Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_O04
(1150 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 37 0.002
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 37 0.002
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 37 0.002
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 38 0.013
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 38 0.013
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 38 0.018
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 38 0.018
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 38 0.018
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.054
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.054
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 35 0.12
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 34 0.16
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.38
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 31 0.54
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 32 0.88
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 32 0.88
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 31 1.5
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 2.0
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 2.0
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 2.0
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 2.0
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 2.0
AF036699-4|AAB88358.1| 281|Caenorhabditis elegans Collagen prot... 30 2.7
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 2.7
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 4.7
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 4.7
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 4.7
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 4.7
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 29 4.7
AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid deplete... 29 4.7
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 4.7
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 4.7
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 6.2
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 29 6.2
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 29 6.2
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 29 6.2
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 29 6.2
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 6.2
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 29 8.2
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 29 8.2
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 29 8.2
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 29 8.2
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.1 bits (82), Expect(2) = 0.002
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = -3
Query: 638 PPFXGXPXSPPXGXEXPXPPPXPRXPGXFXGG--XGXGPXXXTPXXPXXGXFFXXXKXP 468
PP G P PP PPP P PG F GG P P P + K P
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 810
Score = 36.3 bits (80), Expect = 0.041
Identities = 23/70 (32%), Positives = 23/70 (32%)
Frame = -3
Query: 638 PPFXGXPXSPPXGXEXPXPPPXPRXPGXFXGGXGXGPXXXTPXXPXXGXFFXXXKXPPPP 459
PP G P PP PP P PG G P P P G PPPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP----PPPPPGGLPPISGGPPPPP 762
Query: 458 PXXGKXKXXP 429
P G P
Sbjct: 763 PPPGGCPPPP 772
Score = 35.9 bits (79), Expect = 0.054
Identities = 24/70 (34%), Positives = 24/70 (34%), Gaps = 4/70 (5%)
Frame = -2
Query: 645 GXPPXFXXXXFPPXGXGKXXPPPXTPXPRXFXGGXXX----GXXKXNPXXPXXGGFFXXX 478
G PP PP G PPP P G G P P GGF
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF---K 781
Query: 477 KXPPPPPPXG 448
PPPPPP G
Sbjct: 782 GGPPPPPPPG 791
Score = 33.9 bits (74), Expect = 0.22
Identities = 27/83 (32%), Positives = 28/83 (33%), Gaps = 4/83 (4%)
Frame = -3
Query: 638 PPFXGXPXSPPXGXEXPX----PPPXPRXPGXFXGGXGXGPXXXTPXXPXXGXFFXXXKX 471
PP G P PP P PPP P PG G P P P G F
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPG------GCPPP---PPPPPPGGF---KGG 783
