Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_M18
(1187 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 499 e-142
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 486 e-138
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 423 e-119
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 389 e-109
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 308 1e-84
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 191 2e-49
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 171 2e-43
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 106 5e-24
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 29 1.7
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 2.2
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 28 2.2
SPBC3B8.09 |||U3 snoRNP-associated protein Utp3 |Schizosaccharom... 27 5.1
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 26 8.9
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 499 bits (1231), Expect = e-142
Identities = 241/308 (78%), Positives = 266/308 (86%)
Frame = +1
Query: 142 AVGIXLGPTXSCVGVFQHGXVELIANXQGNRXTPSYVAFTXTERLIGAAAKXQVAMNPNN 321
++GI LG T SCVG F + VE+IAN QGNR TPSYVAFT TERLIG AAK QVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 322 TIFDAKRLIGRKFEXATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 501
TIFDAKRLIGRKF+ VQ+DMKHWPF+V+S GKP ++V YKGE KTF PEE+SSMVL
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLM 123
Query: 502 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 681
KM+ETAEAYLG V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGL
Sbjct: 124 KMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL 183
Query: 682 DKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEF 861
D+ GE NVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+VNHF+QEF
Sbjct: 184 DRSNQGESNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFIQEF 243
Query: 862 KRKYKKDLATNKRALRRLRTACERAKRTLSSSTQAXIXIXSLFEGIDFYTSITRARFXXL 1041
KRK KKD+ N RA+RRLRTACERAKRTLSSS QA I I SLFEGIDFYTSITRARF L
Sbjct: 244 KRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEEL 303
Query: 1042 XADLFRXT 1065
ADLFR T
Sbjct: 304 CADLFRKT 311
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 486 bits (1198), Expect = e-138
Identities = 235/308 (76%), Positives = 262/308 (85%)
Frame = +1
Query: 142 AVGIXLGPTXSCVGVFQHGXVELIANXQGNRXTPSYVAFTXTERLIGAAAKXQVAMNPNN 321
++GI LG T SCVG F + VE+IAN QGNR TPSYVAFT TERLIG AAK QVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 322 TIFDAKRLIGRKFEXATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 501
TIFDAKRLIGR+F VQ+DMKHWPF+V+ GKP I+V +KGE KTF PEE+SSMVL
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLL 123
Query: 502 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 681
KM+E+AEA+LG V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGL
Sbjct: 124 KMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL 183
Query: 682 DKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEF 861
D+ E NVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+VNHF QEF
Sbjct: 184 DRSNQHETNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFAQEF 243
Query: 862 KRKYKKDLATNKRALRRLRTACERAKRTLSSSTQAXIXIXSLFEGIDFYTSITRARFXXL 1041
KRK KKD+ N RA+RRLRTACERAKRTLSSS QA I I SL+EGIDFYTSITRARF L
Sbjct: 244 KRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEIDSLYEGIDFYTSITRARFEEL 303
Query: 1042 XADLFRXT 1065
ADLFR T
Sbjct: 304 CADLFRNT 311
