BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_N16
(1179 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 38 0.020
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 32 1.0
01_03_0005 + 11568545-11569119,11569179-11569191 32 1.0
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 31 1.3
03_05_0630 + 26260159-26260272,26260520-26260894 31 1.3
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 31 1.3
09_02_0603 - 11150739-11150746,11150791-11151340 31 1.8
07_03_1136 + 24218601-24218734,24218769-24219906 31 1.8
06_01_0178 + 1386981-1387505 31 1.8
03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776 31 1.8
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 31 1.8
09_03_0145 - 12749288-12751510 30 3.1
06_03_1172 - 28147957-28148274,28149362-28149877 30 3.1
05_05_0175 + 22966151-22967614 30 3.1
02_04_0028 + 19027510-19027983,19028087-19028278,19028369-190285... 30 3.1
11_01_0288 + 2151552-2151581,2151818-2151893,2152019-2153460 30 4.1
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 30 4.1
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 4.1
07_03_0600 + 19866757-19867218,19867920-19868429 30 4.1
03_06_0338 + 33240111-33240860,33241248-33241536,33242494-33242621 30 4.1
12_02_0072 + 13218669-13218706,13218715-13218781,13220400-132204... 29 5.4
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 29 5.4
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646... 29 5.4
02_05_0149 + 26290236-26290880 29 5.4
02_01_0003 + 13079-13610,14005-14312,14364-14549,14620-14707,148... 29 5.4
12_01_0292 + 2193309-2193338,2193565-2193640,2193744-2195203,219... 29 7.1
09_06_0374 + 22649455-22650024,22650085-22650637,22650812-226511... 29 7.1
07_03_0560 + 19479597-19480667 29 7.1
09_02_0495 + 9880714-9881196 29 9.4
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 9.4
01_01_0083 + 631196-631675 29 9.4
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 37.5 bits (83), Expect = 0.020
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = +2
Query: 959 PPPXKXKKXXPXXXGGGTPXGEXXKTXGXPPXKXPRGPPXXXXPXXXKXKXXPPXXPPGE 1138
PPP K P G P K G PP P+GP P K PP PP
Sbjct: 327 PPPPPPKAAPPPPPPKGPPPPPPAK--GPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKG 384
Query: 1139 G 1141
G
Sbjct: 385 G 385
Score = 36.3 bits (80), Expect = 0.047
Identities = 25/75 (33%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Frame = +3
Query: 957 PPPXKKXKKXXPXXXG--GXPPXGKXKKXGXSPXEKXPGXPPXXXXPXXXKXKXXPPXPP 1130
PPP K P PP K P K P PP P PP PP
Sbjct: 316 PPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGP-----SPPPPPPP 370
Query: 1131 XGKGGGXFXXXPXGG 1175
GK GG P GG
Sbjct: 371 GGKKGGPPPPPPKGG 385
Score = 32.7 bits (71), Expect = 0.58
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = +2
Query: 950 KRAPPPXKXKKXXPXXXGGGTPXGEXXKTXGXPPXKXPRGPPXXXXPXXXKXKXXPPXXP 1129
K APPP K P G P K PP P G P K P
Sbjct: 333 KAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPPAA 392
Query: 1130 PG 1135
PG
Sbjct: 393 PG 394
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -1
Query: 867 PPFXXKPXXPPXGXXXPPPPPXXXGXXFFXXXXXXGPQKXXPXPPG 730
