Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_N19
(1181 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0980 + 26520832-26520922,26521021-26521409,26521612-265219... 55 1e-07
04_04_0862 + 28843654-28844386,28844486-28844895,28844995-288455... 50 3e-06
08_02_0598 - 19149218-19149524,19150325-19150896,19151374-191517... 50 4e-06
02_05_0304 + 27721413-27721479,27721561-27722208,27722399-277233... 47 3e-05
09_03_0047 - 11867302-11867356,11867461-11868032,11868485-118688... 44 2e-04
10_08_0682 + 19858131-19858230,19858313-19858954,19859041-198600... 42 0.001
03_01_0127 + 988066-988171,988259-988881,988986-989396,989463-99... 42 0.001
12_02_1218 - 27088206-27088214,27088577-27088643,27088755-270888... 35 0.14
07_03_1216 + 24940426-24940714,24940800-24940877,24941954-249421... 33 0.44
05_05_0016 - 21542300-21542886,21542956-21543286,21543310-215434... 33 0.58
02_03_0350 + 18027932-18028125,18028185-18028270,18028889-18028980 33 0.58
03_02_0259 - 6920472-6920579,6920744-6921022,6921115-6921390,692... 32 0.77
10_08_0628 + 19389508-19389637,19389774-19389850,19390332-193904... 32 1.0
04_04_1481 - 33894175-33894537,33894618-33894739,33894841-33895225 31 1.3
09_03_0076 - 12120900-12121183,12123083-12123188 31 1.8
09_04_0617 - 18981258-18981949,18983869-18984427 31 2.3
04_04_1545 - 34278266-34278586,34278685-34279114,34279225-342793... 30 3.1
03_02_0260 - 6924532-6924757,6925443-6925546,6925729-6926007,692... 29 5.4
11_06_0192 + 21128298-21128829,21129341-21129407,21131169-211312... 29 9.5
>06_03_0980 +
26520832-26520922,26521021-26521409,26521612-26521927,
26522869-26523769,26524103-26524184
Length = 592
Score = 55.2 bits (127), Expect = 1e-07
Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 5/120 (4%)
Frame = +3
Query: 327 YDFIIVGAGTAGSALAARLSEVANFSVLLLEAGGDP---PIEAIIPAFRETLKASSVDWN 497
YD+I+VG GTAG LAA L+ VL+LE GG P P A F TL +
Sbjct: 55 YDYIVVGGGTAGCPLAATLAGPGGGRVLVLERGGAPAEFPPLATAGGFVRTLAMAD---- 110
Query: 498 FTSVENNITSQ--ALKRGIEQQPRGKMLGGSGSLNHMVYARGFPSDYHEWASIAGETWNW 671
+ E++ +Q A + G+ R ++LGG+ S+N Y+R P D+ GE NW
Sbjct: 111 -PAPESDAPAQTFASEDGV-PNVRARVLGGATSINAGFYSRAHP-DWFRSHGEGGEAMNW 167
>04_04_0862 +
28843654-28844386,28844486-28844895,28844995-28845560,
28845737-28845803
Length = 591
Score = 50.4 bits (115), Expect = 3e-06
Identities = 44/113 (38%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Frame = +3
Query: 288 TWPKDSVLQ-NGSRYDFIIVGAGTAGSALAARLSEVANFSVLLLEAGGDP-PIEAI--IP 455
T+ KD+V S YD+IIVG GTAG LAA LS+ F VLLLE GG P E I +
Sbjct: 35 TFMKDAVQSPQVSYYDYIIVGGGTAGCPLAATLSQ--RFRVLLLERGGSPYDDERIGNMT 92
Query: 456 AFRETLKASSVDWNFTSVENNITSQALKRGIEQQPRGKMLGGSGSLNHMVYAR 614
F +TL +S + + ++ + I +PR +LGG +N Y R
Sbjct: 93 RFADTLSDTSPS---SPAQRFVSEDGV---INSRPR--VLGGGSCINAGFYTR 137
>08_02_0598 -
19149218-19149524,19150325-19150896,19151374-19151762,
19151850-19152163,19152312-19152356,19153451-19153805,
19154361-19154430
Length = 683
Score = 50.0 bits (114), Expect = 4e-06
Identities = 40/100 (40%), Positives = 49/100 (49%)
Frame = +3
Query: 327 YDFIIVGAGTAGSALAARLSEVANFSVLLLEAGGDPPIEAIIPAFRETLKASSVDWNFTS 506
YD+IIVG GTAG LAA LS+ + VLLLE GG P I + E D + S
Sbjct: 50 YDYIIVGGGTAGCPLAATLSQ--KYKVLLLERGGSPYGNRNI-SHLENFHICLADDSPNS 106
Query: 507 VENNITSQALKRGIEQQPRGKMLGGSGSLNHMVYARGFPS 626
S G+ R K+LGG S+N Y+R PS
Sbjct: 107 PSQGFIS---TDGV-INARAKVLGGGTSVNAGFYSRADPS 142
