Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_M13
(1123 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 183 2e-46
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 183 2e-46
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 183 2e-46
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 183 2e-46
Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 163 2e-40
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 163 2e-40
Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical pr... 72 9e-13
AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein. 72 9e-13
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 33 0.28
AC006689-3|AAO21400.1| 310|Caenorhabditis elegans Hypothetical ... 32 0.64
AC006689-2|AAF39970.2| 341|Caenorhabditis elegans Hypothetical ... 32 0.64
AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical ... 32 0.85
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas... 31 1.5
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ... 31 1.5
Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical pr... 29 4.5
U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical ... 29 4.5
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 29 7.9
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 29 7.9
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 29 7.9
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 29 7.9
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 29 7.9
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 183 bits (446), Expect = 2e-46
Identities = 96/146 (65%), Positives = 106/146 (72%), Gaps = 1/146 (0%)
Frame = +1
Query: 235 PFFGVMGAASAIIFXXXXXXXXXXXXXXXXXXMSVMRPELIMKSIIPVVMAGIIAIYGLV 414
PFFG MGAASA IF M VMRPELIMKS+IPV+MAGII IYGLV
Sbjct: 15 PFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLV 74
Query: 415 VAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLF 591
VA+++ G + A Y L KGF HL AGL G GL AG+AIGIVGDAGVRGTAQQPRLF
Sbjct: 75 VAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLF 134
Query: 592 VGMILILIFAEVLGLYGLIVAIYLYT 669
VGMILILIF+EVLGLYG+IVA+ L T
Sbjct: 135 VGMILILIFSEVLGLYGMIVALILGT 160
Score = 34.7 bits (76), Expect = 0.12
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = +1
Query: 445 EPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAE 624
E A Y + G++ + G A G A VG + +P L + ++ +I A
Sbjct: 9 ERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVIPVIMAG 66
Query: 625 VLGLYGLIVAIYLYTK 672
++G+YGL+VA+ L K
Sbjct: 67 IIGIYGLVVAMVLKGK 82
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 183 bits (446), Expect = 2e-46
Identities = 96/146 (65%), Positives = 106/146 (72%), Gaps = 1/146 (0%)
Frame = +1
Query: 235 PFFGVMGAASAIIFXXXXXXXXXXXXXXXXXXMSVMRPELIMKSIIPVVMAGIIAIYGLV 414
PFFG MGAASA IF M VMRPELIMKS+IPV+MAGII IYGLV
Sbjct: 15 PFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLV 74
Query: 415 VAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLF 591
VA+++ G + A Y L KGF HL AGL G GL AG+AIGIVGDAGVRGTAQQPRLF
Sbjct: 75 VAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLF 134
Query: 592 VGMILILIFAEVLGLYGLIVAIYLYT 669
VGMILILIF+EVLGLYG+IVA+ L T
Sbjct: 135 VGMILILIFSEVLGLYGMIVALILGT 160
Score = 34.7 bits (76), Expect = 0.12
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = +1
Query: 445 EPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAE 624
E A Y + G++ + G A G A VG + +P L + ++ +I A
Sbjct: 9 ERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVIPVIMAG 66
Query: 625 VLGLYGLIVAIYLYTK 672
++G+YGL+VA+ L K
Sbjct: 67 IIGIYGLVVAMVLKGK 82
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 183 bits (446), Expect = 2e-46
Identities = 96/146 (65%), Positives = 106/146 (72%), Gaps = 1/146 (0%)
Frame = +1
Query: 235 PFFGVMGAASAIIFXXXXXXXXXXXXXXXXXXMSVMRPELIMKSIIPVVMAGIIAIYGLV 414
PFFG MGAASA IF M VMRPELIMKS+IPV+MAGII IYGLV
Sbjct: 15 PFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLV 74
Query: 415 VAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLF 591
VA+++ G + A Y L KGF HL AGL G GL AG+AIGIVGDAGVRGTAQQPRLF
Sbjct: 75 VAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLF 134
Query: 592 VGMILILIFAEVLGLYGLIVAIYLYT 669
VGMILILIF+EVLGLYG+IVA+ L T
Sbjct: 135 VGMILILIFSEVLGLYGMIVALILGT 160
Score = 34.7 bits (76), Expect = 0.12
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = +1
Query: 445 EPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAE 624
E A Y + G++ + G A G A VG + +P L + ++ +I A
Sbjct: 9 ERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVIPVIMAG 66
Query: 625 VLGLYGLIVAIYLYTK 672
++G+YGL+VA+ L K
Sbjct: 67 IIGIYGLVVAMVLKGK 82
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 183 bits (446), Expect = 2e-46