PP K PP PPPPP G GP P PPG
Sbjct: 328 PPPPPKAAPPPPPPKGPPPPPPAKGPP--PPPPPKGPSPPPPPPPG 371
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 31.9 bits (69), Expect = 1.0
Identities = 24/84 (28%), Positives = 26/84 (30%), Gaps = 5/84 (5%)
Frame = -2
Query: 959 GPFXXXPPPPXLFXXXPLXXXLXXNFFSXXPPXFXGNPFXPLXGXXTPPPPPXXXGXGFF 780
G + PPPP + P PP P L G PP PP G G
Sbjct: 1093 GDYGVAPPPPSIGAGAPPPPPPPGGITGVPPPP----PIGGLGGHQAPPAPPLPEGIGGV 1148
Query: 779 -----XGGXXRXPKXXPPXPXGGG 723
GG P PP GG
Sbjct: 1149 PPPPPVGGLGGPPAPPPPAGFRGG 1172
Score = 28.7 bits (61), Expect = 9.4
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = +1
Query: 724 PPPXGXGGXFLGXLXXPPXKKPXPXXXGGGGGVXXPXRGXXGFPXKXGG 870
PPP G +G PP P G GG P G G P GG
Sbjct: 1185 PPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGG-PPPPPGGRGLPAPPGG 1232
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 31.9 bits (69), Expect = 1.0
Identities = 26/98 (26%), Positives = 30/98 (30%)
Frame = +3
Query: 723 PPXXGXXGXXFGXPXXSPXKKTXXPGXXGGGGGXXXXKGGKXVSXKXGGXPXKKIXXKGX 902
PP G G + + P GGGGG GG GG G
Sbjct: 71 PPPSYPSGGGGGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGG---------GG 121
Query: 903 XKGXXXKKXGGGGXXXKGPPPXKKXKKXXPXXXGGXPP 1016
G ++ GGGG PPP P PP
Sbjct: 122 GGGGGWQQGGGGGGAYPTPPPPNPFLPYFPFYYYSPPP 159
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -1
Query: 888 KFFFXXSPPFXXKPXXPPXGXXXPPPPPXXXG 793
+F F PP +P PP PPPPP G
Sbjct: 69 QFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYG 100
Score = 30.3 bits (65), Expect = 3.1
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -2
Query: 971 FXGGGPFXXXPPPPXLFXXXPLXXXLXXNFFSXXPPXFXGNPFXPLXGXXTPPPPP 804
F G P PPPP P S PP P P PPPPP
Sbjct: 72 FGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPP 127
Score = 29.9 bits (64), Expect = 4.1
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = -2
Query: 980 FXFFXGGGPFXXXPPPPXLFXXXPLXXXLXXNFFSXXPPXFXGNPFXPLXGXXTPPPPP 804
F F G PPPP ++ P S PP P P PPPPP
Sbjct: 70 FNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPP 128
Score = 28.7 bits (61), Expect = 9.4
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -1
Query: 867 PPFXXKPXXPPXGXXXPPPPPXXXGXXFFXXXXXXGPQKXXPXPP 733
PPF P PP G PPPP F PQ+ P PP
Sbjct: 49 PPFLAPPPPPPPG----PPPPHQPQFNF----GPGPPQQQQPPPP 85
>03_05_0630 + 26260159-26260272,26260520-26260894
Length = 162
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +3
Query: 798 GXXGGGGGXXXXKGGKXVSXKXGGXPXKKIXXKGXXKGXXXKKXGGGG 941
G GGGGG +GG GG ++ G G + GGGG
Sbjct: 95 GYGGGGGGYGGGRGGGGYGGGGGGGYGRREGGYGGGGGYGGGRGGGGG 142
>01_03_0117 + 12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 31.5 bits (68), Expect = 1.3
Identities = 17/63 (26%), Positives = 18/63 (28%)
Frame = +3
Query: 960 PPXKKXKKXXPXXXGGXPPXGKXKKXGXSPXEKXPGXPPXXXXPXXXKXKXXPPXPPXGK 1139
P K P PP +P P PP P PP P G
Sbjct: 257 PATKPPPSFPPQLAPTMPPPAHAPAETPAPPTTPPALPPATTAPSPKNSSSSPPPPCTGG 316
Query: 1140 GGG 1148
GGG
Sbjct: 317 GGG 319
>09_02_0603 - 11150739-11150746,11150791-11151340
Length = 185
Score = 31.1 bits (67), Expect = 1.8
Identities = 20/52 (38%), Positives = 21/52 (40%)
Frame = -2
