Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_N19
         (1181 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66494-4|CAA91263.1|  599|Caenorhabditis elegans Hypothetical pr...    96   5e-20
AF003384-6|AAB54238.2|  451|Caenorhabditis elegans Coenzyme q (u...    38   0.014
Z50756-1|CAA90637.2|  737|Caenorhabditis elegans Hypothetical pr...    33   0.30 
AF036705-5|AAB95172.1|  544|Caenorhabditis elegans Hypothetical ...    31   2.1  
Z81449-1|CAB03763.1|  473|Caenorhabditis elegans Hypothetical pr...    30   2.8  
D86473-1|BAA20377.1|  412|Caenorhabditis elegans 3-keto-acyl-CoA...    30   3.7  
AL023847-7|CAA19548.1|  412|Caenorhabditis elegans Hypothetical ...    30   3.7  
Z83114-2|CAB05552.1|  114|Caenorhabditis elegans Hypothetical pr...    29   4.8  
AL008866-1|CAA15509.3|  724|Caenorhabditis elegans Hypothetical ...    29   4.8  
AF036694-3|AAB88343.3|  344|Caenorhabditis elegans Hypothetical ...    29   6.4  
U00048-15|AAB53835.2|  597|Caenorhabditis elegans Lethal protein...    29   8.5  
AL110479-29|CAB60311.2| 1044|Caenorhabditis elegans Hypothetical...    29   8.5  
AF047657-4|AAK18948.3|  330|Caenorhabditis elegans Serpentine re...    29   8.5  

>Z66494-4|CAA91263.1|  599|Caenorhabditis elegans Hypothetical
           protein C34C6.4 protein.
          Length = 599

 Score = 95.9 bits (228), Expect = 5e-20
 Identities = 70/210 (33%), Positives = 100/210 (47%), Gaps = 5/210 (2%)
 Frame = +3

Query: 336 IIVGAGTAGSALAARLSEVANFSVLLLEAGG-DPPIEAII---PAFRETLKASSVDWNF- 500
           IIVGAG+AG  LA RL+E  +  VLL+EAG  D   +  I    A    L + + +W++ 
Sbjct: 41  IIVGAGSAGCVLANRLTEDPSNRVLLIEAGPVDHKWDWRIHMPAALMYNLCSDTYNWHYH 100

Query: 501 TSVENNITSQALKRGIEQQPRGKMLGGSGSLNHMVYARGFPSDYHEWASIAGETWNWTNV 680
           T+ + N+ ++         PRG++ GGS +LN M Y RG   DY+ W       WN+ N 
Sbjct: 101 TTAQKNLGNRVF-----YWPRGRVWGGSSTLNAMCYVRGHAYDYNRWEKEGASGWNYANC 155

Query: 681 LKYFMKTEHMTDTNIVNNPELMVYHGRGGAIEVSGTNEVMFSIKKFLQAFEELGFKTVPD 860
           L YF K E  +D    N+P    Y G  G + V   +      K +L   +E       D
Sbjct: 156 LPYFKKAETYSDATGPNDP----YRGNNGPLYVKKGDAENPLHKAWLNVGKEHPLGWTND 211

Query: 861 MTYPNSIGAGCFSHTIRNGERDSSLRALLN 950
           M      G      TI NGER S+ +A ++
Sbjct: 212 MNGEKQEGISTMDMTIHNGERWSASKAYVH 241


>AF003384-6|AAB54238.2|  451|Caenorhabditis elegans Coenzyme q
           (ubiquinone) biosynthesisprotein 6 protein.
          Length = 451

 Score = 37.9 bits (84), Expect = 0.014
 Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
 Frame = +3

Query: 321 SRYDFIIVGAGTAGSALAARLSEVANF---SVLLLEAGGDPPIEAIIP 455
           S YD +IVG G  G+A+A  L    +F   SVLLL+AG  P + +  P
Sbjct: 16  SYYDTVIVGGGMVGNAMACSLGANKSFQSKSVLLLDAGRSPSLASFKP 63


>Z50756-1|CAA90637.2|  737|Caenorhabditis elegans Hypothetical
           protein T08D10.2 protein.
          Length = 737

 Score = 33.5 bits (73), Expect = 0.30
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +3

Query: 279 VGETWPKDSVLQNGSRYDFIIVGAGTAGSALAARLSEVANFSVLLLEAGG 428
           +G  +PK  ++ N  +   +++GAG AG A A +L     F V ++EA G
Sbjct: 159 IGFFFPKTELVNNMEKKFVVVIGAGAAGIAAATQLL-TFGFDVAVVEASG 207


>AF036705-5|AAB95172.1|  544|Caenorhabditis elegans Hypothetical
           protein F37C4.6 protein.
          Length = 544

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
 Frame = +3

Query: 327 YDFIIVGAGTAGSALAARLSEVANFSVLLLE----AGGDPPIEAIIPAFR 464
           YD II+G G  G   AA L++ A   V +LE     GG    E I+P FR
Sbjct: 15  YDAIIIGGGHNGLTAAAYLTK-AGKKVCVLERRHVVGGAAVTEEIVPGFR 63


>Z81449-1|CAB03763.1|  473|Caenorhabditis elegans Hypothetical
           protein C46F11.2a protein.
          Length = 473

