Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_N01
         (1137 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0391 - 23740603-23740665,23740805-23740927,23741009-237411...    30   3.9  
05_01_0006 - 44159-44206,44805-44850,45730-45818,46377-46394,464...    29   6.8  
01_01_0056 + 422141-422379,422524-422620,422697-422774,422871-42...    29   6.8  
11_06_0307 - 22250221-22250482,22250664-22250758                       29   9.0  

>03_05_0391 -
           23740603-23740665,23740805-23740927,23741009-23741148,
           23741209-23741264,23742005-23742262,23743290-23743627
          Length = 325

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -2

Query: 860 TVTAREM*YPRSDRNTPXLPSTLTWIATSTWSFSVSIRNP*GPGN 726
           T    E  +P +D+  P   + L     +TW+ S   RNP GPG+
Sbjct: 14  TAFPHETPFPHTDKKVPM--ANLNSYHLATWADSAKTRNPTGPGS 56


>05_01_0006 -
           44159-44206,44805-44850,45730-45818,46377-46394,
           46490-46609,46702-46772,47038-47086,47567-47658,
           47769-47811,47928-48049,48143-48426,48961-49148,
           49220-49336,49516-49557,49991-50101,50530-50688,
           50710-50769,50850-50927,51010-51103,51182-51483,
           51659-51721,51808-51936
          Length = 774

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 19/57 (33%), Positives = 32/57 (56%)
 Frame = -1

Query: 870 IRHDXDGARDVISKIRQEHAGSAVDFNVDRH*HVVLLSLDQKPLRSRERRGVIVKIF 700
           +RH  DG+ + I   +Q       D +VD      LL+++ +PL  R+R+G IVK++
Sbjct: 585 VRHLEDGSVNYIEGAKQPSYLVTAD-DVDS-----LLAIEVQPLDDRKRKGEIVKVY 635


>01_01_0056 +
           422141-422379,422524-422620,422697-422774,422871-422930,
           423019-423123,423743-423856,424145-424186,424380-424496,
           424568-424755,425502-425785,425869-425990,426118-426160,
           426265-426356,427331-427379,427623-427693,427793-427912,
           428586-428674,429266-429311,429926-429973
          Length = 667

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 19/57 (33%), Positives = 32/57 (56%)
 Frame = -1

Query: 870 IRHDXDGARDVISKIRQEHAGSAVDFNVDRH*HVVLLSLDQKPLRSRERRGVIVKIF 700
           +RH  DG+ + I   RQ +     D +VD      LL+++ +PL  R+R+G IV+ +
Sbjct: 484 VRHLEDGSVNFIEGARQPNYLVTAD-DVD-----TLLAIEVQPLDDRKRKGEIVRFY 534


>11_06_0307 - 22250221-22250482,22250664-22250758
          Length = 118

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 223 PTAPTVSTSGEARAIRRIVGRWGAEWLS*LGSRHQDNAGSW 345
           P +P+   SG+A     + GRWG    S +G  H  N G+W
Sbjct: 11  PRSPSRRPSGDAADEGGVAGRWG----SLVGFFHNHNHGAW 47


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,946,006
Number of Sequences: 37544
Number of extensions: 491991
Number of successful extensions: 1313
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1313
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3444772820
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)