Query: 470 PPPPPXXGKXKXXPFFFXXFFPP 402
PPPPP G + PP
Sbjct: 784 PPPPPPPGMFAPMAPVIPDYLPP 806
Score = 22.6 bits (46), Expect(2) = 0.002
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -3
Query: 899 PPPPPGXXGXXFFFFPRXXXXGXPGGFXGGXPXXFFIXXGXSPPXKGG 756
PPPPPG P G P GG P G PP GG
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLP-PITGGPPPP--PPPGGLPPISGG 757
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.1 bits (82), Expect(2) = 0.002
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = -3
Query: 638 PPFXGXPXSPPXGXEXPXPPPXPRXPGXFXGG--XGXGPXXXTPXXPXXGXFFXXXKXP 468
PP G P PP PPP P PG F GG P P P + K P
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 810
Score = 36.3 bits (80), Expect = 0.041
Identities = 23/70 (32%), Positives = 23/70 (32%)
Frame = -3
Query: 638 PPFXGXPXSPPXGXEXPXPPPXPRXPGXFXGGXGXGPXXXTPXXPXXGXFFXXXKXPPPP 459
PP G P PP PP P PG G P P P G PPPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP----PPPPPGGLPPISGGPPPPP 762
Query: 458 PXXGKXKXXP 429
P G P
Sbjct: 763 PPPGGCPPPP 772
Score = 35.9 bits (79), Expect = 0.054
Identities = 24/70 (34%), Positives = 24/70 (34%), Gaps = 4/70 (5%)
Frame = -2
Query: 645 GXPPXFXXXXFPPXGXGKXXPPPXTPXPRXFXGGXXX----GXXKXNPXXPXXGGFFXXX 478
G PP PP G PPP P G G P P GGF
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF---K 781
Query: 477 KXPPPPPPXG 448
PPPPPP G
Sbjct: 782 GGPPPPPPPG 791
Score = 33.9 bits (74), Expect = 0.22
Identities = 27/83 (32%), Positives = 28/83 (33%), Gaps = 4/83 (4%)
Frame = -3
Query: 638 PPFXGXPXSPPXGXEXPX----PPPXPRXPGXFXGGXGXGPXXXTPXXPXXGXFFXXXKX 471
PP G P PP P PPP P PG G P P P G F
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPG------GCPPP---PPPPPPGGF---KGG 783
Query: 470 PPPPPXXGKXKXXPFFFXXFFPP 402
PPPPP G + PP
Sbjct: 784 PPPPPPPGMFAPMAPVIPDYLPP 806
Score = 22.6 bits (46), Expect(2) = 0.002
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -3
Query: 899 PPPPPGXXGXXFFFFPRXXXXGXPGGFXGGXPXXFFIXXGXSPPXKGG 756
PPPPPG P G P GG P G PP GG
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLP-PITGGPPPP--PPPGGLPPISGG 757
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.1 bits (82), Expect(2) = 0.002
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = -3
Query: 638 PPFXGXPXSPPXGXEXPXPPPXPRXPGXFXGG--XGXGPXXXTPXXPXXGXFFXXXKXP 468
PP G P PP PPP P PG F GG P P P + K P
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 393
Score = 36.3 bits (80), Expect = 0.041
Identities = 23/70 (32%), Positives = 23/70 (32%)
Frame = -3
Query: 638 PPFXGXPXSPPXGXEXPXPPPXPRXPGXFXGGXGXGPXXXTPXXPXXGXFFXXXKXPPPP 459
PP G P PP PP P PG G P P P G PPPP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP----PPPPPGGLPPISGGPPPPP 345
Query: 458 PXXGKXKXXP 429
P G P
Sbjct: 346 PPPGGCPPPP 355
Score = 35.9 bits (79), Expect = 0.054
Identities = 24/70 (34%), Positives = 24/70 (34%), Gaps = 4/70 (5%)
Frame = -2
Query: 645 GXPPXFXXXXFPPXGXGKXXPPPXTPXPRXFXGGXXX----GXXKXNPXXPXXGGFFXXX 478
G PP PP G PPP P G G P P GGF
Sbjct: 308 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF---K 364
Query: 477 KXPPPPPPXG 448
PPPPPP G
Sbjct: 365 GGPPPPPPPG 374
Score = 33.9 bits (74), Expect = 0.22
Identities = 27/83 (32%), Positives = 28/83 (33%), Gaps = 4/83 (4%)
Frame = -3
Query: 638 PPFXGXPXSPPXGXEXPX----PPPXPRXPGXFXGGXGXGPXXXTPXXPXXGXFFXXXKX 471
PP G P PP P PPP P PG G P P P G F
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPG------GCPPP---PPPPPPGGF---KGG 366
Query: 470 PPPPPXXGKXKXXPFFFXXFFPP 402
PPPPP G + PP
Sbjct: 367 PPPPPPPGMFAPMAPVIPDYLPP 389
Score = 22.6 bits (46), Expect(2) = 0.002
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -3
Query: 899 PPPPPGXXGXXFFFFPRXXXXGXPGGFXGGXPXXFFIXXGXSPPXKGG 756
PPPPPG P G P GG P G PP GG
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLP-PITGGPPPP--PPPGGLPPISGG 340
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 37.9 bits (84), Expect = 0.013
Identities = 25/88 (28%), Positives = 29/88 (32%), Gaps = 4/88 (4%)
Frame = -2
Query: 711 PPXXPFXXFXPFXXPFXXX----FFXGXPPXFXXXXFPPXGXGKXXPPPXTPXPRXFXGG 544