Query: 881 FSXXPPXFXGNPFXPLXGXXTPPPPPXXXGXGFFXGGXXRXPKXXPPXPXGG 726
F PP G+ F PL PPPPP G F R P PP P G
Sbjct: 41 FGFPPPPPPGSTFVPLPQSGVPPPPP--LGSFFVPPPQSRVP---PPPPQLG 87
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 31.1 bits (67), Expect = 1.8
Identities = 32/129 (24%), Positives = 34/129 (26%)
Frame = +3
Query: 762 PXXSPXKKTXXPGXXGGGGGXXXXKGGKXVSXKXGGXPXKKIXXKGXXKGXXXKKXGGGG 941
P P K P GG G G + GG P G G GGGG
Sbjct: 80 PRPLPIKLLGLPPGGGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGG 139
Query: 942 XXXKGPPPXKKXKKXXPXXXGGXPPXGKXKKXGXSPXEKXPGXPPXXXXPXXXKXKXXPP 1121
G P P G+ G P G P P P
Sbjct: 140 GG--GAPRRVLGGGGGGGALARPPGGGRGGALGRPPGGGGGGGGP-GRAPGGGGGGGGPG 196
Query: 1122 XPPXGKGGG 1148
P G GGG
Sbjct: 197 RAPGGGGGG 205
>06_01_0178 + 1386981-1387505
Length = 174
Score = 31.1 bits (67), Expect = 1.8
Identities = 26/83 (31%), Positives = 28/83 (33%)
Frame = +3
Query: 798 GXXGGGGGXXXXKGGKXVSXKXGGXPXKKIXXKGXXKGXXXKKXGGGGXXXKGPPPXKKX 977
G GGGGG KGGK + GG G KG G GG G K
Sbjct: 45 GGGGGGGGGAGGKGGKGGAGGHGGAGGG--GGGGGGKGRKGGAGGHGGAGGGGGGGGGKG 102
Query: 978 KKXXPXXXGGXPPXGKXKKXGXS 1046
+K GG G G S
Sbjct: 103 RKGGRGGDGGSGGAGGRGGDGGS 125
>03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776
Length = 429
Score = 31.1 bits (67), Expect = 1.8
Identities = 25/82 (30%), Positives = 26/82 (31%)
Frame = -2
Query: 1175 TPPXXXXKXPPPLPXGGXXGXXFXFXXPXXXXXXGXPGGFFXGGXPXXXXXXXXXXXXPX 996
TPP PPPLP G P G PG F+ P P
Sbjct: 196 TPPPTPRGFPPPLPSPGAGAPRGGSATP--AMIPGHPGAFYPFPPP------SLPGVGPP 247
Query: 995 XGGXFFXFFXGGGPFXXXPPPP 930
GG G PF PPPP
Sbjct: 248 RGGGAIPGLPAGFPFLLRPPPP 269
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 31.1 bits (67), Expect = 1.8
Identities = 22/66 (33%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +3
Query: 954 GPPPXKKXKKXXPXXXGGXPPXGKXKKXGXSPXEKXPGXPPXXXXP-XXXKXKXXPPXP- 1127
GP P K K P K K G P PG P P K K PP P
Sbjct: 156 GPKPGPKPKPKPSPPKPKPGPKPKPPKPGPKPKPPKPGPKPKPKPPKPGPKPKPKPPKPG 215
Query: 1128 PXGKGG 1145
P K G
Sbjct: 216 PKPKPG 221
>09_03_0145 - 12749288-12751510
Length = 740
Score = 30.3 bits (65), Expect = 3.1
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = -2
Query: 848 PFXPLXGXXTPPPPPXXXGXGFFXGGXXRXPKXXPPXPXGGG 723
PF P +PPPPP G P PP P GG
Sbjct: 20 PFKPKPTNPSPPPPPPPPGIQPPPPALPGMPHGRPPPPFPGG 61
>06_03_1172 - 28147957-28148274,28149362-28149877
Length = 277
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/54 (29%), Positives = 20/54 (37%)
Frame = -2
Query: 965 GGGPFXXXPPPPXLFXXXPLXXXLXXNFFSXXPPXFXGNPFXPLXGXXTPPPPP 804
GG P P PP ++ P F PP P+ P +PPP P
Sbjct: 8 GGAPPPPPPSPPSVYPFLP-----PATFIPPPPPAATAEPYAPPSLIISPPPSP 56
>05_05_0175 + 22966151-22967614
Length = 487
Score = 30.3 bits (65), Expect = 3.1
Identities = 15/53 (28%), Positives = 18/53 (33%)
Frame = +3
Query: 990 PXXXGGXPPXGKXKKXGXSPXEKXPGXPPXXXXPXXXKXKXXPPXPPXGKGGG 1148
P PP + E PG P + PP PP G+GGG
Sbjct: 101 PGAPPSSPPLSPQRTHVPFSWESSPGVPKDAACGRKVVREVLPPRPPPGRGGG 153
>02_04_0028 + 19027510-19027983,19028087-19028278,19028369-19028545,
19029568-19029663,19030487-19030618,19030950-19031008,
19031234-19031321,19031433-19031693
