Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_N03
         (1250 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL008867-2|CAE17750.1|  763|Caenorhabditis elegans Hypothetical ...    30   3.9  
L16685-3|AAA28169.3|  321|Caenorhabditis elegans Hypothetical pr...    29   5.2  
Z81119-3|CAB03334.1|  550|Caenorhabditis elegans Hypothetical pr...    29   9.1  
Z46996-1|CAA87099.1|  472|Caenorhabditis elegans Hypothetical pr...    29   9.1  
U55854-1|AAA98010.2|  418|Caenorhabditis elegans Hypothetical pr...    29   9.1  
AL032657-9|CAA21736.1|  829|Caenorhabditis elegans Hypothetical ...    29   9.1  
AF063007-2|AAC16433.1|  583|Caenorhabditis elegans Hypothetical ...    29   9.1  
AC024785-3|AAF60597.2|  456|Caenorhabditis elegans Hypothetical ...    29   9.1  

>AL008867-2|CAE17750.1|  763|Caenorhabditis elegans Hypothetical
           protein C46E1.3 protein.
          Length = 763

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = +3

Query: 294 SYTYKRFTKMEPMTLGSPTHSPSGSPNVGYLPPXLLGEINPPTTPRTNSLSPTKGRNLAF 473
           +++ + F +  P+ LGS  HS S SP     PP     I PP+ P  + +   +     F
Sbjct: 56  THSLRSFIEETPILLGSSEHSGSSSPPRSSPPPP--PSIPPPSDPPKDGIFHHEDTRKIF 113

Query: 474 G 476
           G
Sbjct: 114 G 114


>L16685-3|AAA28169.3|  321|Caenorhabditis elegans Hypothetical
           protein ZC21.3 protein.
          Length = 321

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +3

Query: 681 NKSLYNDHSFLGYGNNMMLQNSYGNNIDLSVNNQSLSQ 794
           N+ +YN  +  GYGNN   Q SY N +  + NN   +Q
Sbjct: 186 NQGMYNTQTTQGYGNN---QGSYQNQMMYNNNNPQNTQ 220


>Z81119-3|CAB03334.1|  550|Caenorhabditis elegans Hypothetical
           protein T10H4.4 protein.
          Length = 550

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 252 LRLKEIKRANLVAKSYTYKRFTKMEPMTLGSPTHSPS 362
           L  K+  R N +    TYK+ T MEP+T+  P+ + S
Sbjct: 24  LEWKKPTRRNDIEFIVTYKKITDMEPVTIKKPSTAVS 60


>Z46996-1|CAA87099.1|  472|Caenorhabditis elegans Hypothetical
           protein C34C12.1 protein.
          Length = 472

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
 Frame = +3

Query: 225 LLSKL-KVGTLRLKEIKRANLV---AKSYTYKRFTKMEPMTLGSPTHSP 359
           LL +L K+G L+ K  KR  L    A + T +RFTK++ M  GS    P
Sbjct: 180 LLGRLSKLGLLKWKMSKREGLYLYHASNLTRRRFTKLKQMLRGSGCIDP 228


>U55854-1|AAA98010.2|  418|Caenorhabditis elegans Hypothetical
           protein C04G6.4 protein.
          Length = 418

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +3

Query: 333 TLGSPTHSPSGSPNVGYLPPXLLGEINPPTTPRTNSLSP 449
           T G    S    P+V  +PP     +  P  PR  S+SP
Sbjct: 44  TTGEDVKSKDAQPSVTPVPPPTFNPVPNPFAPRPKSVSP 82


>AL032657-9|CAA21736.1|  829|Caenorhabditis elegans Hypothetical
           protein Y47H9C.9 protein.
          Length = 829

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
 Frame = +3

Query: 225 LLSKL-KVGTLRLKEIKRANLV---AKSYTYKRFTKMEPMTLGSPTHSP 359
           LL +L K+G L+ K  KR  L    A + T +RFTK++ M  GS    P
Sbjct: 175 LLGRLSKLGLLKWKMSKREGLYLYHASNLTRRRFTKLKQMLRGSGCIDP 223


>AF063007-2|AAC16433.1|  583|Caenorhabditis elegans Hypothetical
           protein R119.7 protein.
          Length = 583

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = +3

Query: 612 STKPNGPPIEDLFDTIKSNEPSVNKSLYNDHSFLGYGNNMMLQNSY 749
           S+  N   I  +F+ +K    S N S   +HSF  Y N     +SY
Sbjct: 84  SSHANSEAISTMFEKVKHQGNSGNSSYRQEHSFPEYRNQNPQASSY 129


>AC024785-3|AAF60597.2|  456|Caenorhabditis elegans Hypothetical
           protein Y46C8AL.2 protein.
          Length = 456

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 17/58 (29%), Positives = 24/58 (41%)
 Frame = +3

Query: 279 NLVAKSYTYKRFTKMEPMTLGSPTHSPSGSPNVGYLPPXLLGEINPPTTPRTNSLSPT 452
           N    SY  +  TK  P T+ S   +P+   +    P  +      PTTP T   +PT
Sbjct: 139 NYFVCSYDSRWATKPTPSTMKSTPTTPTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPT 196


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,157,974
Number of Sequences: 27780
Number of extensions: 429690
Number of successful extensions: 1245
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1242
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3474674514
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)