PP P+ P P+ F PP PP G+ PPP P P F G
Sbjct: 271 PPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMG 330
Query: 543 XXXGXXKXNPXXPXXGGFFXXXKXPPPP 460
G GG + PPPP
Sbjct: 331 PPRGFMPPPHPMMFRGGPYPPFFPPPPP 358
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 37.9 bits (84), Expect = 0.013
Identities = 25/88 (28%), Positives = 29/88 (32%), Gaps = 4/88 (4%)
Frame = -2
Query: 711 PPXXPFXXFXPFXXPFXXX----FFXGXPPXFXXXXFPPXGXGKXXPPPXTPXPRXFXGG 544
PP P+ P P+ F PP PP G+ PPP P P F G
Sbjct: 271 PPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMG 330
Query: 543 XXXGXXKXNPXXPXXGGFFXXXKXPPPP 460
G GG + PPPP
Sbjct: 331 PPRGFMPPPHPMMFRGGPYPPFFPPPPP 358
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 37.5 bits (83), Expect = 0.018
Identities = 21/68 (30%), Positives = 23/68 (33%)
Frame = -3
Query: 632 FXGXPXSPPXGXEXPXPPPXPRXPGXFXGGXGXGPXXXTPXXPXXGXFFXXXKXPPPPPX 453
F G +PP G P PPP P G P +P P G PPPP
Sbjct: 225 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 284
Query: 452 XGKXKXXP 429
G P
Sbjct: 285 AGGSPPPP 292
Score = 33.1 bits (72), Expect = 0.38
Identities = 22/68 (32%), Positives = 24/68 (35%), Gaps = 4/68 (5%)
Frame = -2
Query: 639 PPXFXXXXFPPX-GXGKXXPPPXTPXPRXFXGGXXXGXXKXNPXXPXXGGFFXXXK---X 472
PP PP G G PPP P G +P P GG +
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 471 PPPPPPXG 448
PPPPPP G
Sbjct: 298 PPPPPPRG 305
Score = 30.3 bits (65), Expect = 2.7
Identities = 23/71 (32%), Positives = 23/71 (32%), Gaps = 6/71 (8%)
Frame = -3
Query: 638 PPFXGXPXSPPXGXEXPXP----PPXPRX--PGXFXGGXGXGPXXXTPXXPXXGXFFXXX 477
PP G P PP G P P PP PR P G P P G
Sbjct: 266 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 325
Query: 476 KXPPPPPXXGK 444
PPPP K
Sbjct: 326 TGSPPPPPRQK 336
Score = 28.7 bits (61), Expect = 8.2
Identities = 22/76 (28%), Positives = 23/76 (30%), Gaps = 6/76 (7%)
Frame = -2
Query: 639 PPXFXXXXFPPXGXGKXXPPP-XTPXPRXFXGGXXXGXXKXNPXXPXXGGFFXXXKXPPP 463
PP PP G PPP +P P G P P G PPP
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 315
Query: 462 -----PPPXGKXKXXP 430
PPP G P
Sbjct: 316 QAGGSPPPAGTGSPPP 331
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 37.5 bits (83), Expect = 0.018
Identities = 21/68 (30%), Positives = 23/68 (33%)
Frame = -3
Query: 632 FXGXPXSPPXGXEXPXPPPXPRXPGXFXGGXGXGPXXXTPXXPXXGXFFXXXKXPPPPPX 453
F G +PP G P PPP P G P +P P G PPPP
Sbjct: 246 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 305
Query: 452 XGKXKXXP 429
G P
Sbjct: 306 AGGSPPPP 313
Score = 33.1 bits (72), Expect = 0.38
Identities = 22/68 (32%), Positives = 24/68 (35%), Gaps = 4/68 (5%)
Frame = -2
Query: 639 PPXFXXXXFPPX-GXGKXXPPPXTPXPRXFXGGXXXGXXKXNPXXPXXGGFFXXXK---X 472
PP PP G G PPP P G +P P GG +
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 471 PPPPPPXG 448
PPPPPP G
Sbjct: 319 PPPPPPRG 326
Score = 30.3 bits (65), Expect = 2.7
Identities = 23/71 (32%), Positives = 23/71 (32%), Gaps = 6/71 (8%)
Frame = -3
Query: 638 PPFXGXPXSPPXGXEXPXP----PPXPRX--PGXFXGGXGXGPXXXTPXXPXXGXFFXXX 477
PP G P PP G P P PP PR P G P P G
Sbjct: 287 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 346
Query: 476 KXPPPPPXXGK 444
PPPP K
Sbjct: 347 TGSPPPPPRQK 357
Score = 28.7 bits (61), Expect = 8.2
Identities = 22/76 (28%), Positives = 23/76 (30%), Gaps = 6/76 (7%)
Frame = -2
Query: 639 PPXFXXXXFPPXGXGKXXPPP-XTPXPRXFXGGXXXGXXKXNPXXPXXGGFFXXXKXPPP 463
PP PP G PPP +P P G P P G PPP
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 336
Query: 462 -----PPPXGKXKXXP 430
PPP G P
Sbjct: 337 QAGGSPPPAGTGSPPP 352
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 37.5 bits (83), Expect = 0.018
Identities = 21/68 (30%), Positives = 23/68 (33%)
Frame = -3
Query: 632 FXGXPXSPPXGXEXPXPPPXPRXPGXFXGGXGXGPXXXTPXXPXXGXFFXXXKXPPPPPX 453
F G +PP G P PPP P G P +P P G PPPP
Sbjct: 231 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 290
Query: 452 XGKXKXXP 429
G P
Sbjct: 291 AGGSPPPP 298
Score = 33.1 bits (72), Expect = 0.38
Identities = 22/68 (32%), Positives = 24/68 (35%), Gaps = 4/68 (5%)