Length = 492
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +2
Query: 1004 GGTPXGEXXKTXGXPPXKXPRGPPXXXXPXXXKXKXXPPXXPPGEGGG 1147
GG + G + PR PP P PP PGEGGG
Sbjct: 76 GGASTAAAAQGGGSAASRPPR-PPRPPLPPRPPRPPLPPLREPGEGGG 122
>11_01_0288 + 2151552-2151581,2151818-2151893,2152019-2153460
Length = 515
Score = 29.9 bits (64), Expect = 4.1
Identities = 22/78 (28%), Positives = 25/78 (32%), Gaps = 2/78 (2%)
Frame = +3
Query: 798 GXXGGGGGXXXXKGG--KXVSXKXGGXPXKKIXXKGXXKGXXXKKXGGGGXXXKGPPPXK 971
G GGG G KGG + + G G + GGGG G P
Sbjct: 257 GNNGGGAGNGGKKGGGGNEIPVQIKGNANNAAGG-GKKDSGAKQNQGGGGKNGGGQPNNA 315
Query: 972 KXKKXXPXXXGGXPPXGK 1025
K P G P GK
Sbjct: 316 KGGGGAPNGGGNHPAQGK 333
>10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/59 (25%), Positives = 18/59 (30%)
Frame = +2
Query: 956 APPPXKXKKXXPXXXGGGTPXGEXXKTXGXPPXKXPRGPPXXXXPXXXKXKXXPPXXPP 1132
APP + ++ P E K PP P PP P P PP
Sbjct: 293 APPAPRSRRTPPRTRFSAGSGAEMNKQMASPPSNPPPAPPPPPPPPSRFNNTTPKPPPP 351
>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.9 bits (64), Expect = 4.1
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = +2
Query: 956 APPPXKXKKXXPXXXGGGTPXGEXXKTXGXPPXKXPRGPPXXXXPXXXKXKXXPPXXPP 1132
APPP P TP G + G PP P PP PP PP
Sbjct: 664 APPPPPP----PPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPGVPSAPPPPPPP 718
>07_03_0600 + 19866757-19867218,19867920-19868429
Length = 323
Score = 29.9 bits (64), Expect = 4.1
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = -1
Query: 897 PXXKFFFXXSPPFXXKPXXPPXGXXXPPPPP 805
P ++ PP P PP PPPPP
Sbjct: 48 PLPPHYYQAGPPHAPPPQQPPAMWGQPPPPP 78
>03_06_0338 + 33240111-33240860,33241248-33241536,33242494-33242621
Length = 388
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = -2
Query: 941 PPPPXLFXXXPLXXXLXXNFFSXXPPXFXGNPFXPLXGXXTPPPPP 804
PPPP L P + GNP PL +P PPP
Sbjct: 196 PPPPPLEKDAPPQPPRPQEVHHRPTKSYTGNPPQPLEKDASPQPPP 241
>12_02_0072 + 13218669-13218706,13218715-13218781,13220400-13220471,
13222107-13222182,13222309-13222943
Length = 295
Score = 29.5 bits (63), Expect = 5.4
Identities = 37/136 (27%), Positives = 40/136 (29%), Gaps = 13/136 (9%)
Frame = +3
Query: 762 PXXSPXKKTXXPGXXGGGGGXXXXKGGKXVSXKXG-----GXPXKKIXXKGXXKGXXXKK 926
P KK GGGGG +GG + G G K+ G K KK
Sbjct: 131 PEKKEEKKEEAKKDAGGGGGDGKKEGGDGKKEEGGDGKKEGEGKKEGDGGGDKKEGEGKK 190
Query: 927 XG-GGGXXXKGPPPXKK---XKKXXPXXXGGXPPXGKXKKXGXSPXEKXP----GXPPXX 1082
G GGG G KK K GG G KK P PP
Sbjct: 191 EGDGGGDKKDGNGDGKKEGDAKAAKKEEGGGGGGDGGGKKPAAVAPMPMPMPLHHLPPQY 250
Query: 1083 XXPXXXKXKXXPPXPP 1130
PP PP
Sbjct: 251 FNMEYMNQYHRPPPPP 266
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 29.5 bits (63), Expect = 5.4
Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Frame = -2
Query: 956 PFXXXPPPPXLFXXXPLXXXLXXNFFSXXPPXFXG---NPFXPLXGXXTPPP 810
P+ PPPP P+ + S PP NP P G TPPP
Sbjct: 418 PYMGAPPPPPPGSYAPVPWGQPPPYASYPPPPPGSSMYNPPPPAPGQATPPP 469
>04_03_0660 +
18463011-18463322,18463424-18463516,18464500-18464607,
18464892-18465044,18465256-18465354,18465443-18465571,
18465987-18466166,18466208-18466246,18466247-18466363,
18466445-18466609
Length = 464
