Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_M17
         (1179 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   4.5  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   5.9  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   5.9  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   5.9  

>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 220 ERVDFFIPDIVELDGPFLLRP 158
           E V+  IPD+++  GP   +P
Sbjct: 193 EGVEIRIPDVIKTSGPHKFQP 213


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = +1

Query: 820 RYQAFPPGSSLVRSPVPTLPLTGYLSAFL--PSGSVALP 930
           RY  +   +S++  P P +P  G+    L  PS  V+ P
Sbjct: 225 RYNPYLQAASMLPKPTPLVPQQGFNMERLLAPSTEVSAP 263


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 389 NFTNKAFFSLH 357
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 389 NFTNKAFFSLH 357
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,828
Number of Sequences: 336
Number of extensions: 4786
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 34434398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)