Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_M07
(1333 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 37 0.037
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 37 0.037
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 36 0.064
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 36 0.064
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 35 0.11
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 35 0.11
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 35 0.11
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.15
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.15
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 34 0.26
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.26
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.26
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 34 0.26
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.26
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.26
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 34 0.26
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 34 0.26
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.26
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 33 0.34
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 33 0.60
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 33 0.60
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 32 0.79
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 32 0.79
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 32 1.0
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 31 1.4
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 31 1.4
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 31 1.4
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 31 1.8
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 31 2.4
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 31 2.4
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 2.4
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 31 2.4
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 31 2.4
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 31 2.4
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 31 2.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 2.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 2.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 2.4
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 31 2.4
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 3.2
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 3.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 3.2
AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical... 30 3.2
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 30 4.2
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 29 5.6
U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 5.6
M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein ( C.ele... 29 5.6
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 5.6
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 7.4
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 29 7.4
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 29 7.4
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 7.4
U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter... 29 9.8
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 29 9.8
L12706-1|AAA17398.2| 360|Caenorhabditis elegans collagen protein. 29 9.8
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 9.8
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 9.8
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 36.7 bits (81), Expect = 0.037
Identities = 23/82 (28%), Positives = 23/82 (28%), Gaps = 1/82 (1%)
Frame = -2
Query: 714 PPGXXGXXGXXXPXGGPX-PXXEXXPXGXPTGXXXPXTNPPXXPAPXXXPPXXXEXXXXX 538
PPG G G G P P P PT P T PP P P P
Sbjct: 108 PPGPAGVPGKPGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAPG 167
Query: 537 XPXXXRXPXXPAXXXXKXRPXP 472
P P P P P
Sbjct: 168 DPGEAGTPGRPGTDATPGLPGP 189
Score = 30.3 bits (65), Expect = 3.2
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -2
Query: 714 PPGXXGXXGXXXPXGGPXPXXEXXPXGXPTGXXXPXTNPPXXPAPXXXP 568
PPG G G P G P P P G P G PP P P
Sbjct: 233 PPGPPGAPGNDGPPGPPGPKGSPGPDG-PAGVDG-QAGPPGPPGQAGTP 279
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 36.7 bits (81), Expect = 0.037
Identities = 23/82 (28%), Positives = 23/82 (28%), Gaps = 1/82 (1%)
Frame = -2
Query: 714 PPGXXGXXGXXXPXGGPX-PXXEXXPXGXPTGXXXPXTNPPXXPAPXXXPPXXXEXXXXX 538
PPG G G G P P P PT P T PP P P P
Sbjct: 108 PPGPAGVPGKPGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAPG 167
Query: 537 XPXXXRXPXXPAXXXXKXRPXP 472
P P P P P
Sbjct: 168 DPGEAGTPGRPGTDATPGLPGP 189
Score = 30.3 bits (65), Expect = 3.2
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -2
Query: 714 PPGXXGXXGXXXPXGGPXPXXEXXPXGXPTGXXXPXTNPPXXPAPXXXP 568
PPG G G P G P P P G P G PP P P
Sbjct: 233 PPGPPGAPGNDGPPGPPGPKGSPGPDG-PAGVDG-QAGPPGPPGQAGTP 279
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 35.9 bits (79), Expect = 0.064
Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Frame = -2
Query: 726 PGXXPPGXXGXXGXXXPXGGPXPXX--EXXPXGXPTGXXXPXTNPPXXPAPXXXPP 565
P PPG G G G P P E P G PTG P PP P P
Sbjct: 177 PSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNP 232
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 2/56 (3%)
Frame = -2
Query: 726 PGXXPPGXXGXXGXXXPXGGPXPXXEXX--PXGXPTGXXXPXTNPPXXPAPXXXPP 565
P PPG G G P P P G P G P PP P P
Sbjct: 222 PSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDP 277
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 2/56 (3%)
Frame = -2
Query: 726 PGXXPPGXXGXXGXXXPXGGPXPXXEXX--PXGXPTGXXXPXTNPPXXPAPXXXPP 565
P PPG G G P P P G P G P PP P P
Sbjct: 252 PSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDP 307
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 2/56 (3%)
Frame = -2
Query: 726 PGXXPPGXXGXXGXXXPXGGPXPXXEXX--PXGXPTGXXXPXTNPPXXPAPXXXPP 565
P PPG G G P P P G P G P PP P P
Sbjct: 312 PSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDP 367
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 2/56 (3%)
Frame = -2
Query: 726 PGXXPPGXXGXXGXXXPXGGPXPXXEXX--PXGXPTGXXXPXTNPPXXPAPXXXPP 565
P PPG G G P P P G P G P PP P P
Sbjct: 342 PSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDP 397
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 2/56 (3%)
Frame = -2
Query: 726 PGXXPPGXXGXXGXXXPXGGPXPXXEXX--PXGXPTGXXXPXTNPPXXPAPXXXPP 565
P PPG G G P P P G P G P PP P P
Sbjct: 432 PSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDP 487
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 2/56 (3%)
Frame = -2
Query: 726 PGXXPPGXXGXXGXXXPXGGPXPXXEXX--PXGXPTGXXXPXTNPPXXPAPXXXPP 565
P PPG G G P P P G P G P PP P P
Sbjct: 462 PSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDP 517
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/55 (30%), Positives = 17/55 (30%), Gaps = 2/55 (3%)
Frame = -2
Query: 726 PGXXPPGXXGXXGXXXPXGGPXPXXEXX--PXGXPTGXXXPXTNPPXXPAPXXXP 568
P PPG G G P P P G P G P PP P P
Sbjct: 477 PSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGMPPVPLP 531
Score = 28.7 bits (61), Expect = 9.8
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 2/56 (3%)
Frame = -2
Query: 726 PGXXPPGXXGXXGXXXPXGGPXPXXEXX--PXGXPTGXXXPXTNPPXXPAPXXXPP 565
P PPG G G P P P G P G P PP P P
Sbjct: 282 PSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDP 337
Score = 28.7 bits (61), Expect = 9.8
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 2/56 (3%)
Frame = -2
Query: 726 PGXXPPGXXGXXGXXXPXGGPXPXXEXX--PXGXPTGXXXPXTNPPXXPAPXXXPP 565
P PPG G G P P P G P G P PP P P
Sbjct: 402 PSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNP 457
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 35.9 bits (79), Expect = 0.064
Identities = 20/70 (28%), Positives = 21/70 (30%)
Frame = -1
Query: 610 PNQPXXXXRPXPXXXPXPRXXXXXPXPXPPXXXXARXXXXKXPPXPPDXPXEXRXEXXKG 431
P P P P P P P P PP A PP PP P + G
Sbjct: 472 PAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPPALEQEISG 531
Query: 430 XSTQTXTPNP 401
T T P
Sbjct: 532 PPTVRLTAVP 541
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 35.1 bits (77), Expect = 0.11
Identities = 22/82 (26%), Positives = 22/82 (26%), Gaps = 1/82 (1%)
Frame = -2
Query: 714 PPGXXGXXGXXXPXGGPX-PXXEXXPXGXPTGXXXPXTNPPXXPAPXXXPPXXXEXXXXX 538
PPG G G G P P P P P T PP P P P
Sbjct: 106 PPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPG 165
Query: 537 XPXXXRXPXXPAXXXXKXRPXP 472
P P P P P
Sbjct: 166 DPGEAGTPGRPGTDAAPGSPGP 187
Score = 34.3 bits (75), Expect = 0.20
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = -2
Query: 744 PXXXXXPGXXPPGXXGXXGXXXPXGGPXPXXEXXPXGXPTGXXXPXTNPPXXPAPXXXP 568
P PG PPG G G P G P P P G P + PP P P P
Sbjct: 223 PGDSGPPG--PPGPPGAPGNDGPPGPPGPKGAPGPDGPP--GVDGQSGPPGPPGPAGTP 277
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 35.1 bits (77), Expect = 0.11
Identities = 22/82 (26%), Positives = 22/82 (26%), Gaps = 1/82 (1%)
Frame = -2
Query: 714 PPGXXGXXGXXXPXGGPX-PXXEXXPXGXPTGXXXPXTNPPXXPAPXXXPPXXXEXXXXX 538
PPG G G G P P P P P T PP P P P
Sbjct: 101 PPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPG 160
Query: 537 XPXXXRXPXXPAXXXXKXRPXP 472
P P P P P
Sbjct: 161 DPGEAGTPGRPGTDAAPGSPGP 182
Score = 34.7 bits (76), Expect = 0.15
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = -2
Query: 744 PXXXXXPGXXPPGXXGXXGXXXPXGGPXPXXEXXPXGXPTGXXXPXTNPPXXPAPXXXP 568
P PG PPG G G P G P P P G P + PP P P P
Sbjct: 218 PGDSGPPG--PPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADG--QSGPPGPPGPAGTP 272
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 35.1 bits (77), Expect = 0.11
Identities = 22/82 (26%), Positives = 22/82 (26%), Gaps = 1/82 (1%)
Frame = -2
Query: 714 PPGXXGXXGXXXPXGGPX-PXXEXXPXGXPTGXXXPXTNPPXXPAPXXXPPXXXEXXXXX 538
PPG G G G P P P P P T PP P P P
Sbjct: 101 PPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPG 160
Query: 537 XPXXXRXPXXPAXXXXKXRPXP 472
P P P P P
Sbjct: 161 DPGEAGTPGRPGTDAAPGSPGP 182
Score = 34.7 bits (76), Expect = 0.15
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = -2
Query: 744 PXXXXXPGXXPPGXXGXXGXXXPXGGPXPXXEXXPXGXPTGXXXPXTNPPXXPAPXXXP 568
P PG PPG G G P G P P P G P + PP P P P
Sbjct: 218 PGDSGPPG--PPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADG--QSGPPGPPGPAGTP 272
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.7 bits (76), Expect = 0.15
Identities = 28/102 (27%), Positives = 28/102 (27%), Gaps = 5/102 (4%)
Frame = -1
Query: 751 PXPPPGXPXXGXPPXGXGXXXXXXPXRXPPPXXXXXPXRXXDRGXXTPNQPXXXXRPXPX 572
P PPP P G P PPP P G P P P
Sbjct: 272 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMG 331
Query: 571 XXPXP-----RXXXXXPXPXPPXXXXARXXXXKXPPXPPDXP 461
P P R P P PP A PP PP P
Sbjct: 332 GMPPPPPPGMRYPGGMPPPPPPRYPSA--GPGMYPPPPPSRP 371
Score = 34.3 bits (75), Expect = 0.20
Identities = 27/102 (26%), Positives = 27/102 (26%), Gaps = 2/102 (1%)
Frame = -1
Query: 760 GXXPXPPPGXPXXGXPPXGXGXXXXXXPXRXPPPXXXXXPXRXXDRGXXTPNQPXXXXRP 581
G P PP P P P PPP P TP P P
