Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_M14
(1177 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC003136-1|AAH03136.1| 453|Homo sapiens ubiquinol-cytochrome c ... 155 3e-37
BC000484-1|AAH00484.1| 453|Homo sapiens UQCRC2 protein protein. 155 3e-37
J04973-1|AAA35710.1| 453|Homo sapiens protein ( Human cytochrom... 153 9e-37
BC010398-1|AAH10398.1| 490|Homo sapiens PMPCB protein protein. 66 3e-10
L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c re... 63 2e-09
D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein. 63 2e-09
BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c ... 63 2e-09
BC014079-1|AAH14079.2| 480|Homo sapiens PMPCB protein protein. 63 2e-09
>BC003136-1|AAH03136.1| 453|Homo sapiens ubiquinol-cytochrome c
reductase core protein II protein.
Length = 453
Score = 155 bits (376), Expect = 3e-37
Identities = 87/253 (34%), Positives = 134/253 (52%), Gaps = 3/253 (1%)
Frame = +1
Query: 175 IRGYAQAAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSH 354
++ A A A + ++ + LPN +A+L+N SPV+R+ + KAGSRYE + LG +H
Sbjct: 22 VKATAAPAGAPPQPQDLEFTKLPNGLVIASLENYSPVSRIGLFIKAGSRYEDFSNLGTTH 81
Query: 355 VLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDRELIYYTLEATQDKLNDALEILNNLV 534
+LR + LTTK SSF I R + +G +S + RE + YT+E + ++ +E L N+
Sbjct: 82 LLRLTSSLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVECLRGDVDILMEFLLNVT 141
Query: 535 SNQEFRPWELNDNAPRLKYD--IISLPPQIRAVDLLHKAAYRRGLGNSLFISPKRINDIS 708
+ EFR WE+ D P+LK D + PQ ++ LH AAYR L N L+ RI ++
Sbjct: 142 TAPEFRRWEVADLQPQLKIDKAVAFQNPQTHVIENLHAAAYRNALANPLYCPDYRIGKVT 201
Query: 709 SESLQLFASQNITPSRCAVTVIGDSQERAALIV-QNLKLTSSDASQAEASTYYGGELRKE 885
SE L F + T +R A+ +G S + Q L + + Y GGE+R++
Sbjct: 202 SEELHYFVQNHFTSARMALIGLGVSHPVLKQVAEQFLNMRGGLGLSGAKANYRGGEIREQ 261
Query: 886 IGGDLAHVALAVQ 924
G L H A +
Sbjct: 262 NGDSLVHAAFVAE 274
>BC000484-1|AAH00484.1| 453|Homo sapiens UQCRC2 protein protein.
Length = 453
Score = 155 bits (376), Expect = 3e-37
Identities = 87/253 (34%), Positives = 134/253 (52%), Gaps = 3/253 (1%)
Frame = +1
Query: 175 IRGYAQAAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSH 354
++ A A A + ++ + LPN +A+L+N SPV+R+ + KAGSRYE + LG +H
Sbjct: 22 VKATAAPAGAPPQPQDLEFTKLPNGLVIASLENYSPVSRIGLFIKAGSRYEDFSNLGTTH 81
Query: 355 VLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDRELIYYTLEATQDKLNDALEILNNLV 534
+LR + LTTK SSF I R + +G +S + RE + YT+E + ++ +E L N+
Sbjct: 82 LLRLTSSLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVECLRGDVDILMEFLLNVT 141
Query: 535 SNQEFRPWELNDNAPRLKYD--IISLPPQIRAVDLLHKAAYRRGLGNSLFISPKRINDIS 708
+ EFR WE+ D P+LK D + PQ ++ LH AAYR L N L+ RI ++
Sbjct: 142 TAPEFRRWEVADLQPQLKIDKAVAFQNPQTHVIENLHAAAYRNALANPLYCPDYRIGKVT 201
Query: 709 SESLQLFASQNITPSRCAVTVIGDSQERAALIV-QNLKLTSSDASQAEASTYYGGELRKE 885
SE L F + T +R A+ +G S + Q L + + Y GGE+R++
Sbjct: 202 SEELHYFVQNHFTSARMALIGLGVSHPVLKQVAEQFLNMRGGLGLSGAKANYRGGEIREQ 261
Query: 886 IGGDLAHVALAVQ 924
G L H A +
Sbjct: 262 NGDSLVHAAFVAE 274
>J04973-1|AAA35710.1| 453|Homo sapiens protein ( Human cytochrome
bc-1 complex core protein II mRNA, complete cds. ).
Length = 453
Score = 153 bits (372), Expect = 9e-37
Identities = 86/253 (33%), Positives = 134/253 (52%), Gaps = 3/253 (1%)
Frame = +1
Query: 175 IRGYAQAAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSH 354
++ A A A + ++ + LPN +A+L+N SPV+R+ + KAGSRYE + LG +H
Sbjct: 22 VKATAAPAGAPPQPQDLEFTKLPNGLVIASLENYSPVSRIGLFIKAGSRYEDFSNLGTTH 81
Query: 355 VLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDRELIYYTLEATQDKLNDALEILNNLV 534
+LR + LTTK SSF I R + +G +S + RE + YT+E + ++ +E L N+
Sbjct: 82 LLRLTSSLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVECLRGDVDILMEFLLNVT 141
Query: 535 SNQEFRPWELNDNAPRLKYD--IISLPPQIRAVDLLHKAAYRRGLGNSLFISPKRINDIS 708
+ EFR WE+ D P+LK D + PQ ++ LH AAY+ L N L+ RI ++
Sbjct: 142 TAPEFRRWEVADLQPQLKIDKAVAFQNPQTHVIENLHAAAYQNALANPLYCPDYRIGKVT 201
Query: 709 SESLQLFASQNITPSRCAVTVIGDSQERAALIV-QNLKLTSSDASQAEASTYYGGELRKE 885
SE L F + T +R A+ +G S + Q L + + Y GGE+R++
Sbjct: 202 SEELHYFVQNHFTSARMALIGLGVSHPVLKQVAEQFLNMRGGLGLSGAKANYRGGEIREQ 261
Query: 886 IGGDLAHVALAVQ 924
G L H A +
Sbjct: 262 NGDSLVHAAFVAE 274
>BC010398-1|AAH10398.1| 490|Homo sapiens PMPCB protein protein.
Length = 490
Score = 65.7 bits (153), Expect = 3e-10
Identities = 77/325 (23%), Positives = 127/325 (39%), Gaps = 14/325 (4%)
Frame = +1
Query: 190 QAAPAVKKDV-RIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVLRS 366
QAA V +V + + L + VA+ D+G V + AGSRYE + G +H L
Sbjct: 46 QAATQVVLNVPETRVTCLESGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEH 105
Query: 367 AAGLTTKNISSFLIQRKLSQIGAYVSASGDRELIYYTLEATQDKLNDALEILNNLVSNQE 546
A TK S ++ ++ +GA+++A RE Y +A L A+EIL +++ N
Sbjct: 106 MAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNST 165
Query: 547 FRPWELNDNAPRLKYDIISLPPQIRAV--DLLHKAAYRR-GLGNSLFISPKRINDISSES 717
E+ + ++ + ++ V D LH AY+ LG ++ + I IS +
Sbjct: 166 LGEAEIERERGVILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSISRKD 225
Query: 718 LQLFASQNITPSRCAVTVIGDSQERAALIVQNLKLTSS------DASQAEASTYYGGELR 879
L + + + R + G L + S + + G E+R
Sbjct: 226 LVDYITTHYKGPRIVLAAAGGVSHDELLDLAKFHFGDSLCTHKGEIPALPPCKFTGSEIR 285
Query: 880 -KEIGGDLAHVALAVQXXXXXXXXXXXXXXXXXXXXXXPXNKVGGR*LSSXQRP---SGX 1047
++ LAH+A+AV+ + GG LSS G
Sbjct: 286 VRDDKMPLAHLAIAVEAVGWAHPDTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCHGN 345
Query: 1048 XAHSXGAGFNVXYXXXGYSGVVLSC 1122
HS FN Y G G+ + C
Sbjct: 346 LCHSF-QSFNTSYTDTGLWGLYMVC 369
>L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core I protein protein.
Length = 480
Score = 63.3 bits (147), Expect = 2e-09
Identities = 60/266 (22%), Positives = 114/266 (42%), Gaps = 11/266 (4%)
Frame = +1
Query: 160 IRHVTIRGYAQAAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAE 339
+R +R A A A++ Q S+L N VA+ + P V + GSR+E +
Sbjct: 27 LRTPALRSTATFAQALQFVPETQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRFETEKN 86
Query: 340 LGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDRELIYYTLEATQDKLNDALEI 519
G + L A TKN +++++ +GA+++A RE Y ++A L A+E+
Sbjct: 87 NGAGYFLEHLAFKGTKNRPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVEL 146
Query: 520 LNNLVSNQEFRPWELNDNAPRLKYDIISLPPQIRAV--DLLHKAAYR-RGLGNSLFISPK 690
L ++V N ++ + ++ +R V + LH A++ L ++ +
Sbjct: 147 LGDIVQNCSLEDSQIEKERDVILREMQENDASMRDVVFNYLHATAFQGTPLAQAVEGPSE 206
Query: 691 RINDISSESLQLFASQNITPSRCAVTVIGDSQERAALIVQNLKLTSSDASQAEAST---- 858
+ +S L + S + R + G + + L + L + AE +
Sbjct: 207 NVRKLSRADLTEYLSTHYKAPRMVLAAAGGVEHQQLLDLAQKHLGGIPWTYAEDAVPTLT 266
Query: 859 ---YYGGELR-KEIGGDLAHVALAVQ 924
+ G E+R ++ AHVA+AV+
Sbjct: 267 PCRFTGSEIRHRDDALPFAHVAIAVE 292
>D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein.
Length = 480
Score = 63.3 bits (147), Expect = 2e-09
Identities = 60/266 (22%), Positives = 114/266 (42%), Gaps = 11/266 (4%)
Frame = +1
Query: 160 IRHVTIRGYAQAAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAE 339
+R +R A A A++ Q S+L N VA+ + P V + GSR+E +
Sbjct: 27 LRTPALRSTATFAQALQFVPETQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRFETEKN 86
Query: 340 LGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDRELIYYTLEATQDKLNDALEI 519
G + L A TKN +++++ +GA+++A RE Y ++A L A+E+
Sbjct: 87 NGAGYFLEHLAFKGTKNRPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVEL 146
Query: 520 LNNLVSNQEFRPWELNDNAPRLKYDIISLPPQIRAV--DLLHKAAYR-RGLGNSLFISPK 690
L ++V N ++ + ++ +R V + LH A++ L ++ +
Sbjct: 147 LGDIVQNCSLEDSQIEKERDVILREMQENDASMRDVVFNYLHATAFQGTPLAQAVEGPSE 206
Query: 691 RINDISSESLQLFASQNITPSRCAVTVIGDSQERAALIVQNLKLTSSDASQAEAST---- 858
+ +S L + S + R + G + + L + L + AE +
Sbjct: 207 NVRKLSRADLTEYLSTHYKAPRMVLAAAGGVEHQQLLDLAQKHLGGIPWTYAEDAVPTLT 266
Query: 859 ---YYGGELR-KEIGGDLAHVALAVQ 924
+ G E+R ++ AHVA+AV+
Sbjct: 267 PCRFTGSEIRHRDDALPFAHVAIAVE 292
>BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core protein I protein.