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 423 bits (1041), Expect = e-119
Identities = 204/308 (66%), Positives = 241/308 (78%)
Frame = +1
Query: 142 AVGIXLGPTXSCVGVFQHGXVELIANXQGNRXTPSYVAFTXTERLIGAAAKXQVAMNPNN 321
A+GI LG T SCV V++ VE+I N QG R TPS+VAFT TERL+G AAK Q AMNP N
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
Query: 322 TIFDAKRLIGRKFEXATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 501
T+FDAKRLIGR++E Q D+KHWPF+V+ + G P I+V Y GE K F +E+S+MVLT
Sbjct: 68 TVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLT 127
Query: 502 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 681
KMKE +EA L K V+ AVITVPAYF+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGL
Sbjct: 128 KMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGL 187
Query: 682 DKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEF 861
D K +NVLIFDLGGGTFDVS+L I+ G+FEV +TAGDTHLGGEDFDN +V HF+QEF
Sbjct: 188 DAKSDKPKNVLIFDLGGGTFDVSLLKIQGGVFEVLATAGDTHLGGEDFDNALVEHFIQEF 247
Query: 862 KRKYKKDLATNKRALRRLRTACERAKRTLSSSTQAXIXIXSLFEGIDFYTSITRARFXXL 1041
KRK K D++ + RALRRLR+ACERAKR LSS TQ + + SL GIDF +SITRARF +
Sbjct: 248 KRKQKIDISDDPRALRRLRSACERAKRALSSVTQTTVEVDSLSNGIDFSSSITRARFEDI 307
Query: 1042 XADLFRXT 1065
A F+ T
Sbjct: 308 NATTFKAT 315
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||Manual
Length = 663
Score = 389 bits (957), Expect = e-109
Identities = 181/307 (58%), Positives = 238/307 (77%)
Frame = +1
Query: 145 VGIXLGPTXSCVGVFQHGXVELIANXQGNRXTPSYVAFTXTERLIGAAAKXQVAMNPNNT 324
+GI LG T SCV V ++G VE+IAN QGNR TPSYVAFT ERL+G AAK Q NP NT
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 325 IFDAKRLIGRKFEXATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTK 504
IFD KRLIGRKF+ T+ D+K +PF +V+D +P ++V G+ K F PEE+S+M+L+K
Sbjct: 98 IFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSK 157
Query: 505 MKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 684
MK+TAEAYLGK V +AV+TVPAYFND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLD
Sbjct: 158 MKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLD 217
Query: 685 KKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFK 864
K T E++++++DLGGGTFDVS+L+I++G+FEV +T+GDTHLGGEDFDNR++N+ + +
Sbjct: 218 KTDT-EKHIVVYDLGGGTFDVSLLSIDNGVFEVLATSGDTHLGGEDFDNRVINYLARTYN 276
Query: 865 RKYKKDLATNKRALRRLRTACERAKRTLSSSTQAXIXIXSLFEGIDFYTSITRARFXXLX 1044
RK D+ + +A+ +L+ E+AKRTLSS I I S F G DF +++RA+F +
Sbjct: 277 RKNNVDVTKDLKAMGKLKREVEKAKRTLSSQKSVRIEIESFFNGQDFSETLSRAKFEEIN 336
Query: 1045 ADLFRXT 1065
DLF+ T
Sbjct: 337 MDLFKKT 343
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 308 bits (755), Expect = 1e-84
Identities = 158/322 (49%), Positives = 212/322 (65%), Gaps = 5/322 (1%)
Frame = +1
Query: 115 SKSKMAKAPAVGIXLGPTXSCVGVFQHGXVELIANXQGNRXTPSYVAFTXT-ERLIGAAA 291
S ++ K P +GI LG T SC+ + + ++IAN +G R TPS VAFT ERL+G +A
Sbjct: 43 SGNEKVKGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSA 102
Query: 292 KXQVAMNPNNTIFDAKRLIGRKFEXATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFF 471
K Q +NP NT F KRLIGR+F+ VQ D+K P+++V + KT+
Sbjct: 103 KRQAVINPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYS 159
Query: 472 PEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINE 651
P ++ +L+KM+ETA YLGK V+NAV+TVPAYFNDSQRQATK AG I+GLNVLR++NE
Sbjct: 160 PSQIGGFILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNE 219
Query: 652 PTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDN 831
