Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_M11
         (1201 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069728-1|AAL39873.1|  245|Drosophila melanogaster LP03146p pro...    29   9.5  
AE013599-1733|AAF58364.1|  611|Drosophila melanogaster CG13330-P...    29   9.5  

>AY069728-1|AAL39873.1|  245|Drosophila melanogaster LP03146p
           protein.
          Length = 245

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
 Frame = -1

Query: 286 YTATTPNRLTGESICGLTC*XTTR---PKRAWRERXTRLCLRGNATTRSQEAIXP 131
           YT T+ +RL G + C L+   + R   P R    R TR+C    + + +  ++ P
Sbjct: 22  YTTTSDDRLPGMAFCDLSSRRSRRLENPTRPKERRKTRVCQDPRSVSSATRSLTP 76


>AE013599-1733|AAF58364.1|  611|Drosophila melanogaster CG13330-PA
           protein.
          Length = 611

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
 Frame = -1

Query: 286 YTATTPNRLTGESICGLTC*XTTR---PKRAWRERXTRLCLRGNATTRSQEAIXP 131
           YT T+ +RL G + C L+   + R   P R    R TR+C    + + +  ++ P
Sbjct: 388 YTTTSDDRLPGMAFCDLSSRRSRRLENPTRPKERRKTRVCQDPRSVSSATRSLTP 442


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,387,139
Number of Sequences: 53049
Number of extensions: 524236
Number of successful extensions: 858
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6356408760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)