Length = 480
Score = 63.3 bits (147), Expect = 2e-09
Identities = 60/266 (22%), Positives = 114/266 (42%), Gaps = 11/266 (4%)
Frame = +1
Query: 160 IRHVTIRGYAQAAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAE 339
+R +R A A A++ Q S+L N VA+ + P V + GSR+E +
Sbjct: 27 LRTPALRSTATFAQALQFVPETQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRFETEKN 86
Query: 340 LGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDRELIYYTLEATQDKLNDALEI 519
G + L A TKN +++++ +GA+++A RE Y ++A L A+E+
Sbjct: 87 NGAGYFLEHLAFKGTKNRPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVEL 146
Query: 520 LNNLVSNQEFRPWELNDNAPRLKYDIISLPPQIRAV--DLLHKAAYR-RGLGNSLFISPK 690
L ++V N ++ + ++ +R V + LH A++ L ++ +
Sbjct: 147 LGDIVQNCSLEDSQIEKERDVILREMQENDASMRDVVFNYLHATAFQGTPLAQAVEGPSE 206
Query: 691 RINDISSESLQLFASQNITPSRCAVTVIGDSQERAALIVQNLKLTSSDASQAEAST---- 858
+ +S L + S + R + G + + L + L + AE +
Sbjct: 207 NVRKLSRADLTEYLSTHYKAPRMVLAAAGGVEHQQLLDLAQKHLGGIPWTYAEDAVPTLT 266
Query: 859 ---YYGGELR-KEIGGDLAHVALAVQ 924
+ G E+R ++ AHVA+AV+
Sbjct: 267 PCRFTGSEIRHRDDALPFAHVAIAVE 292
>BC014079-1|AAH14079.2| 480|Homo sapiens PMPCB protein protein.
Length = 480
Score = 62.9 bits (146), Expect = 2e-09
Identities = 76/325 (23%), Positives = 126/325 (38%), Gaps = 14/325 (4%)
Frame = +1
Query: 190 QAAPAVKKDV-RIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVLRS 366
QAA V +V + + L + VA+ D+G V + AGSRYE + G +H
Sbjct: 37 QAATQVVLNVPETRVTCLESGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAHFPEH 96
Query: 367 AAGLTTKNISSFLIQRKLSQIGAYVSASGDRELIYYTLEATQDKLNDALEILNNLVSNQE 546
A TK S ++ ++ +GA+++A RE Y +A L A+EIL +++ N
Sbjct: 97 MAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNST 156
Query: 547 FRPWELNDNAPRLKYDIISLPPQIRAV--DLLHKAAYRR-GLGNSLFISPKRINDISSES 717
E+ + ++ + ++ V D LH AY+ LG ++ + I IS +
Sbjct: 157 LGEAEIERERGVILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSISRKD 216
Query: 718 LQLFASQNITPSRCAVTVIGDSQERAALIVQNLKLTSS------DASQAEASTYYGGELR 879
L + + + R + G L + S + + G E+R
Sbjct: 217 LVDYITTHYKGPRIVLAAAGGVSHDELLDLAKFHFGDSLCTHKGEIPALPPCKFTGSEIR 276
Query: 880 -KEIGGDLAHVALAVQXXXXXXXXXXXXXXXXXXXXXXPXNKVGGR*LSSXQRP---SGX 1047
++ LAH+A+AV+ + GG LSS G
Sbjct: 277 VRDDKMPLAHLAIAVEAVGWAHPDTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCHGN 336
Query: 1048 XAHSXGAGFNVXYXXXGYSGVVLSC 1122
HS FN Y G G+ + C
Sbjct: 337 LCHSF-QSFNTSYTDTGLWGLYMVC 360
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,182,215
Number of Sequences: 237096
Number of extensions: 3190023
Number of successful extensions: 5607
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5604
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16458822770
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -