Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_M11
         (1201 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.4  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    23   4.5  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   6.0  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   6.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   7.9  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 27   LLFIFLVVFXQSFASSLHLAXRLSQIAAXQQL 122
            L+F  L++  Q FA  +H     SQI    QL
Sbjct: 1288 LIFFALLMVIQFFAMMIHRFGTFSQIITKTQL 1319


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 27   LLFIFLVVFXQSFASSLHLAXRLSQIAAXQQL 122
            L+F  L++  Q FA  +H     SQI    QL
Sbjct: 1288 LIFFALLMVIQFFAMMIHRFGTFSQIITKTQL 1319


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 120 LVIIGWIASWLLVVALPRR 176
           +VII W++ WL   A P R
Sbjct: 81  IVIISWVSFWLNRNATPAR 99


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 468 NFTNKAFFSLH 436
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 468 NFTNKAFFSLH 436
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 435 FXCGLSXLIXVXYHVW 388
           F C +S L  +  HVW
Sbjct: 279 FLCNMSLLTVIPIHVW 294


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,145
Number of Sequences: 336
Number of extensions: 2721
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 34938740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)