PTAAA+AYGLDKK + V +FDLGGGTFD+SIL + +G+FEV+ST GDTHLGGEDFD
Sbjct: 220 PTAAALAYGLDKK--NDAIVAVFDLGGGTFDISILELNNGVFEVRSTNGDTHLGGEDFDV 277
Query: 832 RMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQAXIXIXSLFEGI---- 999
+V H V+ FK+ DL+ ++ A++R+R A E+AK LSS ++ I + +
Sbjct: 278 ALVRHIVETFKKNEGLDLSKDRLAVQRIREAAEKAKCELSSLSKTDISLPFITADATGPK 337
Query: 1000 DFYTSITRARFXXLXADLFRXT 1065
I+RA+F L L R T
Sbjct: 338 HINMEISRAQFEKLVDPLVRRT 359
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 191 bits (465), Expect = 2e-49
Identities = 109/313 (34%), Positives = 168/313 (53%), Gaps = 5/313 (1%)
Frame = +1
Query: 130 AKAPAVGIXLGPTXSCVGVFQHGXVELIANXQGNRXTPSYVAFTXTERLIGAAAKXQVAM 309
++ VGI G + + + V ++ +++I N NR TPS V++ R +G AAK A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 310 NPNNTIFDAKRLIGRKFEXATVQ-ADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 486
N NT+ KRL GR ++ ++ + ++ G KV Y E+ F ++
Sbjct: 63 NFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLI 122
Query: 487 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 666
+ TK+K AEA L +V + VI++PA+F D QR+A +A I+GLN LR++N+ AAA
Sbjct: 123 AAYFTKIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAA 182
Query: 667 IAYGLDKKGTGE----RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNR 834
+ YG+ K E R V I D G + VSI+ G F +KST D +LG + D
Sbjct: 183 LTYGITKTDLPEPESPRRVAIVDFGHSNYSVSIVEFSRGQFHIKSTVCDRNLGSRNMDKA 242
Query: 835 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQAXIXIXSLFEGIDFYTS 1014
++++F EFK KYK D+ +N +A RL TA ER K+ LS++ A + + + ID +
Sbjct: 243 LIDYFAAEFKEKYKIDVLSNPKATFRLATAVERLKKVLSANANAPLNVEMIMNDIDASSF 302
Query: 1015 ITRARFXXLXADL 1053
I R+ F L L
Sbjct: 303 IKRSDFEELIKPL 315
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 171 bits (416), Expect = 2e-43
Identities = 92/302 (30%), Positives = 167/302 (55%), Gaps = 6/302 (1%)
Frame = +1
Query: 145 VGIXLGPTXSCVGVFQHGXVELIANXQGNRXTPSYVAFTXTERLIGAAAKXQVAMNPNNT 324
+GI G S + + G +++AN +GNR PS +++ + G A+ Q+ N +N+
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNS 86
Query: 325 IFDAKRLIGRKFEXATVQADMKHWPFEVVSDGGKPKIKVAYKGED------KTFFPEEVS 486
+ + + L+G+ + T+ H+ V+ G+ K+ + ++ K E S
Sbjct: 87 VTNFRDLLGKSHDELTLHHC--HYSANPVNVEGQIGFKITVQEDEESDPKEKILTAHEAS 144
Query: 487 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 666
L ++ E+AE +LG V V++VP YF D+QR+A + A +GL VL++I++P A
Sbjct: 145 VRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAVI 204
Query: 667 IAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 846
+A ++ ++ V++ + G +VS+++++ G+ + ++ D +LGGE + +VN
Sbjct: 205 LALMYSEEVLIDKTVVVANFGATRSEVSVVSVKGGLMTILASVHDENLGGEQLTDVLVNF 264
Query: 847 FVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQAXIXIXSLFEGIDFYTSITRA 1026
F +EF++K D N R+L +LR CE KR LS+ T A + SL +GIDF++SI R
Sbjct: 265 FAKEFEKKNGIDPRKNARSLAKLRAQCEITKRVLSNGTTASAAVDSLADGIDFHSSINRL 324
Query: 1027 RF 1032
R+
Sbjct: 325 RY 326
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 848
Score = 106 bits (255), Expect = 5e-24
Identities = 80/299 (26%), Positives = 139/299 (46%), Gaps = 15/299 (5%)
Frame = +1
Query: 202 VELIANXQGNRXTPSYVAFTXTERLIGAAAKXQVAMNPNNTIFDAKRLIGRK-FEXATVQ 378
+E++ R S VAF ER+ G A P ++I + K L+ E VQ
Sbjct: 45 LEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAHSIRNVKELLDTAGLESVLVQ 104
Query: 379 ADMKHWPFEVVSDGGKPKIKVAYK-GEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAV 555
+P + + + +++ +++ + EE+ +M + AE + + + V