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 870 SPPFXXKPXXPPXGXXXPPPPPXXXG 793
SPP P PP PPPPP G
Sbjct: 48 SPPRPPPPPPPPTQPAPPPPPPARSG 73
>02_05_0149 + 26290236-26290880
Length = 214
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = +3
Query: 795 PGXXGGGGGXXXXKGGKXVSXKXGGXPXKKIXXKGXXKGXXXKKXGGGG 941
PG GGGGG GG+ GG I G G + GGGG
Sbjct: 127 PGGFGGGGGGGGGGGGRNYGGGSGG-----IGGYGNYGGGYNGEPGGGG 170
>02_01_0003 + 13079-13610,14005-14312,14364-14549,14620-14707,
14807-14887,14980-15044,15357-15497,15578-15694,
15995-16237,16326-16383,18127-18224
Length = 638
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -1
Query: 1134 PGGXXGGXFFXFXXXGXXXXGGPRGXFXGGXPXVF 1030
PGG GG F G G P G F GG P F
Sbjct: 533 PGGMPGGGFPGGMPGGGFPGGMPGGGFPGGMPGGF 567
>12_01_0292 +
2193309-2193338,2193565-2193640,2193744-2195203,
2195479-2195505,2195794-2196024,2196523-2196692,
2197278-2197421,2198036-2198083,2198503-2198566
Length = 749
Score = 29.1 bits (62), Expect = 7.1
Identities = 18/50 (36%), Positives = 21/50 (42%)
Frame = +3
Query: 807 GGGGGXXXXKGGKXVSXKXGGXPXKKIXXKGXXKGXXXKKXGGGGXXXKG 956
GGG G GG+ + K GG P G KK GGGG +G
Sbjct: 294 GGGNGKNGGGGGQPNNAKGGGAP-----NGGGNHPAQGKKGGGGGGGGQG 338
>09_06_0374 + 22649455-22650024,22650085-22650637,22650812-22651147,
22651171-22652605,22652939-22653062
Length = 1005
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/61 (24%), Positives = 22/61 (36%)
Frame = +2
Query: 956 APPPXKXKKXXPXXXGGGTPXGEXXKTXGXPPXKXPRGPPXXXXPXXXKXKXXPPXXPPG 1135
+P + + P GG GE + P + PR PP P + P PG
Sbjct: 386 SPASLRPRIRRPQRPSGGNLTGERPRIAYGKPRRPPRRPPGLARPRKPLGRRPPGPARPG 445
Query: 1136 E 1138
+
Sbjct: 446 K 446
>07_03_0560 + 19479597-19480667
Length = 356
Score = 29.1 bits (62), Expect = 7.1
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +3
Query: 798 GXXGGGGGXXXXKGGKXVSXKXGGXPXKKIXXKGXXKGXXXKKXGGGGXXXKG 956
G GGGGG GGK GG G G GGGG G
Sbjct: 207 GMGGGGGGGFGGGGGKGGGFGAGGGMGGGAGGGGGLGGGGGGGMGGGGGGGMG 259
>09_02_0495 + 9880714-9881196
Length = 160
Score = 28.7 bits (61), Expect = 9.4
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
Frame = -2
Query: 836 LXGXXTPPPPPXXXGXGF---FXGGXXRXPKXXPPXP 735
L G PPPPP F F GG P PP P
Sbjct: 74 LFGGTYPPPPPGVMPGAFAPPFGGGFPYGPAPPPPNP 110
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 28.7 bits (61), Expect = 9.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 870 SPPFXXKPXXPPXGXXXPPPPP 805
SPP P PP PPPPP
Sbjct: 1163 SPPPATPPPPPPLSPSLPPPPP 1184
>01_01_0083 + 631196-631675
Length = 159
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 724 PPPXGXGGXFLGXLXXPPXKKPXPXXXGGGGGVXXP 831
PPP G GG ++ P +P GGGGG P
Sbjct: 78 PPPQGGGGGYI------PYYQPPAGGGGGGGGFNYP 107
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.312 0.151 0.504
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,441,653
Number of Sequences: 37544
Number of extensions: 527206
Number of successful extensions: 2903
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2310
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3608253564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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