Sbjct: 258 GQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP 317
Query: 580 XPXXXP--XPRXXXXXPXPXPPXXXXARXXXXKXPPXPPDXP 461
P P P P PP R PP PP P
Sbjct: 318 PPPPPSRFGPPGMGGMPPPPPP---GMRYPGGMPPPPPPRYP 356
Score = 30.3 bits (65), Expect = 3.2
Identities = 20/64 (31%), Positives = 20/64 (31%), Gaps = 1/64 (1%)
Frame = -1
Query: 787 RXXXPXXGXGXXPXPPPGXPXXGX-PPXGXGXXXXXXPXRXPPPXXXXXPXRXXDRGXXT 611
R P G G P PPPG G PP P PPP P G
Sbjct: 324 RFGPPGMG-GMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIP 382
Query: 610 PNQP 599
P P
Sbjct: 383 PPPP 386
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.7 bits (76), Expect = 0.15
Identities = 28/102 (27%), Positives = 28/102 (27%), Gaps = 5/102 (4%)
Frame = -1
Query: 751 PXPPPGXPXXGXPPXGXGXXXXXXPXRXPPPXXXXXPXRXXDRGXXTPNQPXXXXRPXPX 572
P PPP P G P PPP P G P P P
Sbjct: 282 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMG 341
Query: 571 XXPXP-----RXXXXXPXPXPPXXXXARXXXXKXPPXPPDXP 461
P P R P P PP A PP PP P
Sbjct: 342 GMPPPPPPGMRYPGGMPPPPPPRYPSA--GPGMYPPPPPSRP 381
Score = 34.3 bits (75), Expect = 0.20
Identities = 27/102 (26%), Positives = 27/102 (26%), Gaps = 2/102 (1%)
Frame = -1
Query: 760 GXXPXPPPGXPXXGXPPXGXGXXXXXXPXRXPPPXXXXXPXRXXDRGXXTPNQPXXXXRP 581
G P PP P P P PPP P TP P P
Sbjct: 268 GQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP 327
Query: 580 XPXXXP--XPRXXXXXPXPXPPXXXXARXXXXKXPPXPPDXP 461
P P P P PP R PP PP P
Sbjct: 328 PPPPPSRFGPPGMGGMPPPPPP---GMRYPGGMPPPPPPRYP 366
Score = 30.3 bits (65), Expect = 3.2
Identities = 20/64 (31%), Positives = 20/64 (31%), Gaps = 1/64 (1%)
Frame = -1
Query: 787 RXXXPXXGXGXXPXPPPGXPXXGX-PPXGXGXXXXXXPXRXPPPXXXXXPXRXXDRGXXT 611
R P G G P PPPG G PP P PPP P G
Sbjct: 334 RFGPPGMG-GMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIP 392
Query: 610 PNQP 599
P P
Sbjct: 393 PPPP 396
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 33.9 bits (74), Expect = 0.26
Identities = 22/83 (26%), Positives = 23/83 (27%), Gaps = 1/83 (1%)
Frame = -2
Query: 714 PPGXXGXXGXXXPXGGPX-PXXEXXPXGXPTGXXXPXTNPPXXPAPXXXPPXXXEXXXXX 538
PPG G G G P P P + P T PP P P P
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPG 165
Query: 537 XPXXXRXPXXPAXXXXKXRPXPP 469
P P PA PP
Sbjct: 166 PPGPDGNPGSPAGPSGPGPAGPP 188
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.9 bits (74), Expect = 0.26
Identities = 36/147 (24%), Positives = 38/147 (25%)
Frame = +3
Query: 336 GGXXGGGXGGFXWXXXXGXXXXXXXXXXXXXXXXXXSXLXSXGXSGGXGGLXLXXXRAXX 515
GG GGG GG G G GG GG +
Sbjct: 87 GGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGG 146
Query: 516 XXGGXGXGFXXXXLGXGXXXGXGRXXWXGWXGVXXPRSXXLXGXXXXXGGGXRXGXXXXX 695
GG G G G G G G + G GGG G
Sbjct: 147 CGGGSSGGCGGG--GGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAV 204
Query: 696 XPXPXGGXPXXGXPGGGXGXXPXPXXG 776
P GG G GGG G P G
Sbjct: 205 APSGGGGCGGGGSSGGG-GYASAPSGG 230
Score = 30.3 bits (65), Expect = 3.2
Identities = 21/65 (32%), Positives = 21/65 (32%)
Frame = +3
Query: 558 GXGXXXGXGRXXWXGWXGVXXPRSXXLXGXXXXXGGGXRXGXXXXXXPXPXGGXPXXGXP 737
G G G G G G P G GGG G P P GG G
Sbjct: 29 GGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGG--GCGGG 86
Query: 738 GGGXG 752
GGG G
Sbjct: 87 GGGCG 91
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.9 bits (74), Expect = 0.26
Identities = 36/147 (24%), Positives = 38/147 (25%)
Frame = +3
Query: 336 GGXXGGGXGGFXWXXXXGXXXXXXXXXXXXXXXXXXSXLXSXGXSGGXGGLXLXXXRAXX 515
GG GGG GG G G GG GG +
Sbjct: 87 GGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGG 146
Query: 516 XXGGXGXGFXXXXLGXGXXXGXGRXXWXGWXGVXXPRSXXLXGXXXXXGGGXRXGXXXXX 695
GG G G G G G G + G GGG G
Sbjct: 147 CGGGSSGGCGGG--GGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAV 204