Frame = -2
Query: 639 PPXFXXXXFPPX-GXGKXXPPPXTPXPRXFXGGXXXGXXKXNPXXPXXGGFFXXXK---X 472
PP PP G G PPP P G +P P GG +
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 471 PPPPPPXG 448
PPPPPP G
Sbjct: 304 PPPPPPRG 311
Score = 30.3 bits (65), Expect = 2.7
Identities = 23/71 (32%), Positives = 23/71 (32%), Gaps = 6/71 (8%)
Frame = -3
Query: 638 PPFXGXPXSPPXGXEXPXP----PPXPRX--PGXFXGGXGXGPXXXTPXXPXXGXFFXXX 477
PP G P PP G P P PP PR P G P P G
Sbjct: 272 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 331
Query: 476 KXPPPPPXXGK 444
PPPP K
Sbjct: 332 TGSPPPPPRQK 342
Score = 28.7 bits (61), Expect = 8.2
Identities = 22/76 (28%), Positives = 23/76 (30%), Gaps = 6/76 (7%)
Frame = -2
Query: 639 PPXFXXXXFPPXGXGKXXPPP-XTPXPRXFXGGXXXGXXKXNPXXPXXGGFFXXXKXPPP 463
PP PP G PPP +P P G P P G PPP
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 321
Query: 462 -----PPPXGKXKXXP 430
PPP G P
Sbjct: 322 QAGGSPPPAGTGSPPP 337
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.9 bits (79), Expect = 0.054
Identities = 21/62 (33%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Frame = -3
Query: 638 PPFXGX-PXSPPXGXEXPXPPPXPRXPGXFXGGXGXGPXXXTPXXPXXGXFFXXXKXPPP 462
PP G P PP PPP P PG G G P G PPP
Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 337
Query: 461 PP 456
PP
Sbjct: 338 PP 339
Score = 35.9 bits (79), Expect = 0.054
Identities = 22/64 (34%), Positives = 22/64 (34%), Gaps = 3/64 (4%)
Frame = -3
Query: 638 PPFXGXPXSPPXGXEXP---XPPPXPRXPGXFXGGXGXGPXXXTPXXPXXGXFFXXXKXP 468
P G P PP G P PPP PR P G P P P P
Sbjct: 328 PGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMI----PP 383
Query: 467 PPPP 456
PPPP
Sbjct: 384 PPPP 387
Score = 30.3 bits (65), Expect = 2.7
Identities = 22/71 (30%), Positives = 24/71 (33%), Gaps = 1/71 (1%)
Frame = -3
Query: 638 PPFXGXPXSPPXGXEXPXPPPXPR-XPGXFXGGXGXGPXXXTPXXPXXGXFFXXXKXPPP 462
PP G S G P PPP P P G P P G + PPP
Sbjct: 246 PPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMW-----PPPP 300
Query: 461 PPXXGKXKXXP 429
PP G+ P
Sbjct: 301 PPPPGRTPGPP 311
Score = 29.5 bits (63), Expect = 4.7
Identities = 23/74 (31%), Positives = 24/74 (32%), Gaps = 2/74 (2%)
Frame = -2
Query: 645 GXPPXFXXXXFPPXGXGKXXPPPXTPXPRXFXGGXXXGXXKXNPXXPXXGGFFXXXKXP- 469
G PP F P G G PPP P + GG P P G P
Sbjct: 315 GMPPPPPPSRFGPPGMGGMPPPP--PPGMRYPGGM---PPPPPPRYPSAGPGMYPPPPPS 369
Query: 468 -PPPPPXGKXKXXP 430
PP PP G P
Sbjct: 370 RPPAPPSGHGMIPP 383
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.9 bits (79), Expect = 0.054
Identities = 21/62 (33%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Frame = -3
Query: 638 PPFXGX-PXSPPXGXEXPXPPPXPRXPGXFXGGXGXGPXXXTPXXPXXGXFFXXXKXPPP 462
PP G P PP PPP P PG G G P G PPP
Sbjct: 288 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 347
Query: 461 PP 456
PP
Sbjct: 348 PP 349
Score = 35.9 bits (79), Expect = 0.054
Identities = 22/64 (34%), Positives = 22/64 (34%), Gaps = 3/64 (4%)
Frame = -3
Query: 638 PPFXGXPXSPPXGXEXP---XPPPXPRXPGXFXGGXGXGPXXXTPXXPXXGXFFXXXKXP 468
P G P PP G P PPP PR P G P P P P
Sbjct: 338 PGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMI----PP 393
Query: 467 PPPP 456
PPPP
Sbjct: 394 PPPP 397
Score = 30.3 bits (65), Expect = 2.7
Identities = 22/71 (30%), Positives = 24/71 (33%), Gaps = 1/71 (1%)
Frame = -3
Query: 638 PPFXGXPXSPPXGXEXPXPPPXPR-XPGXFXGGXGXGPXXXTPXXPXXGXFFXXXKXPPP 462
PP G S G P PPP P P G P P G + PPP
Sbjct: 256 PPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMW-----PPPP 310
Query: 461 PPXXGKXKXXP 429
PP G+ P
Sbjct: 311 PPPPGRTPGPP 321
Score = 29.5 bits (63), Expect = 4.7
Identities = 23/74 (31%), Positives = 24/74 (32%), Gaps = 2/74 (2%)
Frame = -2
Query: 645 GXPPXFXXXXFPPXGXGKXXPPPXTPXPRXFXGGXXXGXXKXNPXXPXXGGFFXXXKXP- 469
G PP F P G G PPP P + GG P P G P
Sbjct: 325 GMPPPPPPSRFGPPGMGGMPPPP--PPGMRYPGGM---PPPPPPRYPSAGPGMYPPPPPS 379
Query: 468 -PPPPPXGKXKXXP 430
PP PP G P
Sbjct: 380 RPPAPPSGHGMIPP 393
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 34.7 bits (76), Expect = 0.12
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = +3
Query: 438 FXFSXXGGGGGGFXXXKKXPXPXGXGGXXXGXXPXSPXKXTGXPGXGGGXGXFPP 602
F GGGG G P P G GG P P P GGG G PP
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPSPCGCGGGGGLALPQLPP--LSLPSLGGGGGCCPP 69
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 34.3 bits (75), Expect = 0.16
Identities = 21/70 (30%), Positives = 21/70 (30%)
Frame = -3
Query: 638 PPFXGXPXSPPXGXEXPXPPPXPRXPGXFXGGXGXGPXXXTPXXPXXGXFFXXXKXPPPP 459
PP P PP P PPP P P G P P P PPP
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGV-PLPVPPPPPLFSPSMILPPPPPPL 1396
Query: 458 PXXGKXKXXP 429
P K P
Sbjct: 1397 PSEEKKNPLP 1406
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 33.1 bits (72), Expect = 0.38
Identities = 22/61 (36%), Positives = 22/61 (36%)
Frame = +1
Query: 457 GGGGGXFXXXKKXPXXGXXGVXFXGPXPXPPXKXPGXRGXGGGXGFSXPXGGEXGXPKXG 636
GGGGG G G P P PP G G GGG G GG G G
Sbjct: 87 GGGGGCGGGGGGCGGGGGCGGG-CAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGG 145
Query: 637 G 639
G
Sbjct: 146 G 146
Score = 31.1 bits (67), Expect = 1.5
Identities = 24/72 (33%), Positives = 24/72 (33%), Gaps = 5/72 (6%)
Frame = +1
Query: 439 FXFPXXGGGGGXFXXXKKXPXXGXXGVXFX-----GPXPXPPXKXPGXRGXGGGXGFSXP 603
F FP GGGGG G G P P PP G G GGG G
Sbjct: 18 FLFPSGGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGG 77
Query: 604 XGGEXGXPKXGG 639
G G GG
Sbjct: 78 GCGGGGGCGGGG 89
Score = 29.5 bits (63), Expect = 4.7
Identities = 22/62 (35%), Positives = 22/62 (35%), Gaps = 3/62 (4%)
Frame = +3
Query: 438 FXFSXXGGGGGGFXXXKKXPXP---XGXGGXXXGXXPXSPXKXTGXPGXGGGXGXFPPXX 608
F F GGGGGG G GG G P P G G GGG G
Sbjct: 18 FLFPSGGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGG-GCGGGGGGCGGGG 76
Query: 609 GG 614
GG
Sbjct: 77 GG 78
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 31.1 bits (67), Expect = 1.5
Identities = 32/121 (26%), Positives = 36/121 (29%), Gaps = 2/121 (1%)
Frame = -2
Query: 612 PPXGXGKXXPPPXTPXPRXFXGGXXXGXXKXNPXXPXXGGFFXXXKXPPPPPPXGKXKXX 433
PP G G PPP T P+ G G P P G PPPPP G+ +
Sbjct: 130 PPKGTGSPPPPP-TGEPQDLSG---EGNASRRPPPPPKG------TGSPPPPPTGEPQDL 179
Query: 432 PLFFXXFF--SPPXXXXXXPXXXPXXXXXPFFXPLFFXXXPPXPXXFXXXGXXXPPXXGG 259
PP P P + PP P G PP G
Sbjct: 180 STEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPP--KGTGSPTPPPTGE 237
Query: 258 P 256
P
Sbjct: 238 P 238
Score = 30.7 bits (66), Expect = 2.0
Identities = 20/56 (35%), Positives = 22/56 (39%)
Frame = -2
Query: 612 PPXGXGKXXPPPXTPXPRXFXGGXXXGXXKXNPXXPXXGGFFXXXKXPPPPPPXGK 445
PP G G PPP T P+ G G P P G PPPPP G+
Sbjct: 223 PPKGTGSPTPPP-TGEPQDLSG---EGNASRRPPPPPKG------TGSPPPPPTGE 268
Score = 30.3 bits (65), Expect(2) = 0.54
Identities = 20/56 (35%), Positives = 22/56 (39%)
Frame = -2
Query: 612 PPXGXGKXXPPPXTPXPRXFXGGXXXGXXKXNPXXPXXGGFFXXXKXPPPPPPXGK 445
PP G G PPP T P+ G G P P G PPPPP G+
Sbjct: 36 PPKGTGTPPPPP-TGEPQDLSG---EGNASRRPPPPPKG------TGTPPPPPTGE 81
Score = 30.3 bits (65), Expect = 2.7
Identities = 20/56 (35%), Positives = 22/56 (39%)
Frame = -2
Query: 612 PPXGXGKXXPPPXTPXPRXFXGGXXXGXXKXNPXXPXXGGFFXXXKXPPPPPPXGK 445
PP G G PPP T P+ G G P P G PPPPP G+
Sbjct: 99 PPKGTGTPPPPP-TGEPQDLSG---EGNASRRPPPPPKG------TGSPPPPPTGE 144
Score = 28.3 bits (60), Expect(2) = 1.5
Identities = 19/56 (33%), Positives = 21/56 (37%)
Frame = -2
Query: 612 PPXGXGKXXPPPXTPXPRXFXGGXXXGXXKXNPXXPXXGGFFXXXKXPPPPPPXGK 445
PP G G PPP T P+ G P P G PPPPP G+
Sbjct: 67 PPKGTGTPPPPP-TGEPQDLSA--EEGNASRRPPPPPKG------TGTPPPPPTGE 113
Score = 21.4 bits (43), Expect(2) = 1.5
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = -2
Query: 468 PPPPPXGKXKXXP 430
PPPPP G P
Sbjct: 127 PPPPPKGTGSPPP 139
Score = 21.0 bits (42), Expect(2) = 0.54
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = -2
Query: 468 PPPPPXGKXKXXP 430
PPPPP G P
Sbjct: 96 PPPPPKGTGTPPP 108
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.9 bits (69), Expect = 0.88
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = -3
Query: 635 PFXGXPXSPPXGXEXPXPPPXPRXPGXFXGGXGXGPXXXTPXXPXXGXFFXXXKXPPPPP 456