>02_05_0304 +
27721413-27721479,27721561-27722208,27722399-27723371,
27724196-27724237,27724379-27724466,27724911-27725016,
27726499-27726614
Length = 679
Score = 46.8 bits (106), Expect = 3e-05
Identities = 36/99 (36%), Positives = 48/99 (48%)
Frame = +3
Query: 327 YDFIIVGAGTAGSALAARLSEVANFSVLLLEAGGDPPIEAIIPAFRETLKASSVDWNFTS 506
YD+II+G GTAG LAA LSE + VLLLE GG P +A + + D + S
Sbjct: 43 YDYIIIGGGTAGCPLAATLSE--RYRVLLLERGGSPYDDARVLNMAHFADVLA-DTSGAS 99
Query: 507 VENNITSQALKRGIEQQPRGKMLGGSGSLNHMVYARGFP 623
S+ I +PR +LGG +N + R P
Sbjct: 100 PSQRFVSE--DGVINARPR--VLGGGSCINAGFFTRAGP 134
>09_03_0047 -
11867302-11867356,11867461-11868032,11868485-11868873,
11869018-11869331,11871028-11871382,11872004-11872076
Length = 585
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = +3
Query: 327 YDFIIVGAGTAGSALAARLSEVANFSVLLLEAGGDP 434
YD+I+VG GTAG LAA LS + VLLLE GG P
Sbjct: 51 YDYIVVGGGTAGCPLAATLS--LKYKVLLLERGGSP 84
>10_08_0682 +
19858131-19858230,19858313-19858954,19859041-19860016,
19860105-19860147
Length = 586
Score = 41.5 bits (93), Expect = 0.001
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = +3
Query: 321 SRYDFIIVGAGTAGSALAARLSEVANFSVLLLEAGGDP 434
S Y++I++G GTAG LAA LSE + VLLLE GG P
Sbjct: 52 SSYNYIVIGGGTAGCPLAATLSE--HSRVLLLERGGLP 87
>03_01_0127 +
988066-988171,988259-988881,988986-989396,989463-990037,
990137-990194
Length = 590
Score = 41.5 bits (93), Expect = 0.001
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +3
Query: 321 SRYDFIIVGAGTAGSALAARLSEVANFSVLLLEAGGDP 434
S Y++I+VG GTAG LAA LSE + VLLLE GG P
Sbjct: 55 SYYNYIVVGGGTAGCPLAATLSERSR--VLLLERGGLP 90
>12_02_1218 -
27088206-27088214,27088577-27088643,27088755-27088821,
27088934-27089054,27089272-27089351,27089574-27089686,
27090305-27090420,27090507-27090575,27090684-27090758,
27090836-27090880,27091100-27091187,27091488-27091570,
27091655-27091705,27091848-27091905,27092019-27092201,
27092385-27092546,27092713-27093029
Length = 567
Score = 34.7 bits (76), Expect = 0.14
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +3
Query: 294 PKDSVLQNGSRYDFIIVGAGTAGSALAARLSEVANFSVLLLE----AGGDPPIEA-IIPA 458
P+ +L G R+D +++G G G A AA L+ A SV +LE GG E+ ++P
Sbjct: 29 PQQQLLPKGKRWDAVVIGGGHNGLAAAAYLAR-AGRSVAVLERRGVIGGAAVSESDLVPG 87
Query: 459 FR 464
FR
Sbjct: 88 FR 89
>07_03_1216 +
24940426-24940714,24940800-24940877,24941954-24942129,
24942298-24942492
Length = 245
Score = 33.1 bits (72), Expect = 0.44
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +1
Query: 346 VPVPLALRSPPDSPRLPTS 402
VP PL+LRSPP +P LPTS
Sbjct: 16 VPSPLSLRSPPKTPFLPTS 34
>05_05_0016 -
21542300-21542886,21542956-21543286,21543310-21543419,
21543526-21544069,21544190-21544345
Length = 575
Score = 32.7 bits (71), Expect = 0.58
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 416 GGGRRSTDRGYYTSVQRNSK--SKFGRLEFYQRGK 514
GG + D Y+ S+ R +K SKFGRL FY K
Sbjct: 80 GGNPHAEDFAYFHSISRYTKQNSKFGRLNFYPHSK 114
>02_03_0350 + 18027932-18028125,18028185-18028270,18028889-18028980
Length = 123
Score = 32.7 bits (71), Expect = 0.58
Identities = 24/82 (29%), Positives = 34/82 (41%)
Frame = +2
Query: 365 CARRQTLRGCQLQRTPTGGGRRSTDRGYYTSVQRNSKSKFGRLEFYQRGKQYYKPSLKKR 544
CA + T+RG + R+ T G R + RG + S + S+ GR
Sbjct: 24 CAAQPTVRGRRQWRSATMRGWRDSRRGAHASSSGGASSESGRWASNLGLAAGPSDGAVAV 83
Query: 545 NRATTSREDAGWKRLLESHGLC 610
RED G+ L ES G+C
