSSGGPGPGGGGGGG 231


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.6 bits (51), Expect = 5.9
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +3

Query: 840 PPPGXXPPXGXPPXGXPPP 896
           PPP   PP    P G P P
Sbjct: 784 PPPPPPPPSSLSPGGVPRP 802



 Score = 22.6 bits (46), Expect(2) = 2.2
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 500 GXXPPPPPP 474
           G  PPPPPP
Sbjct: 781 GSPPPPPPP 789



 Score = 21.4 bits (43), Expect(2) = 2.2
 Identities = 7/14 (50%), Positives = 7/14 (50%)
 Frame = -3

Query: 491 PPPPPPGXXKKXXP 450
           PPPPPP       P
Sbjct: 783 PPPPPPPPPSSLSP 796


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.4 bits (53), Expect = 3.4
 Identities = 13/42 (30%), Positives = 13/42 (30%)
 Frame = +3

Query: 840 PPPGXXPPXGXPPXGXPPPGXXKXXKXXXXXXPPXXGXXGGG 965
           PPPG  P    P     P G            P   G  GGG
Sbjct: 495 PPPGGRPNAPNPSSAVTPGGGRAEGDKVTFQIPNGGGGGGGG 536


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 25.0 bits (52), Expect = 4.4
 Identities = 19/63 (30%), Positives = 19/63 (30%), Gaps = 3/63 (4%)
 Frame = -2

Query: 411 GPXNPRX--PPFXXXXPFFPPFFXGXXPPPPXFFXFXGPPXPPXXG-DPXXXXFXXPXXP 241
           GP  P    PP     P  P    G    PP      GP  PP  G  P          P
Sbjct: 70  GPPKPNISIPPPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPPMMVPTMGMP 129

Query: 240 PXG 232
           P G
Sbjct: 130 PMG 132


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.305    0.149    0.509 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 783,456
Number of Sequences: 2352
Number of extensions: 17500
Number of successful extensions: 34
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 137338992
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.7 bits)