Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_O04
         (1150 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            30   0.075
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    29   0.34 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   1.0  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   5.5  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   9.6  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 30.3 bits (65), Expect = 0.11
 Identities = 24/75 (32%), Positives = 24/75 (32%), Gaps = 3/75 (4%)
 Frame = -2

Query: 471 PPPPPPXGKXKXXPLFFXXFFSPPXXXXXXP--XXXPXXXXXPF-FXPLFFXXXPPXPXX 301
           PPPPPP G     P     F  PP      P     P     P  F  L     PP P  
Sbjct: 531 PPPPPPGGAVLNIP---PQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPP 587

Query: 300 FXXXGXXXPPXXGGP 256
               G    P  GGP
Sbjct: 588 PPPMGPPPSPLAGGP 602



 Score = 28.7 bits (61), Expect(2) = 0.075
 Identities = 24/90 (26%), Positives = 25/90 (27%)
 Frame = -3

Query: 773 PPXKGGXXXXXXXXXGPXXKTPXXXPFXXFXPFXXLFXKXFXXXXPPFXGXPXSPPXGXE 594
           PP  GG          P        PF    P    F   F     P    P +PP    
Sbjct: 533 PPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNL--PNAQPPPAPPP--- 587

Query: 593 XPXPPPXPRXPGXFXGGXGXGPXXXTPXXP 504
              PPP    P    GG   GP    P  P
Sbjct: 588 ---PPPMGPPPSPLAGGPLGGPAGSRPPLP 614



 Score = 26.6 bits (56), Expect = 1.4
 Identities = 12/32 (37%), Positives = 12/32 (37%)
 Frame = -2

Query: 585 PPPXTPXPRXFXGGXXXGXXKXNPXXPXXGGF 490
           PPP  P P    GG   G     P  P   GF
Sbjct: 588 PPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGF 619



 Score = 20.6 bits (41), Expect(2) = 0.075
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -3

Query: 899 PPPPPG 882
           PPPPPG
Sbjct: 532 PPPPPG 537


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 28.7 bits (61), Expect = 0.34
 Identities = 13/34 (38%), Positives = 14/34 (41%)
 Frame = +3

Query: 489 KXPXPXGXGGXXXGXXPXSPXKXTGXPGXGGGXG 590
           K   P   GG   G  P      +G PG GGG G
Sbjct: 196 KEDEPGAGGGGSGGGAPGGGGGSSGGPGPGGGGG 229



 Score = 27.1 bits (57), Expect = 1.0
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = +1

Query: 559 PGXRGXGGGXGFSXPXGGEXGXPKXGG 639
           PG  G G G G     GG  G P  GG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGG 226



 Score = 24.6 bits (51), Expect = 5.5
 Identities = 14/44 (31%), Positives = 15/44 (34%)
 Frame = +3

Query: 459 GGGGGFXXXKKXPXPXGXGGXXXGXXPXSPXKXTGXPGXGGGXG 590
           GGGGG           G GG           +  G  G GGG G
Sbjct: 213 GGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGGG 256


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 27.1 bits (57), Expect = 1.0
 Identities = 16/52 (30%), Positives = 17/52 (32%)
 Frame = +3

Query: 459 GGGGGFXXXKKXPXPXGXGGXXXGXXPXSPXKXTGXPGXGGGXGXFPPXXGG 614
           GGGGG           G GG   G       +  G  G G G G      GG
Sbjct: 517 GGGGGGSGCVNGSRTVGAGGMAGGGSDGPEYEGAGRGGVGSGIGGGGGGGGG 568


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.6 bits (51), Expect = 5.5
 Identities = 34/133 (25%), Positives = 35/133 (26%), Gaps = 5/133 (3%)
 Frame = +1

Query: 532 PXPXPPXKXPGXRGXGGGXGFSXPXG-----GEXGXPKXGGXXXKKXXXKRXXKGXKXXK 696
           P P  P    G RG  G  G   P G     G  G P   G    K        G    K
Sbjct: 50  PGPVGPRGLTGHRGEKGNSGPVGPPGAPGRDGMPGAPGLPGSKGVKGDPGLSMVGPPGPK 109

Query: 697 GXXXGVFXXGXXXXXXXXXXXXFXGGEXPXXIKKXXGXPPXXPPGXPXXXXRGKKKKXXP 876
           G        G              G       K   G P   PPG P     G K +  P
Sbjct: 110 GNPGLRGPKGERGGMGDRGDPGLPGSLGYPGEKGDLGTP--GPPGYPGDV--GPKGEPGP 165

Query: 877 XXPGGGGGXXXXP 915
             P G  G    P
Sbjct: 166 KGPAGHPGAPGRP 178


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.8 bits (49), Expect = 9.6
 Identities = 18/59 (30%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
 Frame = +1

Query: 538  PXPPXKXPGXRGXGGGXGFSXPXGGE-XGXPKXGGXXXKKXXXKRXXKGXKXXKGXXXG 711
            P P  K  G RG       S   GGE  G    GG        +R  KG K  +    G
Sbjct: 893  PAPEAKKKGGRGRKDYISDSDASGGEVGGGGGSGGEEGSGAPKERKRKGEKKPRKSQGG 951


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,145
Number of Sequences: 2352
Number of extensions: 11273
Number of successful extensions: 55
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 129164052
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)