Identities = 96/146 (65%), Positives = 106/146 (72%), Gaps = 1/146 (0%)
Frame = +1
Query: 235 PFFGVMGAASAIIFXXXXXXXXXXXXXXXXXXMSVMRPELIMKSIIPVVMAGIIAIYGLV 414
PFFG MGAASA IF M VMRPELIMKS+IPV+MAGII IYGLV
Sbjct: 15 PFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLV 74
Query: 415 VAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLF 591
VA+++ G + A Y L KGF HL AGL G GL AG+AIGIVGDAGVRGTAQQPRLF
Sbjct: 75 VAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLF 134
Query: 592 VGMILILIFAEVLGLYGLIVAIYLYT 669
VGMILILIF+EVLGLYG+IVA+ L T
Sbjct: 135 VGMILILIFSEVLGLYGMIVALILGT 160
Score = 34.7 bits (76), Expect = 0.12
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = +1
Query: 445 EPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAE 624
E A Y + G++ + G A G A VG + +P L + ++ +I A
Sbjct: 9 ERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVIPVIMAG 66
Query: 625 VLGLYGLIVAIYLYTK 672
++G+YGL+VA+ L K
Sbjct: 67 IIGIYGLVVAMVLKGK 82
>Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 163 bits (397), Expect = 2e-40
Identities = 82/145 (56%), Positives = 100/145 (68%), Gaps = 1/145 (0%)
Frame = +1
Query: 232 GPFFGVMGAASAIIFXXXXXXXXXXXXXXXXXXMSVMRPELIMKSIIPVVMAGIIAIYGL 411
GPFFG +G SA+ F M+V RP+L+MK+IIPVVMAGI+AIYGL
Sbjct: 22 GPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIYGL 81
Query: 412 VVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRL 588
VVAV+++G ++ ANY + F GL G GL AG+AIGI GDAGVR +QQPR+
Sbjct: 82 VVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQPRM 141
Query: 589 FVGMILILIFAEVLGLYGLIVAIYL 663
FVGMILILIFAEVLGLYG+IVA+ L
Sbjct: 142 FVGMILILIFAEVLGLYGMIVALIL 166
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 163 bits (397), Expect = 2e-40
Identities = 82/145 (56%), Positives = 100/145 (68%), Gaps = 1/145 (0%)
Frame = +1
Query: 232 GPFFGVMGAASAIIFXXXXXXXXXXXXXXXXXXMSVMRPELIMKSIIPVVMAGIIAIYGL 411
GPFFG +G SA+ F M+V RP+L+MK+IIPVVMAGI+AIYGL
Sbjct: 22 GPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIYGL 81
Query: 412 VVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRL 588
VVAV+++G ++ ANY + F GL G GL AG+AIGI GDAGVR +QQPR+
Sbjct: 82 VVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQPRM 141
Query: 589 FVGMILILIFAEVLGLYGLIVAIYL 663
FVGMILILIFAEVLGLYG+IVA+ L
Sbjct: 142 FVGMILILIFAEVLGLYGMIVALIL 166
>Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical
protein T01H3.1 protein.
Length = 214
Score = 71.7 bits (168), Expect = 9e-13
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 14/121 (11%)
Frame = +1
Query: 337 VMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQE--PANYP------------LYKG 474
V P + K+++ ++ +AI+G+++A + G L E + P L G
Sbjct: 83 VKAPRIRTKNLVSIIFCEAVAIFGIIMAFVFVGKLAEFRREDLPDTEDGMAILARNLASG 142
Query: 475 FIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA 654
++ G GL VG S L G A+GIVG A P LFV +++I IFA +GL+G+I+
Sbjct: 143 YMIFGGGLTVGLSNLVCGLAVGIVGSGAAIADAANPALFVKILIIEIFASAIGLFGMIIG 202
Query: 655 I 657
I
Sbjct: 203 I 203
Score = 40.7 bits (91), Expect = 0.002
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +1
Query: 481 HLGAGLAVGFS----GLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 648
H+ AGL +GFS L AG+ I G + + G + PR+ ++ +IF E + ++G+I
Sbjct: 49 HMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGII 108
Query: 649 VAIYLYTK 672
+A K
Sbjct: 109 MAFVFVGK 116
>AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein.
Length = 214
Score = 71.7 bits (168), Expect = 9e-13
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 14/121 (11%)
Frame = +1
Query: 337 VMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQE--PANYP------------LYKG 474
V P + K+++ ++ +AI+G+++A + G L E + P L G
Sbjct: 83 VKAPRIRTKNLVSIIFCEAVAIFGIIMAFVFVGKLAEFRREDLPDTEDGMAILARNLASG 142
Query: 475 FIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA 654
++ G GL VG S L G A+GIVG A P LFV +++I IFA +GL+G+I+
Sbjct: 143 YMIFGGGLTVGLSNLVCGLAVGIVGSGAAIADAANPALFVKILIIEIFASAIGLFGMIIG 202
Query: 655 I 657
I
Sbjct: 203 I 203
Score = 40.7 bits (91), Expect = 0.002
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +1
Query: 481 HLGAGLAVGFS----GLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 648
H+ AGL +GFS L AG+ I G + + G + PR+ ++ +IF E + ++G+I
Sbjct: 49 HMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGII 108
Query: 649 VAIYLYTK 672
+A K
Sbjct: 109 MAFVFVGK 116
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 33.5 bits (73), Expect = 0.28
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 363 VDHSCRHGGYYCHLRSGRGCPDCWCPPG 446
V H C +GG+ + S R P C CP G
Sbjct: 1800 VGHECLNGGFCSYANSNRSLPHCICPSG 1827
>AC006689-3|AAO21400.1| 310|Caenorhabditis elegans Hypothetical
protein T22E7.1b protein.
Length = 310
Score = 32.3 bits (70), Expect = 0.64
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 462 GVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDR 364
GVVG +G+ D H+ T G N+ HD + D+
Sbjct: 12 GVVGAYAQGSCRTDQHEMTCRGKNSLHDLKKDQ 44
>AC006689-2|AAF39970.2| 341|Caenorhabditis elegans Hypothetical
protein T22E7.1a protein.
Length = 341
Score = 32.3 bits (70), Expect = 0.64
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 462 GVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDR 364
GVVG +G+ D H+ T G N+ HD + D+
Sbjct: 12 GVVGAYAQGSCRTDQHEMTCRGKNSLHDLKKDQ 44
>AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical
protein T01A4.1a protein.
Length = 1217
Score = 31.9 bits (69), Expect = 0.85
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -2
Query: 663 QVDGDDKSVKTQYFSENKNKNHSDE*PR---LLSSTTHACISHDAYGETGSQTRE 508
++DG++ K + K KNH+D P LL ST+ + ++ D + TR+
Sbjct: 511 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKRSSSSGTTRK 565
>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
protein.
Length = 1276
Score = 31.1 bits (67), Expect = 1.5
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2
Query: 663 QVDGDDKSVKTQYFSENKNKNHSDE*PR---LLSSTTHACISHDAYGE 529
++DG++ K + K KNH+D P LL ST+ + ++ D + E
Sbjct: 557 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKFDE 604
>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
protein T01A4.1c protein.
Length = 1276
Score = 31.1 bits (67), Expect = 1.5
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2
Query: 663 QVDGDDKSVKTQYFSENKNKNHSDE*PR---LLSSTTHACISHDAYGE 529
++DG++ K + K KNH+D P LL ST+ + ++ D + E
Sbjct: 557 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKFDE 604
>Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -3
Query: 563 RTPASPTMPMAKPAARPENPTAKPAPK 483
+TPA PT +AKPA +P P + PAPK
Sbjct: 47 KTPARPT--VAKPAPKP-TPKSAPAPK 70
>U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical
protein F32A5.2b protein.
Length = 859
Score = 29.5 bits (63), Expect = 4.5
Identities = 39/140 (27%), Positives = 54/140 (38%), Gaps = 3/140 (2%)
Frame = -3
Query: 635 RPNTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKPAPKWMNPL*RG* 456
RP T A R+R P L PR P T A P +RP P P +++
Sbjct: 82 RPATKAPNRMRRPPPRKLA--QTPRPPVVTTQRPAPPQSRP--PPVTRRPTFISTT---- 133
Query: 455 LAGSWRAPAIRTATTRP*MAIIPA--MTTGMIDFMISSGLITDMAAIPVPDLA-VPEAAP 285
+ S R ++T T RP PA T +I I P+P A VP+ AP
Sbjct: 134 TSNSRR---LQTVTRRPFANRRPAPRQRTNIIRPTIRPTPRVFTVTTPIPTFAFVPDIAP 190
Query: 284 KALKMIADAAPITPKKGPEI 225
+ P+T + P +
Sbjct: 191 -VTRFFVQRQPVTRRPLPAV 209
>AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -3
Query: 563 RTPASPTMPMAKPAARPENPTAKPAPK 483
+TPA PT +AKPA +P P + PAPK
Sbjct: 47 KTPARPT--VAKPAPKP-TPKSAPAPK 70
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
protein F32A5.2a protein.
Length = 1000
Score = 29.1 bits (62), Expect = 6.0
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -3
Query: 635 RPNTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKP 492
RP T A R+R P L PR P T A P +RP T +P
Sbjct: 82 RPATKAPNRMRRPPPRKLA--QTPRPPVVTTQRPAPPQSRPPPVTRRP 127
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 7.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 393 YCHLRSGRGCPDCWCPPGASQ 455
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 569 VPRTPASPTMPMAKPAARPENPTAKPAPK 483
VP P PT P +P RPE P +P P+
Sbjct: 96 VPPPPPPPTQPEPEPEPRPE-PQPEPQPE 123
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 28.7 bits (61), Expect = 7.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 375 CRHGGYYCHLRSGRGCPDCWCPPGASQ 455
C HG Y ++ SG GC +C C P S+
Sbjct: 915 CAHGFY--NITSGLGCQECNCDPLGSE 939
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 7.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 393 YCHLRSGRGCPDCWCPPGASQ 455
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 28.7 bits (61), Expect = 7.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 393 YCHLRSGRGCPDCWCPPGASQ 455
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,510,134
Number of Sequences: 27780
Number of extensions: 419157
Number of successful extensions: 1557
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1533
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3025992820
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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