P G P + P P PPP P+ G P P P G PPPPP
Sbjct: 596 PNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPP--PPPPPPPMGLPAVGAGAPPPPP 653
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = -2
Query: 585 PPPXTPXPRXFXGGXXXGXXKXNPXXPXXGGFFXXXKXPPPPPP 454
PPP P P+ F P P G PPPPP
Sbjct: 610 PPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPP 653
Score = 28.7 bits (61), Expect = 8.2
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -1
Query: 529 PKXKPPXPXGXGXFXXXKXPPPPPP 455
P PP P G PPPPPP
Sbjct: 631 PPPPPPPPMGLPAVGAGAPPPPPPP 655
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.9 bits (69), Expect = 0.88
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = -3
Query: 635 PFXGXPXSPPXGXEXPXPPPXPRXPGXFXGGXGXGPXXXTPXXPXXGXFFXXXKXPPPPP 456
P G P + P P PPP P+ G P P P G PPPPP
Sbjct: 422 PNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPP--PPPPPPPMGLPAVGAGAPPPPP 479
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = -2
Query: 585 PPPXTPXPRXFXGGXXXGXXKXNPXXPXXGGFFXXXKXPPPPPP 454
PPP P P+ F P P G PPPPP
Sbjct: 436 PPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPP 479
Score = 28.7 bits (61), Expect = 8.2
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -1
Query: 529 PKXKPPXPXGXGXFXXXKXPPPPPP 455
P PP P G PPPPPP
Sbjct: 457 PPPPPPPPMGLPAVGAGAPPPPPPP 481
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +3
Query: 447 SXXGGGGGGFXXXKKXPXPXGXGGXXXGXXPXSPXKXTGXPGXGGGXGXFPP 602
S GGGGGG G GG P G G GGG G PP
Sbjct: 24 SAGGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPP 75
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +3
Query: 447 SXXGGGGGGFXXXKKXPXPXGXGGXXXGXXPXSPXKXTGXPGXGGGXGXFPP 602
S GGGGGG G GG P G G GGG G PP
Sbjct: 24 SAGGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPP 75
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 31.1 bits (67), Expect = 1.5
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = +3
Query: 768 GGGXPXGNKKXXGXPPXKXPGGPXXXXPGEKKKXXPXXPXGRGG 899
G P GNK G P P GP PG K P P G+ G
Sbjct: 149 GPPGPDGNKGPLGPPGPPGPEGP-NGEPGNKGPAGPPGPGGKPG 191
Score = 29.1 bits (62), Expect = 6.2
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +3
Query: 495 PXPXGXGGXXXGXXPXSPXKXTGXPGXGGGXGXFPPXXGGXXXP 626
P P G G P P G PG G G PP GG P
Sbjct: 151 PGPDGNKGPLGPPGPPGPEGPNGEPGNKGPAG--PPGPGGKPGP 192
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -2
Query: 612 PPXGXGKXXPPPXTPXPRXFXGGXXXGXXKXNPXXPXXGGFFXXXKXPPPPPP 454
PP G PPP P P G G K P P PPPPPP
Sbjct: 542 PPVGMANGGPPPPPPLPLDLLKGAVAG-LKSVPGGP--------PPPPPPPPP 585
Score = 29.5 bits (63), Expect = 4.7
Identities = 22/66 (33%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = -3
Query: 638 PPFXGXPXS--PPXGXEXPXPPPXPRXPGXFXGGXGXGPXXXTPXXPXXGXFFXXXKXPP 465
PP G P S P P PPP P G P P P G PP
Sbjct: 470 PPPPGPPSSLLPLINTNAPPPPPMPSI-----NGHAPNPP---PPPPLLGIAPMSTNAPP 521
Query: 464 PPPXXG 447
PPP G
Sbjct: 522 PPPMPG 527
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/45 (42%), Positives = 19/45 (42%)
Frame = +3
Query: 456 GGGGGGFXXXKKXPXPXGXGGXXXGXXPXSPXKXTGXPGXGGGXG 590
GGGGGG P P G GG P P K G PG G G
Sbjct: 91 GGGGGGGCDGCCNPGPPGPGGSP--GKPGKPGK-PGAPGAPGNPG 132
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/45 (42%), Positives = 19/45 (42%)
Frame = +3
Query: 456 GGGGGGFXXXKKXPXPXGXGGXXXGXXPXSPXKXTGXPGXGGGXG 590
GGGGGG P P G GG P P K G PG G G
Sbjct: 91 GGGGGGGCDGCCNPGPPGPGGSP--GKPGKPGK-PGAPGAPGNPG 132
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/45 (42%), Positives = 19/45 (42%)
Frame = +3
Query: 456 GGGGGGFXXXKKXPXPXGXGGXXXGXXPXSPXKXTGXPGXGGGXG 590
GGGGGG P P G GG P P K G PG G G
Sbjct: 91 GGGGGGGCDGCCNPGPPGPGGSP--GKPGKPGK-PGAPGAPGNPG 132
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/45 (42%), Positives = 19/45 (42%)
Frame = +3
Query: 456 GGGGGGFXXXKKXPXPXGXGGXXXGXXPXSPXKXTGXPGXGGGXG 590
GGGGGG P P G GG P P K G PG G G
Sbjct: 91 GGGGGGGCDGCCNPGPPGPGGSP--GKPGKPGK-PGAPGAPGNPG 132
>AF036699-4|AAB88358.1| 281|Caenorhabditis elegans Collagen protein
104 protein.
