Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_M22
         (1141 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0077 - 546033-546223,546314-546566,546635-546865,547165-54...    33   0.56 
08_01_0534 - 4635122-4635380,4635716-4635837                           31   1.3  
11_01_0515 + 4003167-4003229,4003318-4003738,4004224-4004367,400...    31   1.7  
05_01_0184 - 1298640-1298751,1298936-1299027,1299695-1299910,130...    29   6.8  
05_01_0182 + 1284900-1285469,1285604-1286612,1286698-1287107           29   6.8  
10_08_0736 + 20205934-20206551,20207258-20207426,20207562-202076...    29   9.0  

>02_01_0077 -
           546033-546223,546314-546566,546635-546865,547165-547331,
           547369-548008
          Length = 493

 Score = 32.7 bits (71), Expect = 0.56
 Identities = 16/40 (40%), Positives = 16/40 (40%)
 Frame = +1

Query: 13  PTGPSFISQCWSSRQRSGPVPGXPRATRPPQHCGWGRVGP 132
           PT P    Q W S       P  PR   PPQ  GW  V P
Sbjct: 80  PTPPQQQQQPWQSPLPPRREPAPPRTVVPPQEPGWSSVPP 119


>08_01_0534 - 4635122-4635380,4635716-4635837
          Length = 126

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 113 AGVAWARCAGRRRPATSLGLWTGRATDVTR 202
           +GV W  C GR    +++G WTG A + TR
Sbjct: 71  SGVKWKSCGGRTGSRSAVGRWTG-AVEATR 99


>11_01_0515 +
           4003167-4003229,4003318-4003738,4004224-4004367,
           4004474-4004556,4004661-4004775,4005309-4005400,
           4005558-4005612,4005689-4005834,4005888-4006001,
           4006149-4006342,4006985-4007112,4008526-4008583,
           4009800-4009876,4010214-4010263,4010336-4010515,
           4010633-4010731,4010816-4011133,4011221-4011281,
           4011693-4012781,4012951-4013005,4013133-4013291,
           4013923-4014442
          Length = 1406

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
 Frame = +1

Query: 13  PTGPSFISQCWSSRQRSGPVPGXPRATRP-PQHCGWGR 123
           P  P   +    S  R  PVPG P A  P P   GWGR
Sbjct: 87  PASPPAAAPILPSGARGPPVPGSPPAAAPVPPSGGWGR 124


>05_01_0184 -
           1298640-1298751,1298936-1299027,1299695-1299910,
           1300045-1300614
          Length = 329

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +1

Query: 43  WSSRQRSGPVPGXPRATRPPQHCGWGRVGPVRRPAA 150
           W++R+  G V G     RP      GRV   RRP A
Sbjct: 16  WAAREEGGRVAGSSLPRRPTPTTAIGRVAAGRRPPA 51


>05_01_0182 + 1284900-1285469,1285604-1286612,1286698-1287107
          Length = 662

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +1

Query: 43  WSSRQRSGPVPGXPRATRPPQHCGWGRVGPVRRPAA 150
           W++R+  G V G     RP      GRV   RRP A
Sbjct: 16  WAAREEGGRVAGSSLPRRPTPTTAIGRVAAGRRPPA 51


>10_08_0736 +
           20205934-20206551,20207258-20207426,20207562-20207692,
           20208100-20208144,20208145-20208939,20209081-20209128,
           20209504-20209620,20210087-20210161
          Length = 665

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 29  SSPNVGXRGSAAGLCQGSRVQRARPNIVAGV-AWARCAGRRRPATSLGL 172
           S+P  G  GS   LC+G R  R     + GV A ARC   R  A S+ +
Sbjct: 150 SAPPAGWLGSVQPLCRGMRRCRGLVLGIVGVNAAARCLATRSLAFSMSV 198


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,337,759
Number of Sequences: 37544
Number of extensions: 381238
Number of successful extensions: 910
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3456450016
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)