Query: 696 XPXPXGGXPXXGXPGGGXGXXPXPXXG 776
P GG G GGG G P G
Sbjct: 205 APSGGGGCGGGGSSGGG-GYASAPSGG 230
Score = 30.3 bits (65), Expect = 3.2
Identities = 21/65 (32%), Positives = 21/65 (32%)
Frame = +3
Query: 558 GXGXXXGXGRXXWXGWXGVXXPRSXXLXGXXXXXGGGXRXGXXXXXXPXPXGGXPXXGXP 737
G G G G G G P G GGG G P P GG G
Sbjct: 29 GGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGG--GCGGG 86
Query: 738 GGGXG 752
GGG G
Sbjct: 87 GGGCG 91
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 33.9 bits (74), Expect = 0.26
Identities = 22/83 (26%), Positives = 23/83 (27%), Gaps = 1/83 (1%)
Frame = -2
Query: 714 PPGXXGXXGXXXPXGGPX-PXXEXXPXGXPTGXXXPXTNPPXXPAPXXXPPXXXEXXXXX 538
PPG G G G P P P + P T PP P P P
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPG 165
Query: 537 XPXXXRXPXXPAXXXXKXRPXPP 469
P P PA PP
Sbjct: 166 PPGPDGNPGSPAGPSGPGPAGPP 188
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.9 bits (74), Expect = 0.26
Identities = 22/78 (28%), Positives = 22/78 (28%), Gaps = 1/78 (1%)
Frame = -1
Query: 751 PXPPPGXPXX-GXPPXGXGXXXXXXPXRXPPPXXXXXPXRXXDRGXXTPNQPXXXXRPXP 575
P PPPG P G PP PPP G P P P P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 574 XXXPXPRXXXXXPXPXPP 521
P P P PP
Sbjct: 773 PPPPPGGFKGGPPPPPPP 790
Score = 32.7 bits (71), Expect = 0.60
Identities = 17/60 (28%), Positives = 17/60 (28%)
Frame = -3
Query: 680 PPPXAPXPXXXXAXQGXRPGXXNPXPTXPXXPPXPXXXPXXXXXXPKXXPXPXAXXXXPP 501
PPP P PG P P PP P P P P P PP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 31.5 bits (68), Expect = 1.4
Identities = 21/79 (26%), Positives = 22/79 (27%), Gaps = 1/79 (1%)
Frame = -2
Query: 690 GXXXPXGGPXPXXEXXPXGXPTGXXXPXTN-PPXXPAPXXXPPXXXEXXXXXXPXXXRXP 514
G P G P P P G P T PP P P PP P P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 513 XXPAXXXXKXRPXPPTXXP 457
P + PP P
Sbjct: 771 PPPPPPPGGFKGGPPPPPP 789
Score = 30.3 bits (65), Expect = 3.2
Identities = 22/87 (25%), Positives = 22/87 (25%)
Frame = -1
Query: 730 PXXGXPPXGXGXXXXXXPXRXPPPXXXXXPXRXXDRGXXTPNQPXXXXRPXPXXXPXPRX 551
P G PP G PPP P G P P P P P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPIT----GGPPPPPPPGGLPPISGGPPPPPP 763
Query: 550 XXXXPXPXPPXXXXARXXXXKXPPXPP 470
P PP PP PP
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.9 bits (74), Expect = 0.26
Identities = 22/78 (28%), Positives = 22/78 (28%), Gaps = 1/78 (1%)
Frame = -1
Query: 751 PXPPPGXPXX-GXPPXGXGXXXXXXPXRXPPPXXXXXPXRXXDRGXXTPNQPXXXXRPXP 575
P PPPG P G PP PPP G P P P P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 574 XXXPXPRXXXXXPXPXPP 521
P P P PP
Sbjct: 773 PPPPPGGFKGGPPPPPPP 790
Score = 32.7 bits (71), Expect = 0.60
Identities = 17/60 (28%), Positives = 17/60 (28%)
Frame = -3
Query: 680 PPPXAPXPXXXXAXQGXRPGXXNPXPTXPXXPPXPXXXPXXXXXXPKXXPXPXAXXXXPP 501
PPP P PG P P PP P P P P P PP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 31.5 bits (68), Expect = 1.4
Identities = 21/79 (26%), Positives = 22/79 (27%), Gaps = 1/79 (1%)
Frame = -2
Query: 690 GXXXPXGGPXPXXEXXPXGXPTGXXXPXTN-PPXXPAPXXXPPXXXEXXXXXXPXXXRXP 514
G P G P P P G P T PP P P PP P P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 513 XXPAXXXXKXRPXPPTXXP 457
P + PP P
Sbjct: 771 PPPPPPPGGFKGGPPPPPP 789
Score = 30.3 bits (65), Expect = 3.2
Identities = 22/87 (25%), Positives = 22/87 (25%)
Frame = -1
Query: 730 PXXGXPPXGXGXXXXXXPXRXPPPXXXXXPXRXXDRGXXTPNQPXXXXRPXPXXXPXPRX 551
P G PP G PPP P G P P P P P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPIT----GGPPPPPPPGGLPPISGGPPPPPP 763
Query: 550 XXXXPXPXPPXXXXARXXXXKXPPXPP 470
P PP PP PP
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 33.9 bits (74), Expect = 0.26
Identities = 22/83 (26%), Positives = 23/83 (27%), Gaps = 1/83 (1%)