Length = 281
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = +1
Query: 532 PXPXPPXKXPGXRGXGGGXGFSXPXG--GEXGXPKXGG 639
P P P PG +G G G P G G G P GG
Sbjct: 144 PGPAGPPGAPGDKGNDGAPGLRGPDGHPGHPGNPGYGG 181
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.3 bits (65), Expect = 2.7
Identities = 21/64 (32%), Positives = 22/64 (34%)
Frame = +1
Query: 448 PXXGGGGGXFXXXKKXPXXGXXGVXFXGPXPXPPXKXPGXRGXGGGXGFSXPXGGEXGXP 627
P GGGGG F P G G G G GG G+S GG G
Sbjct: 318 PAGGGGGGDF------PAGGGGGGYSTGGGGGRADSGGAAGGAGGAGGYSGGGGGGGGGA 371
Query: 628 KXGG 639
GG
Sbjct: 372 AAGG 375
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.5 bits (63), Expect = 4.7
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -3
Query: 638 PPFXGXPXSPPXGXEXPXPPPXPRXPGXFXGGXGXGPXXXTPXXPXXG 495
PP PP G PPP R P GG G P P G
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPG 820
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -3
Query: 638 PPFXGXPXSPPXGXEXPXPPPXP-RXPGXFXGGXGXGP 528
PP P P + P PP P + PG + G G GP
Sbjct: 701 PPTSVQPPQPQQPPQGPPGPPGPQQHPGPYPGYPGYGP 738
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.5 bits (63), Expect = 4.7
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = -3
Query: 620 PXSPPXGXEXPXPPPXPRXPGXFXGGXGXGPXXXTPXXP 504
P SPP PP P+ P G G P P P
Sbjct: 57 PSSPPPAPRPSGQPPGPQGPSDLPGPSGAPPGPPHPSGP 95
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.5 bits (63), Expect = 4.7
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -3
Query: 638 PPFXGXPXSPPXGXEXPXPPPXPRXPGXFXGGXGXGPXXXTPXXPXXG 495
PP PP G PPP R P GG G P P G
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPG 820
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 29.5 bits (63), Expect = 4.7
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +1
Query: 562 GXRGXGGGXGFSXPXGGEXGXPKXGG 639
G RG GGG GF GG+ G GG
Sbjct: 15 GGRGGGGGGGFRGGRGGDRGGGFRGG 40
>AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid depleted
protein 6 protein.
Length = 573
Score = 29.5 bits (63), Expect = 4.7
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +1
Query: 562 GXRGXGGGXGFSXPXGGEXGXPKXGG 639
G RG GGG GF GG+ G GG
Sbjct: 546 GFRGRGGGGGFRGGRGGDRGGGFRGG 571
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 29.5 bits (63), Expect = 4.7
Identities = 15/50 (30%), Positives = 18/50 (36%)
Frame = +1
Query: 463 GGGXFXXXKKXPXXGXXGVXFXGPXPXPPXKXPGXRGXGGGXGFSXPXGG 612
GGG G G + PP P GGG G++ P GG
Sbjct: 36 GGGAPPCSSSSYATGGGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 29.5 bits (63), Expect = 4.7
Identities = 15/50 (30%), Positives = 18/50 (36%)
Frame = +1
Query: 463 GGGXFXXXKKXPXXGXXGVXFXGPXPXPPXKXPGXRGXGGGXGFSXPXGG 612
GGG G G + PP P GGG G++ P GG
Sbjct: 36 GGGAPPCSSSSYATGGGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 29.1 bits (62), Expect = 6.2
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = +3
Query: 456 GGGGGGFXXXKKXPXPXGXGGXXXGXXPXSPXKXTGXPGXGGGXGXFPPXXGGXXXPXKX 635
GGGGG + P G G P G PG G G P GG P
Sbjct: 87 GGGGGCQCAAQASGCPAGPPGPPGPDGSAGPAGPAGNPGADGDAGS-PGEAGGAGPPGPP 145
Query: 636 G 638
G
Sbjct: 146 G 146
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 29.1 bits (62), Expect = 6.2
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +3
Query: 456 GGGGGGFXXXKKXPXPXGXGGXXXGXXPXSPXKXTGXPGXGGGXGXFP 599
GGGGGG P P G GG G PG G G P
Sbjct: 93 GGGGGGQCSTCCRPGPPGAGGTPGKPGRPGAPGAWGMPGNPGKGGSGP 140
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 29.1 bits (62), Expect = 6.2
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = +3
Query: 456 GGGGGGFXXXKKXPXPXGXGGXXXGXXPXSPXKXTGXPGXGGGXGXFPPXXGGXXXPXKX 635
GGGGG + P G G P G PG G G P GG P
Sbjct: 87 GGGGGCQCAAQASGCPAGPPGPPGPDGSAGPAGPAGNPGADGDAGS-PGEAGGAGPPGPP 145
Query: 636 G 638
G
Sbjct: 146 G 146
