Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_M18
         (1187 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein...   137   7e-34
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    27   1.4  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    27   1.4  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           25   5.7  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           25   5.7  

>AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein 70
           protein.
          Length = 78

 Score =  137 bits (331), Expect = 7e-34
 Identities = 65/75 (86%), Positives = 71/75 (94%)
 Frame = +1

Query: 547 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 726
           +AVITVPAYFNDSQRQATKDAG I+GLNV+RIINEPTAAA+AYGLDK   GERNVLIFDL
Sbjct: 1   DAVITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAALAYGLDKNLKGERNVLIFDL 60

Query: 727 GGGTFDVSILTIEDG 771
           GGGTFDVSILTI++G
Sbjct: 61  GGGTFDVSILTIDEG 75


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 26.6 bits (56), Expect = 1.4
 Identities = 11/54 (20%), Positives = 25/54 (46%)
 Frame = +2

Query: 20  GAFXHLRLFLASPPSIAHVCLXGFHHKSQXLXQNPKWQKHPQXASXWVPRXLAL 181
           G + +  +F+ +   +  V +  +HH++  + + P W K       W+P  L +
Sbjct: 295 GTYFNCIMFMVASSVVLTVVVLNYHHRTADIHEMPPWIK--SVFLQWLPWILRM 346


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 26.6 bits (56), Expect = 1.4
 Identities = 11/54 (20%), Positives = 25/54 (46%)
 Frame = +2

Query: 20  GAFXHLRLFLASPPSIAHVCLXGFHHKSQXLXQNPKWQKHPQXASXWVPRXLAL 181
           G + +  +F+ +   +  V +  +HH++  + + P W K       W+P  L +
Sbjct: 295 GTYFNCIMFMVASSVVLTVVVLNYHHRTADIHEMPPWIK--SVFLQWLPWILRM 346


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 24.6 bits (51), Expect = 5.7
 Identities = 8/33 (24%), Positives = 15/33 (45%)
 Frame = -1

Query: 806 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKIST 708
           W+ P    T+ +P++         PPP +  +T
Sbjct: 221 WIDPTATTTTHVPTTTTTWSDLPPPPPTTTTTT 253


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.6 bits (51), Expect = 5.7
 Identities = 8/33 (24%), Positives = 15/33 (45%)
 Frame = -1

Query: 806 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKIST 708
           W+ P    T+ +P++         PPP +  +T
Sbjct: 222 WIDPTATTTTHVPTTTTTWSDLPPPPPTTTTTT 254


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,104,158
Number of Sequences: 2352
Number of extensions: 21179
Number of successful extensions: 56
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 134477763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)