Frame = -2
Query: 714 PPGXXGXXGXXXPXGGPX-PXXEXXPXGXPTGXXXPXTNPPXXPAPXXXPPXXXEXXXXX 538
PPG G G G P P P + P T PP P P P
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPG 165
Query: 537 XPXXXRXPXXPAXXXXKXRPXPP 469
P P PA PP
Sbjct: 166 PPGPDGNPGSPAGPSGPGPAGPP 188
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 33.9 bits (74), Expect = 0.26
Identities = 22/83 (26%), Positives = 23/83 (27%), Gaps = 1/83 (1%)
Frame = -2
Query: 714 PPGXXGXXGXXXPXGGPX-PXXEXXPXGXPTGXXXPXTNPPXXPAPXXXPPXXXEXXXXX 538
PPG G G G P P P + P T PP P P P
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPG 165
Query: 537 XPXXXRXPXXPAXXXXKXRPXPP 469
P P PA PP
Sbjct: 166 PPGPDGNPGSPAGPSGPGPAGPP 188
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.9 bits (74), Expect = 0.26
Identities = 22/78 (28%), Positives = 22/78 (28%), Gaps = 1/78 (1%)
Frame = -1
Query: 751 PXPPPGXPXX-GXPPXGXGXXXXXXPXRXPPPXXXXXPXRXXDRGXXTPNQPXXXXRPXP 575
P PPPG P G PP PPP G P P P P
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Query: 574 XXXPXPRXXXXXPXPXPP 521
P P P PP
Sbjct: 356 PPPPPGGFKGGPPPPPPP 373
Score = 32.7 bits (71), Expect = 0.60
Identities = 17/60 (28%), Positives = 17/60 (28%)
Frame = -3
Query: 680 PPPXAPXPXXXXAXQGXRPGXXNPXPTXPXXPPXPXXXPXXXXXXPKXXPXPXAXXXXPP 501
PPP P PG P P PP P P P P P PP
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Score = 31.5 bits (68), Expect = 1.4
Identities = 21/79 (26%), Positives = 22/79 (27%), Gaps = 1/79 (1%)
Frame = -2
Query: 690 GXXXPXGGPXPXXEXXPXGXPTGXXXPXTN-PPXXPAPXXXPPXXXEXXXXXXPXXXRXP 514
G P G P P P G P T PP P P PP P P
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
Query: 513 XXPAXXXXKXRPXPPTXXP 457
P + PP P
Sbjct: 354 PPPPPPPGGFKGGPPPPPP 372
Score = 30.3 bits (65), Expect = 3.2
Identities = 22/87 (25%), Positives = 22/87 (25%)
Frame = -1
Query: 730 PXXGXPPXGXGXXXXXXPXRXPPPXXXXXPXRXXDRGXXTPNQPXXXXRPXPXXXPXPRX 551
P G PP G PPP P G P P P P P
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPIT----GGPPPPPPPGGLPPISGGPPPPPP 346
Query: 550 XXXXPXPXPPXXXXARXXXXKXPPXPP 470
P PP PP PP
Sbjct: 347 PPGGCPPPPPPPPPGGFKGGPPPPPPP 373
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 33.5 bits (73), Expect = 0.34
Identities = 24/83 (28%), Positives = 24/83 (28%), Gaps = 1/83 (1%)
Frame = -2
Query: 714 PPGXXGXXGXXXPXGGPXPXXEXXPXGXPTG-XXXPXTNPPXXPAPXXXPPXXXEXXXXX 538
PPG G G G P G PTG P T PP P P P E
Sbjct: 114 PPGTPGPAGRPGKPGRPGACGNHGNPGKPTGLPCDPVTVPPCKPCP---PGPAGEPGHDG 170
Query: 537 XPXXXRXPXXPAXXXXKXRPXPP 469
P P P P P
Sbjct: 171 APGAPGKPGAPGVGGGSGAPGAP 193
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 32.7 bits (71), Expect = 0.60
Identities = 25/100 (25%), Positives = 26/100 (26%)
Frame = -2
Query: 723 GXXPPGXXGXXGXXXPXGGPXPXXEXXPXGXPTGXXXPXTNPPXXPAPXXXPPXXXEXXX 544
G PPG G G P G P E G P P P P P +
Sbjct: 181 GDAPPGEAGPKGPPGPPGSPGAPGEP---GRPGDDAPSEPLIPGEPGPQGPPGPPGQAGP 237
Query: 543 XXXPXXXRXPXXPAXXXXKXRPXPPTXXPKXGXKXXKGXA 424
P P P P P K G G A
Sbjct: 238 DGQPGAPGGPGTPGSKGPPGNPGAPGADGKPGAPGQAGPA 277
Score = 28.7 bits (61), Expect = 9.8
Identities = 17/57 (29%), Positives = 18/57 (31%), Gaps = 4/57 (7%)
Frame = -2
Query: 744 PXXXXXPGXXPPGXXGXXGXXXPXGGPXPXXEXXPXGXPTGXXXPXT----NPPXXP 586
P PG P G P G P P + P G P P T PP P
Sbjct: 203 PGEPGRPGDDAPSEPLIPGEPGPQGPPGPPGQAGPDGQPGAPGGPGTPGSKGPPGNP 259
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 32.7 bits (71), Expect = 0.60
Identities = 22/83 (26%), Positives = 23/83 (27%), Gaps = 1/83 (1%)
Frame = -2
Query: 714 PPGXXGXXGXXXPXGGPXPXXEXXPXGXPTGXXXPXTNPPXXPAPXXXPPXXXEXXXXXX 535
PPG G G P G P P P+G PP P P P
Sbjct: 176 PPGPAGPAGGPGPAGPPGP--AGADGNTPSGGGEGPAGPPGPPGPAGNPGTDGAPGNPGA 233
Query: 534 P-XXXRXPXXPAXXXXKXRPXPP 469