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 29.1 bits (62), Expect = 6.2
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = +1
Query: 532 PXPXPPXKXPGXRGXGGGXGFSXPXG--GEXGXPKXGG 639
P P P PG GGG G + P G G+ G P G
Sbjct: 145 PGPQGPSGAPGQDAVGGGPGPAGPQGPAGDAGAPGQAG 182
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 6.2
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 4/59 (6%)
Frame = -2
Query: 612 PPXGXGKXXPPPXT----PXPRXFXGGXXXGXXKXNPXXPXXGGFFXXXKXPPPPPPXG 448
PP G PPP P P F GG P F PPPPPP G
Sbjct: 67 PPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMF---GAPPPPPPPSG 122
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 29.1 bits (62), Expect = 6.2
Identities = 19/48 (39%), Positives = 19/48 (39%)
Frame = +3
Query: 456 GGGGGGFXXXKKXPXPXGXGGXXXGXXPXSPXKXTGXPGXGGGXGXFP 599
GGGGGG P P G G P P K G PG G G P
Sbjct: 94 GGGGGGNCEACCLPGPAGPAGAPGN--PGRPGK-PGAPGLPGNPGKPP 138
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 29.1 bits (62), Expect = 6.2
Identities = 18/63 (28%), Positives = 25/63 (39%)
Frame = +3
Query: 402 GGKKXXKKKGXXFXFSXXGGGGGGFXXXKKXPXPXGXGGXXXGXXPXSPXKXTGXPGXGG 581
GG+ ++G ++ GGGGGG+ + P GG G G G G
Sbjct: 208 GGRSRDGQRGG---YNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQG 264
Query: 582 GXG 590
G G
Sbjct: 265 GGG 267
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 29.1 bits (62), Expect = 6.2
Identities = 18/63 (28%), Positives = 25/63 (39%)
Frame = +3
Query: 402 GGKKXXKKKGXXFXFSXXGGGGGGFXXXKKXPXPXGXGGXXXGXXPXSPXKXTGXPGXGG 581
GG+ ++G ++ GGGGGG+ + P GG G G G G
Sbjct: 170 GGRSRDGQRGG---YNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQG 226
Query: 582 GXG 590
G G
Sbjct: 227 GGG 229
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 29.1 bits (62), Expect = 6.2
Identities = 18/63 (28%), Positives = 25/63 (39%)
Frame = +3
Query: 402 GGKKXXKKKGXXFXFSXXGGGGGGFXXXKKXPXPXGXGGXXXGXXPXSPXKXTGXPGXGG 581
GG+ ++G ++ GGGGGG+ + P GG G G G G
Sbjct: 208 GGRSRDGQRGG---YNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQG 264
Query: 582 GXG 590
G G
Sbjct: 265 GGG 267
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 6.2
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -2
Query: 585 PPPXTPXPRXFXGGXXXGXXKXNPXXPXXGGFFXXXKXPPPPPPXG 448
PPP P P+ G P P GG PPPPPP G
Sbjct: 562 PPPPPPLPQNLSGAPPPPP----PPPPMLGG-----PPPPPPPPGG 598
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 28.7 bits (61), Expect = 8.2
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -3
Query: 635 PFXGXPXSPPXGXEXPXPPPXPRXPGXFXGG 543
P G P PP G P PPP P G GG
Sbjct: 51 PAAGYPR-PPIGYGAPPPPPPPPAFGGLGGG 80
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 28.7 bits (61), Expect = 8.2
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -3
Query: 635 PFXGXPXSPPXGXEXPXPPPXPRXPGXFXGG 543
P G P PP G P PPP P G GG
Sbjct: 51 PAAGYPR-PPIGYGAPPPPPPPPAFGGLGGG 80
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 28.7 bits (61), Expect = 8.2
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -3
Query: 635 PFXGXPXSPPXGXEXPXPPPXPRXPGXFXGG 543
P G P PP G P PPP P G GG
Sbjct: 51 PAAGYPR-PPIGYGAPPPPPPPPAFGGLGGG 80
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 28.7 bits (61), Expect = 8.2
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = -2
Query: 708 PXXPFXXFXPFXXPFXXXFFXGXPPXFXXXXFPPXGXGKXXPPPXTP 568
P P F P P G PP F PP PPP P
Sbjct: 121 PACPPPCFGPACAPSAPIIVNGPPPCFGPACPPPCFGPACAPPPPAP 167
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,867,877
Number of Sequences: 27780
Number of extensions: 371883
Number of successful extensions: 4088
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2596
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3119902942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -