Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_M19
(1180 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78198-7|CAB01573.1| 622|Caenorhabditis elegans Hypothetical pr... 115 6e-26
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 31 1.2
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 31 1.2
AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical ... 30 2.8
AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical ... 30 2.8
U55774-2|AAA98009.3| 380|Caenorhabditis elegans Hypothetical pr... 29 4.8
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 29 4.8
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 29 4.8
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 29 8.4
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 29 8.4
>Z78198-7|CAB01573.1| 622|Caenorhabditis elegans Hypothetical
protein F55C5.8 protein.
Length = 622
Score = 115 bits (277), Expect = 6e-26
Identities = 80/263 (30%), Positives = 133/263 (50%), Gaps = 14/263 (5%)
Frame = +2
Query: 227 IFRXTSASQQQHGLRHADXXXXXXXXXXXXXXXXKVLKXPQGAXRHYRRRX-VTTPHLTA 403
I + +QQQHGLRH D K LK +R+ L+
Sbjct: 22 ILQVVKDAQQQHGLRHGDYARYRKYCAAKLERMRKALKFTNSHNCQKKRKAKFVKKWLSV 81
Query: 404 NNAENX-LLYIPLLQAERAWAHAM--QLRQXANTEP-RKKFHLVSRLKKACAHGQMLLQL 571
+ +N L + ++ER +A AM ++ N E RKKF +++ L+KA H L ++
Sbjct: 82 ESVQNVQFLNFGIFESERRYAEAMIDKITLEDNPEKSRKKFSMINSLRKAVLHATNLEKI 141
Query: 572 CEESGRCEARTVLEAGAYASWLRGVLLLELQQWREAADSLQRARIVLEQLCTAL-PADER 748
+ES R +A T LEA AYA+W+RG+ E + W++A++SL+ A+ V E+L A
Sbjct: 142 VQESERFDAPTKLEAQAYAAWMRGMCSFESRNWQKASESLKLAKTVYEKLAEATNNTTLS 201
Query: 749 IVYDQKLEELKPSLRYCAYNIGDESAA----GDLMAMR---GQGLMHNLDALMAQAKES- 904
++ + E++P LR C +NI + A +LM +R G+G ++D L+++ + S
Sbjct: 202 SIFKGRCREIQPQLRLCEFNIAESPGAVGTMTELMELRMQMGEGGDSSVDKLISEMRASA 261
Query: 905 RSGIMHEVKWRGRRVTVKPEKVR 973
S + ++W G + TV EK +
Sbjct: 262 TSAEVVTIEWGGAKSTVDDEKAK 284
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 31.5 bits (68), Expect = 1.2
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Frame = -2
Query: 723 QSCSSTILARCNESAASRHCCNSSSN----TPRSQEAYAPASSTVRASH-----LPLSSQ 571
Q+C +T L CN S + C +++SN TP + + ST ++ +P Q
Sbjct: 195 QTCQNTCLGSCN-SCSGGGCNSNNSNLVVVTPCERSCNSGCRSTCSSTSTLSVCIPACQQ 253
Query: 570 SCKSICPCAHAF 535
+C+S C A F
Sbjct: 254 TCRSTCSTAKTF 265
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 31.5 bits (68), Expect = 1.2
Identities = 13/63 (20%), Positives = 27/63 (42%)
Frame = -2
Query: 738 AGKAVQSCSSTILARCNESAASRHCCNSSSNTPRSQEAYAPASSTVRASHLPLSSQSCKS 559
A + +C + +C + + C ++ + ++ Y PA + S +P QSC +
Sbjct: 83 ASQCAPACQQSCQMQCQSAPSVSQCQSTCQQSCQASSCYTPAPVQCQPSCMPACKQSCVA 142
Query: 558 ICP 550
P
Sbjct: 143 PAP 145
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 307 APHXQPAXSTQNXTGSQXPLPSSXCHNSPPYGQQC 411
AP QP+ S Q T +Q P S C N+ P C
Sbjct: 34 APRVQPSCSCQQTTYAQPPQYSCSCQNTAPVQTSC 68
>AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.5 protein.
Length = 335
Score = 30.3 bits (65), Expect = 2.8
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = -2
Query: 738 AGKAVQSCSSTILARCNESAASRHCCNSSSNTPRSQEAY---APASSTVRASHLPLSSQS 568
A + +C + +C + + +C +S T ++ Y APA + S +P+ QS
Sbjct: 81 ATQCAPACQQSCQRQCQSAPSVSNCQSSCQQTCQTSSCYTPVAPAPVQCQPSCMPVCEQS 140
Query: 567 CKSICP 550
C + P
Sbjct: 141 CVAPAP 146
>AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.4 protein.
Length = 335
Score = 30.3 bits (65), Expect = 2.8
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = -2
Query: 738 AGKAVQSCSSTILARCNESAASRHCCNSSSNTPRSQEAY---APASSTVRASHLPLSSQS 568
A + +C + +C + + +C +S T ++ Y APA + S +P+ QS
Sbjct: 81 ATQCAPACQQSCQRQCQSAPSVSNCQSSCQQTCQTSSCYTPVAPAPVQCQPSCMPVCEQS 140
Query: 567 CKSICP 550
C + P
Sbjct: 141 CVAPAP 146
>U55774-2|AAA98009.3| 380|Caenorhabditis elegans Hypothetical
protein F35G8.1 protein.
Length = 380
Score = 29.5 bits (63), Expect = 4.8
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = -1
Query: 901 LFSLCHQRIEVVHESLTAHGHKVSGGGLVTDVVSAITKTRLQLL*LLIV 755
L SLCH RI V+ + T + VT K RLQ L L +V
Sbjct: 203 LISLCHWRIAVILNTQTKKFQTLRSASTVTQSTDIRRKQRLQTLLLAMV 251
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 29.5 bits (63), Expect = 4.8
Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = -2
Query: 738 AGKAVQSCSSTILARCNESAASRHCCNSSSNTPRSQEAY---APASSTVRASHLPLSSQS 568
A + +C + +C + + +C +S T ++ Y APA + S +P QS
Sbjct: 81 ATQCAPACQQSCQRQCQSAPSVSNCQSSCQQTCQTSSCYTPVAPAPVQCQPSCMPACEQS 140
Query: 567 CKSICP 550
C + P
Sbjct: 141 CVAPAP 146
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 29.5 bits (63), Expect = 4.8
Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = -2
Query: 738 AGKAVQSCSSTILARCNESAASRHCCNSSSNTPRSQEAY---APASSTVRASHLPLSSQS 568
A + +C + +C + + +C +S T ++ Y APA + S +P QS
Sbjct: 81 ATQCAPACQQSCQRQCQSAPSVSNCQSSCQQTCQTSSCYTPVAPAPVQCQPSCMPACEQS 140
Query: 567 CKSICP 550
C + P
Sbjct: 141 CVAPAP 146
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 29.1 bits (62), Expect = 6.4
Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -2
Query: 738 AGKAVQSCSSTILARCNESAASRHCCNSSSNTPRSQEAYAPASSTVRASHLPLS-SQSCK 562
A K QSC S +++ N +A+ + CN+ + S ++ + ++ Q+C+
Sbjct: 212 APKCTQSCHSQCISQGNPAASCSNSCNTECSDKCSTRPVQAQVQQIQPQQVQITIPQTCQ 271
Query: 561 SIC 553
S C
Sbjct: 272 SRC 274
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 28.7 bits (61), Expect = 8.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 307 APHXQPAXSTQNXTGSQXPLPSSXCHNSPPYGQQC 411
AP QP+ S Q T +Q S C N+ P + C
Sbjct: 32 APRVQPSCSCQRTTYTQPQQYSCSCQNTAPVQKSC 66
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 28.7 bits (61), Expect = 8.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 307 APHXQPAXSTQNXTGSQXPLPSSXCHNSPPYGQQC 411
AP QP+ S Q T +Q S C N+ P + C
Sbjct: 32 APRVQPSCSCQRTTYTQPQQYSCSCQNTAPVQKSC 66
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,507,343
Number of Sequences: 27780
Number of extensions: 370478
Number of successful extensions: 1032
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1027
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3224247522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -