Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_M16
         (1144 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1574 + 38337669-38338196                                         32   0.97 
07_03_1555 - 27669981-27670148,27670232-27670315,27670349-276703...    31   2.2  
06_01_0203 + 1555471-1555523,1555743-1555863,1556340-1556651,155...    29   6.9  

>01_06_1574 + 38337669-38338196
          Length = 175

 Score = 31.9 bits (69), Expect = 0.97
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = -1

Query: 364 AESVCHVSLYHLRNWRINSPGARSSRGANYGLISRCLCHFC 242
           A S+C    YH+R  R     +   +G  Y     CLC  C
Sbjct: 37  AHSLCPYKFYHIRCLRYEQIASSEQQGNEYWYCPSCLCRVC 77


>07_03_1555 -
           27669981-27670148,27670232-27670315,27670349-27670360,
           27670683-27670761,27670840-27671078,27671167-27671260,
           27671342-27671484,27671688-27671786,27671870-27671998,
           27672123-27672197,27672308-27672520,27672581-27672676,
           27673282-27673380,27673600-27673839,27674212-27674322,
           27674429-27674626,27674720-27674835,27675076-27675193,
           27675761-27675866,27675972-27676030,27676259-27676388,
           27676730-27676887,27677672-27677887,27677972-27678082,
           27678313-27678472,27679364-27679509,27679603-27679695,
           27680610-27680706,27681224-27681294,27681407-27681505,
           27682037-27682168,27682287-27682729,27683252-27683564,
           27684301-27684549
          Length = 1631

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = -1

Query: 487 AISCQHTKLLRVGINASASVNVRVHFCIVFGNSACGVG*ANAESVC-HVSLYHLRNWRIN 311
           A+   H  L++ G+  SAS+      C      AC +G   A ++C +++L   R WR++
Sbjct: 722 AVGAIHQHLIQNGLRMSASIVADTAQCFSTHQFACLIG-YGASAICPYLALETCRQWRLS 780

Query: 310 S 308
           +
Sbjct: 781 N 781


>06_01_0203 +
           1555471-1555523,1555743-1555863,1556340-1556651,
           1556806-1556910,1557009-1557466,1557886-1558187,
           1558300-1558481,1558893-1559083,1559248-1559381,
           1559487-1559725
          Length = 698

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +1

Query: 826 KYQYLNSHLNIMNKFVFF-KVPIIIL*YESYAAWFGATSIIC 948
           KY +++  LN++N F++     II+   + Y+   GA S +C
Sbjct: 245 KYHFMSLMLNLVNTFLYMVNTYIIVPTADDYSVSLGAASTVC 286


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,950,312
Number of Sequences: 37544
Number of extensions: 412913
Number of successful extensions: 716
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3468127212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)