Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_N05
(1210 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12202-2|AAB08007.1| 130|Homo sapiens ribosomal protein S24 pro... 213 8e-55
U12202-1|AAB08006.1| 133|Homo sapiens ribosomal protein S24 pro... 213 8e-55
M31520-2|AAA36588.1| 133|Homo sapiens ribosomal protein S24 pro... 213 8e-55
BC071926-1|AAH71926.1| 130|Homo sapiens ribosomal protein S24 p... 213 8e-55
BC000523-1|AAH00523.1| 130|Homo sapiens ribosomal protein S24 p... 213 8e-55
AL512628-3|CAI16468.1| 133|Homo sapiens ribosomal protein S24 p... 213 8e-55
AL512628-2|CAI16467.1| 130|Homo sapiens ribosomal protein S24 p... 213 8e-55
BX537975-1|CAD97939.1| 132|Homo sapiens hypothetical protein pr... 212 2e-54
BC004173-1|AAH04173.1| 1500|Homo sapiens ANKRD17 protein protein. 35 0.68
BC130280-1|AAI30281.1| 1621|Homo sapiens ABCA8 protein protein. 31 8.4
AB231746-1|BAE17134.1| 567|Homo sapiens hypothetical protein pr... 31 8.4
AB020629-1|BAA74845.2| 1591|Homo sapiens KIAA0822 protein protein. 31 8.4
>U12202-2|AAB08007.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 213 bits (521), Expect = 8e-55
Identities = 99/117 (84%), Positives = 107/117 (91%)
Frame = +2
Query: 107 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 286
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 287 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 457
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>U12202-1|AAB08006.1| 133|Homo sapiens ribosomal protein S24
protein.
Length = 133
Score = 213 bits (521), Expect = 8e-55
Identities = 99/117 (84%), Positives = 107/117 (91%)
Frame = +2
Query: 107 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 286
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 287 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 457
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>M31520-2|AAA36588.1| 133|Homo sapiens ribosomal protein S24
protein.
Length = 133
Score = 213 bits (521), Expect = 8e-55
Identities = 99/117 (84%), Positives = 107/117 (91%)
Frame = +2
Query: 107 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 286
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 287 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 457
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>BC071926-1|AAH71926.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 213 bits (521), Expect = 8e-55
Identities = 99/117 (84%), Positives = 107/117 (91%)
Frame = +2
Query: 107 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 286
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 287 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 457
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>BC000523-1|AAH00523.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 213 bits (521), Expect = 8e-55
Identities = 99/117 (84%), Positives = 107/117 (91%)
Frame = +2
Query: 107 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 286
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 287 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 457
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>AL512628-3|CAI16468.1| 133|Homo sapiens ribosomal protein S24
protein.
Length = 133
Score = 213 bits (521), Expect = 8e-55
Identities = 99/117 (84%), Positives = 107/117 (91%)
Frame = +2
Query: 107 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 286
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 287 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 457
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>AL512628-2|CAI16467.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 213 bits (521), Expect = 8e-55
Identities = 99/117 (84%), Positives = 107/117 (91%)
Frame = +2
Query: 107 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 286
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 287 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 457
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>BX537975-1|CAD97939.1| 132|Homo sapiens hypothetical protein
protein.
Length = 132
Score = 212 bits (517), Expect = 2e-54
Identities = 98/117 (83%), Positives = 107/117 (91%)
Frame = +2
Query: 107 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 286
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 287 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 457
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +R+QRKERKNRMKKVRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSREQRKERKNRMKKVRGT 120
>BC004173-1|AAH04173.1| 1500|Homo sapiens ANKRD17 protein protein.
Length = 1500
Score = 34.7 bits (76), Expect = 0.68
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +2
Query: 314 ALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 445
+++ + LDL K E RLA EKK+ +K++K++K + KK
Sbjct: 1457 SILLEELDLEKLREESRRLALAAKREKKKKKKKKKKKKKKKKKK 1500
>BC130280-1|AAI30281.1| 1621|Homo sapiens ABCA8 protein protein.
Length = 1621
Score = 31.1 bits (67), Expect = 8.4
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 498 SHHFLEAAPTLDFLVPRTFFILFLRSLRCL 409
S ++ P L FL+P FI+FL +LRCL
Sbjct: 1191 SEERMDVQPFLVFLIPFLHFIIFLFTLRCL 1220
>AB231746-1|BAE17134.1| 567|Homo sapiens hypothetical protein
protein.
Length = 567
Score = 31.1 bits (67), Expect = 8.4
Identities = 24/78 (30%), Positives = 38/78 (48%)
Frame = -1
Query: 442 LHSVLTFFTLFARGPLLLVQAVAG*PVLGLELLGQIECVVDQSESS*FATSEVCLETEYE 263
+HS+ T AR + AV+ L+ +G+IE ++ + S A +E CL+ E E
Sbjct: 103 VHSMSVRLTCHARSMVSEYSAVSR---NSLKEMGEIEKLLMEKCSELSAVTERCLQVENE 159
Query: 262 HYIGSNLVHFGELLTDLG 209
H + S E L+ LG
Sbjct: 160 HVLKSTKACVSETLSMLG 177
>AB020629-1|BAA74845.2| 1591|Homo sapiens KIAA0822 protein protein.
Length = 1591
Score = 31.1 bits (67), Expect = 8.4
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 498 SHHFLEAAPTLDFLVPRTFFILFLRSLRCL 409
S ++ P L FL+P FI+FL +LRCL
Sbjct: 1161 SEERMDVQPFLVFLIPFLHFIIFLFTLRCL 1190
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,779,045
Number of Sequences: 237096
Number of extensions: 2094560
Number of successful extensions: 15071
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12943
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17064331300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -