Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_N02
         (1282 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27...    29   6.0  
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25...    29   6.0  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    29   6.0  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   6.0  
01_05_0433 - 22094784-22095659                                         29   6.0  
08_02_0732 + 20521459-20522323,20522404-20522480,20523251-205232...    29   7.9  

>12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-274702,
            274781-274912,275038-276330,279841-280545,280649-280695,
            280787-280865
          Length = 929

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 1205 PPPPXKKGXXPPPP 1164
            PPPP K G  PPPP
Sbjct: 627  PPPPGKPGGPPPPP 640


>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
            257038-257169,257297-258589,259133-259837,260465-260549,
            260604-260650,260810-260900,261838-262101,262195-262309,
            262455-262570,262713-262847,262969-263036,263292-263411
          Length = 1235

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 1205 PPPPXKKGXXPPPP 1164
            PPPP K G  PPPP
Sbjct: 932  PPPPGKPGGPPPPP 945


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
 Frame = -1

Query: 613 PXGPPXP-PXKXXFGPGXXXXRFPGXPXXPFFXXPLXPXGXGFPLKKXXFXPP 458
           P GPP P   +  FGPG    + P  P   ++  P  P   G    +    PP
Sbjct: 59  PPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPPP 111


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 1205 PPPPXKKGXXPPPP 1164
            PPPP  KG  PPPP
Sbjct: 336  PPPPPPKGPPPPPP 349



 Score = 29.5 bits (63), Expect = 6.0
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 1205 PPPPXKKGXXPPPP 1164
            PPPP  KG  PPPP
Sbjct: 345  PPPPPAKGPPPPPP 358



 Score = 29.5 bits (63), Expect = 6.0
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 1205 PPPPXKKGXXPPPP 1164
            PPPP  KG  PPPP
Sbjct: 354  PPPPPPKGPSPPPP 367


>01_05_0433 - 22094784-22095659
          Length = 291

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -3

Query: 1223 GGGXFXPPPPXKKGXXPPPPXF 1158
            GGG    PPP   G  PPPP +
Sbjct: 36   GGGGAARPPPMVPGRVPPPPMY 57


>08_02_0732 + 20521459-20522323,20522404-20522480,20523251-20523296,
            20523482-20523713,20524244-20524439
          Length = 471

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = +1

Query: 1165 GGGGXXPFLXGGGG 1206
            GGGG  PFL GGGG
Sbjct: 127  GGGGGHPFLGGGGG 140


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,702,474
Number of Sequences: 37544
Number of extensions: 276764
Number of successful extensions: 2049
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1881
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3980760984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)