Sbjct: 105 KYQSSYPAIQLVENEETTSGISFVISDEENYSLEEIIAMTMEHYISLAEEMAHEKITDLV 164
Query: 556 ITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK-GTGERNVLIFDLGG 732
+TVP +FN+ QR +A I +VL +I++ A AI Y L + T +I+D G
Sbjct: 165 LTVPPHFNELQRSILLEAARILNKHVLALIDDNVAVAIEYSLSRSFSTDPTYNIIYDSGS 224
Query: 733 GTFDVSIL---TIE-------DGIFEVKSTA-GDT-HLGGEDFDNRMVNHFVQEFKRKYK 876
G+ +++ T+E I +++ A G T L G + + +++ F +K+
Sbjct: 225 GSTSATVISFDTVEGSSLGKKQNITRIRALASGFTLKLSGNEINRKLIGFMKNSFYQKHG 284
Query: 877 KDLATNKRALRRLRTACERAKRTLSSSTQAXIXIXSLFEGIDFYTSITRARFXXLXADL 1053
DL+ N RAL RL R K LS++++A I L +GIDF ITR+ L D+
Sbjct: 285 IDLSHNHRALARLEKEALRVKHILSANSEAIASIEELADGIDFRLKITRSVLESLCKDM 343
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 28.7 bits (61), Expect = 1.7
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -1
Query: 827 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSK 717
+KSSP K VSP V SK +S V + S +P +K
Sbjct: 203 NKSSPVKHVSPNVKNNSKKTASSVNSNHSSIPSSITK 239
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 2.2
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = -1
Query: 827 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLS 681
+ S PP P + IP PPPRS ST R P P S
Sbjct: 333 NSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSS 381
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 28.3 bits (60), Expect = 2.2
Identities = 35/157 (22%), Positives = 64/157 (40%)
Frame = -1
Query: 827 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP*AIAAAVGS 648
S SS P S + DF+S I + + +S +P S +S+ S S P + + ++ S
Sbjct: 541 SSSSIP--TSSSSDFSSSITTISSGISSSSIPSTFSSVSSILSSST--SSPSSTSLSISS 596
Query: 647 LMIRRTFKPEMVPASFVACL*ESLKYAGTVITAFCTVLPR*ASAVSFIFVSTMELTSSGK 468
TF S + I++ T+L + S + +S+ + S
Sbjct: 597 SSTSSTFSSAST---------SSPSSISSSISSSSTILSSPTPSTSSLMISSSSIISGSS 647
Query: 467 KVLSSPLYATLILGLPPSLTTSKGQCFMSACTVAXSN 357
+LSS + + + SL+T S+ T+ S+
Sbjct: 648 SILSSSIST---IPISSSLSTYSSSVIPSSSTLVSSS 681
>SPBC3B8.09 |||U3 snoRNP-associated protein Utp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 597
Score = 27.1 bits (57), Expect = 5.1
Identities = 33/157 (21%), Positives = 68/157 (43%), Gaps = 3/157 (1%)
Frame = +1
Query: 484 SSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAA 663
SS+ + ++KE + T ++ + ++N +Q + DA + L + +E A
Sbjct: 15 SSLKVPEIKEKEKINAINTYEDVANSEDEFYN-AQDKILFDADNGEQADELELSDEELVA 73
Query: 664 AIAYGLDKKGTGERNVLIFD-LGGGTFDVSILTIEDGIFEVKS--TAGDTHLGGEDFDNR 834
+ ++ G E N+ + L G D E+ +++ K + ++ GG+D+DN
Sbjct: 74 LESSSDEEDGNAEENLSENEELSGKKKDA---VNEEELYDNKGWGRSAKSYYGGDDYDNE 130
Query: 835 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRT 945
+ EF + ++ + ALR R E+ T
Sbjct: 131 DYSEEDDEFDARMEE-----QEALRLQRKRLEKVSET 162
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 26.2 bits (55), Expect = 8.9
Identities = 19/57 (33%), Positives = 22/57 (38%)
Frame = +1
Query: 679 LDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 849
LDK G+ I GG T SIL +GI VK E F+N F
Sbjct: 48 LDKAPAGKVKDYIASHGGHTVITSILIANNGIAAVKEIRSIRKWAYETFNNERAIKF 104
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,241,054
Number of Sequences: 5004
Number of extensions: 82325
Number of successful extensions: 265
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 256
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 639490422
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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