P P P P PP
Sbjct: 234 PGQVTETPGTPGPAGAAGPPGPP 256
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 32.3 bits (70), Expect = 0.79
Identities = 23/100 (23%), Positives = 26/100 (26%), Gaps = 3/100 (3%)
Frame = -1
Query: 751 PXPPPGXPXXGXPPXGXGXXXXXXPXRXPPPXXXXXPXRXXDRGXXTPNQPXXXXRPXPX 572
P P P P P G P P P P P++P P
Sbjct: 176 PSPGPVDPSEDPQPSGSSSPGPVDPSDEPSPSGPPSPGPVDPSEDPKPSEPPSPGPVDPS 235
Query: 571 XXPXPRXXXXXPXPXPP---XXXXARXXXXKXPPXPPDXP 461
P P P P P + PP PP P
Sbjct: 236 DEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGPP 275
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 32.3 bits (70), Expect = 0.79
Identities = 27/102 (26%), Positives = 32/102 (31%), Gaps = 5/102 (4%)
Frame = +3
Query: 462 GXSGGXGGLXLXXXRAXXXXGGXGXGFXXXXLGXGXXXGXGRXXWXGWX---GVXXPRSX 632
G GG GG + GG G+ +G G G G + G G
Sbjct: 139 GMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGG 198
Query: 633 XLXGXXXXXGG--GXRXGXXXXXXPXPXGGXPXXGXPGGGXG 752
+ G GG G G P GG PGGG G
Sbjct: 199 GMGGGGYGGGGMGGGGYGGGGDGGYGPSGGYGGGYGPGGGYG 240
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 31.9 bits (69), Expect = 1.0
Identities = 28/112 (25%), Positives = 30/112 (26%), Gaps = 7/112 (6%)
Frame = -2
Query: 744 PXXXXXPGXX-PPGXXGXXGXXXPXGGPXPXXEXXPXGXP--TGXXX----PXTNPPXXP 586
P PG PPG G G G P P P G P G P + P P
Sbjct: 146 PGQPGIPGDNGPPGEQGPKGPDAAPGEPGPKGPIGPPGPPGQAGAPGEPGSPAKSEPAVP 205
Query: 585 APXXXPPXXXEXXXXXXPXXXRXPXXPAXXXXKXRPXPPTXXPKXGXKXXKG 430
P P + P P K P P K G G
Sbjct: 206 GPPGPPGQAGQQGPPGPPGSNGIDGAPGAPGAKGEPGTPGEPGKDGEPGKPG 257
Score = 30.3 bits (65), Expect = 3.2
Identities = 23/89 (25%), Positives = 25/89 (28%), Gaps = 3/89 (3%)
Frame = -2
Query: 714 PPGXXGXXGXXXPXGGP-XPXXEXXPXGXPTGXXXPXTNPPXXPAP--XXXPPXXXEXXX 544
P G G G G P P P P P T PP P P PP
Sbjct: 94 PQGPQGTPGKPGKPGKPGAPGQPGTPGRPPQQPCEPTTPPPCQPCPQGPPGPPGQPGIPG 153
Query: 543 XXXPXXXRXPXXPAXXXXKXRPXPPTXXP 457
P + P P + P P P
Sbjct: 154 DNGPPGEQGPKGPDAAPGEPGPKGPIGPP 182
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 31.5 bits (68), Expect = 1.4
Identities = 27/127 (21%), Positives = 33/127 (25%)
Frame = -1
Query: 739 PGXPXXGXPPXGXGXXXXXXPXRXPPPXXXXXPXRXXDRGXXTPNQPXXXXRPXPXXXPX 560
P P P G P + P P P G PN+P RP P
Sbjct: 1215 PNEPSDPNKPGPNGSNGPSDPNK-PGPNGPNGPSDPNKPGPNGPNEPSDPNRPGPNGPNG 1273
Query: 559 PRXXXXXPXPXPPXXXXARXXXXKXPPXPPDXPXEXRXEXXKGXSTQTXTPNPXPXXPXS 380
P P P K P P+ P + G + + P P P
Sbjct: 1274 P----LDPNKPGPNGPNGPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGPNGPNG 1329
Query: 379 XXXXKPP 359
P
Sbjct: 1330 PSDPNKP 1336
Score = 30.7 bits (66), Expect = 2.4
Identities = 28/132 (21%), Positives = 34/132 (25%), Gaps = 3/132 (2%)
Frame = -1
Query: 745 PPPGXPXXGXP-PXGXGXXXXXXPX--RXPPPXXXXXPXRXXDRGXXTPNQPXXXXRPXP 575
P P P P P G P P P P G PN+P +P P
Sbjct: 1027 PSPNGPTPNWPSPNGPSPNGPNGPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGP 1086
Query: 574 XXXPXPRXXXXXPXPXPPXXXXARXXXXKXPPXPPDXPXEXRXEXXKGXSTQTXTPNPXP 395
P P P K P P+ P + G + + P P
Sbjct: 1087 NGPNGP----SDPNKPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGP 1142
Query: 394 XXPXSXXXXKPP 359
P P
Sbjct: 1143 NGPNGPSDPNKP 1154
Score = 29.9 bits (64), Expect = 4.2
Identities = 27/131 (20%), Positives = 32/131 (24%), Gaps = 2/131 (1%)
Frame = -1
Query: 745 PPPGXPXXGXPPXGXGXXXXXXPX--RXPPPXXXXXPXRXXDRGXXTPNQPXXXXRPXPX 572
P P P P G P P P P G PN+P +P P
Sbjct: 1168 PGPNGPNESSDPNKPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGPN 1227
Query: 571 XXPXPRXXXXXPXPXPPXXXXARXXXXKXPPXPPDXPXEXRXEXXKGXSTQTXTPNPXPX 392
P P P K P P+ P + G + P P
Sbjct: 1228 GSNGP----SDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNRPGPNGPNGPLDPNKPGPN 1283
Query: 391 XPXSXXXXKPP 359