Sbjct: 84 GALNGVREDDGYGTLFESSGVC 105
>03_02_0259 -
6920472-6920579,6920744-6921022,6921115-6921390,
6921473-6921691,6921795-6921963,6922248-6922422,
6922490-6922601,6923343-6923573
Length = 522
Score = 32.3 bits (70), Expect = 0.77
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +3
Query: 318 GSRYDFIIVGAGTAGSALAARLSE 389
G R D +IVGAG AGSALA L +
Sbjct: 54 GDRTDIVIVGAGVAGSALAYTLGK 77
>10_08_0628 +
19389508-19389637,19389774-19389850,19390332-19390438,
19390545-19390626,19390702-19390814,19391023-19391086,
19391192-19391266,19391691-19391807,19392131-19392199,
19392319-19392411,19392733-19392835,19393040-19393164,
19393317-19393366,19393477-19393543,19393663-19393742,
19394038-19394166,19394274-19394340,19394429-19394512
Length = 543
Score = 31.9 bits (69), Expect = 1.0
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Frame = +3
Query: 327 YDFIIVGAGTAGSALAARLSEV-----ANFSVLLLEAGGD 431
YD ++VGAG AG A A RL ++ + SV +LE G +
Sbjct: 3 YDVVVVGAGPAGLAAAIRLKQLCRDADTDLSVCVLEKGSE 42
>04_04_1481 - 33894175-33894537,33894618-33894739,33894841-33895225
Length = 289
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 573 LGGSGSLNHMVYARGFPSDYHEWASIAGETWNWT 674
+GG G+ H V+ GFPS++ W S A ++ T
Sbjct: 208 VGGDGAHRHAVHG-GFPSNFQRWGSAAATSYTIT 240
>09_03_0076 - 12120900-12121183,12123083-12123188
Length = 129
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 303 SVLQNGSRYDFIIVGAGTAGSALAARLSEVANFSVLLLEA 422
S++ R II+GAG +G + RLSE +L+LEA
Sbjct: 17 SLVAGTGRPRVIIIGAGISGISAGKRLSEAGITDILILEA 56
>09_04_0617 - 18981258-18981949,18983869-18984427
Length = 416
Score = 30.7 bits (66), Expect = 2.3
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +3
Query: 312 QNGSRYDFIIVGAGTAGSALAARLSEVANFSVLLLE 419
+ G +D I+VGAG GS A S VLLLE
Sbjct: 10 EGGDGFDVIVVGAGIMGSCAAYAASTRGGARVLLLE 45
>04_04_1545 -
34278266-34278586,34278685-34279114,34279225-34279322,
34279415-34279517,34279609-34279694,34279778-34279865,
34279950-34280063,34280147-34280235,34280369-34280484,
34280906-34280951
Length = 496
Score = 30.3 bits (65), Expect = 3.1
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +3
Query: 312 QNGSRYDFIIVGAGTAGSALAARLSEVANFSVLLLEA 422
QN S I++G G +G A A LS A+F V LLE+
Sbjct: 25 QNASPPSVIVIGGGISGIAAARALSN-ASFKVTLLES 60
>03_02_0260 -
6924532-6924757,6925443-6925546,6925729-6926007,
6926093-6926368,6926460-6926678,6926758-6926926,
6927208-6927382,6927489-6927600,6929566-6929820
Length = 604
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 324 RYDFIIVGAGTAGSALAARLSE 389
R D I+VGAG AGSALA L +
Sbjct: 64 RTDVIVVGAGVAGSALAYTLGK 85
>11_06_0192 +
21128298-21128829,21129341-21129407,21131169-21131211,
21131301-21131367,21131613-21131770,21131863-21132057
Length = 353
Score = 28.7 bits (61), Expect = 9.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -2
Query: 568 FPRGCCSIPLFKAWLVILFSTLVKFQSTELAFRVSLNAGIIASI 437
FP G + ++ +LFS + F + +L R + N +IA+I
Sbjct: 292 FPLGRAGMTIYGCLATVLFSAFIVFDTNQLIKRHTYNEYVIAAI 335
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,300,664
Number of Sequences: 37544
Number of extensions: 708710
Number of successful extensions: 2114
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2108
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3619930760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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