Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_N12
         (1149 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68318-1|CAA92691.1|  285|Caenorhabditis elegans Hypothetical pr...    77   3e-14
Z92832-6|CAB07375.2|  572|Caenorhabditis elegans Hypothetical pr...    31   1.2  
U23519-12|AAK31505.3| 1021|Caenorhabditis elegans Hypothetical p...    31   2.0  
AC024880-2|AAF60914.4|  665|Caenorhabditis elegans Hypothetical ...    29   6.2  
AC024880-1|AAR12985.1|  634|Caenorhabditis elegans Hypothetical ...    29   6.2  

>Z68318-1|CAA92691.1|  285|Caenorhabditis elegans Hypothetical
           protein T21B10.1 protein.
          Length = 285

 Score = 76.6 bits (180), Expect = 3e-14
 Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 14/201 (6%)
 Frame = +3

Query: 132 EMFRNVLLPLR-RGSFQVTSIRQAQKKYPKADKKVQAA-AESLAARGFLRPTKSWDPPTN 305
           E  R  L  +R R S QVT+   +  ++      +     +++ ARGFL+ T+++ P  +
Sbjct: 38  ESLRKTLPSIRARESTQVTASADSVTEFDDDLLTMSRIDTDAIRARGFLKYTQNYVPGVD 97

Query: 306 INETILKICATCGLNGNSEFEALD----------TKFTVLKACYEETGHSVPNSLXHTIE 455
           +   +L+  ++C  +   + E +D           KF +L    +   H   N     +E
Sbjct: 98  VKNQVLEAASSCLRSAGVKSENVDQYKFVEGDNSVKFELLNRLGKSIEHWPTNGKLLHLE 157

Query: 456 TVDDLTEFYKTPVYTTTPF-DALKLMDLPKNLHVQKDYVRFHP-DTDTLFNGVSAFPKSS 629
           TV D+ EFY+TPV   T + +  +  + PKN+ + +   RFHP DT     G++AFP S 
Sbjct: 158 TVADVVEFYQTPVKNVTKYTEMARDENKPKNVSIMEHAARFHPEDTHMYHGGITAFPGSG 217

Query: 630 TIVTGLKARKKYEGYNAKRKW 692
             V  L+ ++    +  K++W
Sbjct: 218 GEVLSLRQKRLLRQFQPKKEW 238


>Z92832-6|CAB07375.2|  572|Caenorhabditis elegans Hypothetical
           protein F31D4.7 protein.
          Length = 572

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +3

Query: 276 PTKSWDPPTNI--NETILKICATCGLNGNSEFEALDT 380
           PTKS D  TN+   ET L++C   G N N EF   ++
Sbjct: 513 PTKSPDEVTNLVEYETALRVCEQIGDNNNEEFSEAES 549


>U23519-12|AAK31505.3| 1021|Caenorhabditis elegans Hypothetical
           protein F26G1.1 protein.
          Length = 1021

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +3

Query: 327 ICATCGLNGNSEFEALDTKFTVLKACYEETGHSVPNSLXHTIETVDDLTEF 479
           +C++  L     F  LD    ++  C E+ G    NSL H IET+ + T+F
Sbjct: 715 VCSSLSLIDFQAFTNLDQCIELIVRCREDMGLR-QNSLIHIIETLFNFTQF 764


>AC024880-2|AAF60914.4|  665|Caenorhabditis elegans Hypothetical
           protein Y97E10AR.2a protein.
          Length = 665

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
 Frame = +3

Query: 459 VDDLTEFYKTPVYTTT---PFDALKLMDLPKNLHVQKDYVRFHPDTDTLFNGVSAFPKSS 629
           V++  E  K+P  +T+   P  A  + D PK  +V ++Y R   D  T+ +    F K +
Sbjct: 259 VEEYEETTKSPTVSTSTSEPMAAAPITDAPKTENVSRNYTRIIWDRRTVRSSSEKFSKFA 318

Query: 630 TI 635
            I
Sbjct: 319 II 320


>AC024880-1|AAR12985.1|  634|Caenorhabditis elegans Hypothetical
           protein Y97E10AR.2b protein.
          Length = 634

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
 Frame = +3

Query: 459 VDDLTEFYKTPVYTTT---PFDALKLMDLPKNLHVQKDYVRFHPDTDTLFNGVSAFPKSS 629
           V++  E  K+P  +T+   P  A  + D PK  +V ++Y R   D  T+ +    F K +
Sbjct: 209 VEEYEETTKSPTVSTSTSEPMAAAPITDAPKTENVSRNYTRIIWDRRTVRSSSEKFSKFA 268

Query: 630 TI 635
            I
Sbjct: 269 II 270


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,427,902
Number of Sequences: 27780
Number of extensions: 419013
Number of successful extensions: 902
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3119902942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)