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +3

Query: 303 SVLQNGSRYDFIIVGAGTAGSALAARLSEVANFSVLLLEAG 425
           S++     +D++++G G+ G A A R  E    SV L+E+G
Sbjct: 13  SIMSGVKEFDYLVIGGGSGGIASARRAREF-GVSVGLIESG 52


>D86473-1|BAA20377.1|  412|Caenorhabditis elegans 3-keto-acyl-CoA
           thiolase protein.
          Length = 412

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 24/85 (28%), Positives = 41/85 (48%)
 Frame = +3

Query: 348 AGTAGSALAARLSEVANFSVLLLEAGGDPPIEAIIPAFRETLKASSVDWNFTSVENNITS 527
           +G++G  L  ++ E  N  V+L  AG     E + P   E L A+ +D    SV+ +I+ 
Sbjct: 89  SGSSGLFLGKQIIESGNSDVVLC-AG----FERMAPGSLENL-AAPIDDRALSVDKHISV 142

Query: 528 QALKRGIEQQPRGKMLGGSGSLNHM 602
            +   G+E  P    + G+ +  HM
Sbjct: 143 MSETYGLEPAPMTAQMFGNAAKEHM 167


>AL023847-7|CAA19548.1|  412|Caenorhabditis elegans Hypothetical
           protein Y57A10C.6 protein.
          Length = 412

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 24/85 (28%), Positives = 41/85 (48%)
 Frame = +3

Query: 348 AGTAGSALAARLSEVANFSVLLLEAGGDPPIEAIIPAFRETLKASSVDWNFTSVENNITS 527
           +G++G  L  ++ E  N  V+L  AG     E + P   E L A+ +D    SV+ +I+ 
Sbjct: 89  SGSSGLFLGKQIIESGNSDVVLC-AG----FERMAPGSLENL-AAPIDDRALSVDKHISV 142

Query: 528 QALKRGIEQQPRGKMLGGSGSLNHM 602
            +   G+E  P    + G+ +  HM
Sbjct: 143 MSETYGLEPAPMTAQMFGNAAKEHM 167


>Z83114-2|CAB05552.1|  114|Caenorhabditis elegans Hypothetical
           protein K09B11.3 protein.
          Length = 114

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 578 WKRLLESHGLCQGFSFRLPRM 640
           W RLLE   LC GF  R  R+
Sbjct: 30  WDRLLEERSLCDGFELRYERL 50


>AL008866-1|CAA15509.3|  724|Caenorhabditis elegans Hypothetical
           protein B0019.1 protein.
          Length = 724

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 327 YDFIIVGAGTAGSALAARLSE-VANFSVLLLEAGG 428
           YD I+VGAG  G   A  + +     SVL+LEA G
Sbjct: 46  YDVIVVGAGLTGLTAARNIQQNRPGLSVLVLEARG 80


>AF036694-3|AAB88343.3|  344|Caenorhabditis elegans Hypothetical
           protein CD4.5 protein.
          Length = 344

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
 Frame = -1

Query: 950 VKESPQRAVA---FAISDG-VRKTSCTDRVWVSHIRNCLETKFLERL*KFLNGEHNFIR- 786
           V ESP+ +++   + I D  +R  S   +V + +  NC       R   F  GE   I  
Sbjct: 243 VAESPKFSLSHDSYLIFDVYIRSVSPKLKVCIDNFENCPYNSPQLRKDAFWRGEQKLILK 302

Query: 785 --SRNFYSTSSTVVHHQFWIVNNVRI 714
             SR  +  +  V  HQF  ++N+R+
Sbjct: 303 EGSRKIFFVAENVKKHQFLAIDNIRL 328


>U00048-15|AAB53835.2|  597|Caenorhabditis elegans Lethal protein
           721 protein.
          Length = 597

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 291 WPKDSVLQNGSRYDFIIVGAGTAGSALAARLSEVA 395
           W    + +    YD +IVG G +G + A RL ++A
Sbjct: 39  WKDVDLARESDVYDVVIVGGGPSGLSAAIRLRQLA 73


>AL110479-29|CAB60311.2| 1044|Caenorhabditis elegans Hypothetical
           protein Y105C5B.2 protein.
          Length = 1044

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 15/63 (23%), Positives = 30/63 (47%)
 Frame = -2

Query: 847 LKPSSSNACRNFLMENITSFVPETSIAPPRPWYTINSGLLTMFVSVMCSVFMKYLSTLVQ 668
           +KP  S+ C   + +N   F+P + +    P YT + G    + + +CS F  ++   + 
Sbjct: 361 VKPRESDYCGGNMTKNCYEFLPSSPLLEDLPPYTSDCG----YDNNLCSDFHVFMIAAIV 416

Query: 667 FQV 659
           F +
Sbjct: 417 FSI 419


>AF047657-4|AAK18948.3|  330|Caenorhabditis elegans Serpentine
           receptor, class h protein240 protein.
          Length = 330

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = +3

Query: 594 NHMVYARGFPSDYHEWASIAGETWNWTNVLKYFMKTEHMTDTNIVNNPELMVY 752
           NHM+  +    + H W+S++     +  V   F+      D  ++NNP L +Y
Sbjct: 45  NHMLTVKWLLFNTHIWSSLSDFVICFMTVPYLFLPALAGYDLGLINNPGLSIY 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,278,619
Number of Sequences: 27780
Number of extensions: 546279
Number of successful extensions: 1381
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1380
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3234681980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)