Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_N15
         (1226 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    27   0.85 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   4.5  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   6.0  
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    25   6.0  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 27.5 bits (58), Expect = 0.85
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = +1

Query: 373 GGRCGRXXXGXGXGXPPGKGGXPXGXPXG 459
           GGR GR   G G G   G+GG   G   G
Sbjct: 67  GGRGGRGGRGGGRGRGRGRGGRDGGGGFG 95



 Score = 26.6 bits (56), Expect = 1.5
 Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
 Frame = -2

Query: 1189 GXXGGXXXXWGGGXRGFXXG-GGXPKRGSXFFXXRGGG 1079
            G  GG    +GGG RG   G GG   RG       GGG
Sbjct: 55   GGYGGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGG 92


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.0 bits (52), Expect = 4.5
 Identities = 13/36 (36%), Positives = 13/36 (36%)
 Frame = -1

Query: 524 LGGGGAXXXXXXGGGXGXLXXEPXGXPXGXPPXPGG 417
           LGGG        GGG G       G   G P   GG
Sbjct: 671 LGGGAVGGGSGAGGGAGSSGGSGGGLASGSPYGGGG 706


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 11/24 (45%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
 Frame = +2

Query: 476 PXPPPXXXXXXPPPP-QGGXXGXP 544
           P PPP      PP P  GG  G P
Sbjct: 583 PAPPPPPPMGPPPSPLAGGPLGGP 606


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
            protein protein.
          Length = 324

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +2

Query: 1070 GGGPPXPXSKKXGXPFXGPPPXXKTPXXPP 1159
            GGGPP    ++       PPP  +    PP
Sbjct: 192  GGGPPGVTQQQPNMMHQQPPPLHQGQQAPP 221


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.313    0.150    0.529 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 731,505
Number of Sequences: 2352
Number of extensions: 14910
Number of successful extensions: 48
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 139791474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)