P P
Sbjct: 1284 GPNGPSDPNKP 1294
Score = 29.1 bits (62), Expect = 7.4
Identities = 23/79 (29%), Positives = 25/79 (31%), Gaps = 2/79 (2%)
Frame = -1
Query: 751 PXPPPGXPXXGXP-PXGXGXXXXXXPXRXPPPXXXXXPXRXXDRGXXTPNQPXXXXRPXP 575
P P PG P G P P G P P P P G PN P +P P
Sbjct: 936 PKPNPG-PGPGPPSPNGPSDPNKPSP-NGPSPNGPNGPSDPNKPGPSGPNGPSDPNKPSP 993
Query: 574 XXXPXP-RXXXXXPXPXPP 521
P + P P P
Sbjct: 994 NGPSDPVKPSPSGPSPNGP 1012
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 31.5 bits (68), Expect = 1.4
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +2
Query: 569 GXXXGAGXXGGL-VXGXXXPVGXPXGXXSXXGXGPPXGXXXPXXPXSPGGXXPG 727
G G GGL G G P G G P G P P +PGG G
Sbjct: 101 GGPGNPGGPGGLGTPGGPGTPGGPGNPGGLGGPGNPGGPGTPGGPGTPGGQPHG 154
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 31.5 bits (68), Expect = 1.4
Identities = 24/93 (25%), Positives = 26/93 (27%), Gaps = 4/93 (4%)
Frame = -2
Query: 723 GXXPPGXXGXXGXXXPXGGPXPXXEXXPXGXPTGXXXPXTNPPXXPAPXXXP----PXXX 556
G PG G G P G P P G P TN P P P P P
Sbjct: 196 GYAEPGPAGPAGPPGPDGQPGAPG---PDGQPGAGGTTSTNQPGPPGPAGPPGPAGPAGE 252
Query: 555 EXXXXXXPXXXRXPXXPAXXXXKXRPXPPTXXP 457
+ P P P + P P P
Sbjct: 253 DAYAQPSPAGTPGPPGPPGKDGEAGPDGPAGAP 285
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 31.1 bits (67), Expect = 1.8
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = -1
Query: 610 PNQPXXXXRPXPXXXPXPRXXXXXPXPXPPXXXXARXXXXKXPPXPP 470
P P P P P P P P PP A PP PP
Sbjct: 465 PAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPP 511
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Frame = -2
Query: 714 PPGXXGXXGXXXPXGGPX-PXXEXXPXGXPTGXXXPXTNPPXXPAPXXXP 568
PPG G G G P P P P P T PP P P P
Sbjct: 104 PPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPP 153
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = -2
Query: 714 PPGXXGXXGXXXPXGGPXPXXEXXPXGXPTGXXXPXTNPPXXP 586
PPG G G G P P P G P P P P
Sbjct: 229 PPGSPGQPGADGSPGQPGPKGPNGPDGQPGADGNPGAPGPAGP 271
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Frame = -2
Query: 714 PPGXXGXXGXXXPXGGP-XPXXEXXPXGXPTGXXXPXTNPPXXPAPXXXP 568
PPG G G G P P P P P T PP P P P
Sbjct: 104 PPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPWKPCPQGPP 153
Score = 29.9 bits (64), Expect = 4.2
Identities = 22/81 (27%), Positives = 22/81 (27%)
Frame = -2
Query: 711 PGXXGXXGXXXPXGGPXPXXEXXPXGXPTGXXXPXTNPPXXPAPXXXPPXXXEXXXXXXP 532
PG G G G P P P P P PP P P P E P
Sbjct: 117 PGKPGAPGLPGNPGRP-PQQPCEPITPPPWKPCPQ-GPPGPPGPPGPPGDSGEPGSPGLP 174
Query: 531 XXXRXPXXPAXXXXKXRPXPP 469
P P K P P
Sbjct: 175 GQDAAPGEPGPKGPKGPPGAP 195
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = -2
Query: 714 PPGXXGXXGXXXPXGGPXPXXEXXPXGXPTGXXXPXTNPPXXP 586
PPG G G G P P P G P P P P
Sbjct: 228 PPGSPGQPGADGSPGQPGPKGPNGPDGQPGADGNPGAPGPAGP 270
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -2
Query: 711 PGXXGXXGXXXPXGGPXPXXEXXPXGXPTGXXXPXTNPPXXPAPXXXPP 565
PG G G P G P P G P G P PP P PP
Sbjct: 403 PGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPP---PPGGPGAYGPPP 448
Score = 29.1 bits (62), Expect = 7.4
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -2
Query: 723 GXXPPGXXGXXGXXXPXGGPXPXXEXXPXGXPTGXXXPXTNPPXXPAP 580
G PPG G G P G P G P P T P AP
Sbjct: 410 GPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAP 457
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 30.7 bits (66), Expect = 2.4
Identities = 22/72 (30%), Positives = 24/72 (33%)
Frame = +1
Query: 466 GRGXWAXFXSXXGGXXXXAXGXGXXXGXXFXXXGXXXGXGGXXGXVGXGXLXPGRXPXXA 645
GRG W + GG G G G G G G G G G PG
Sbjct: 100 GRGDWGGNNNGGGGNWG---GGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPGSNGGGD 156
Query: 646 XLXSGXGAXGGG 681
+G G GGG
Sbjct: 157 WGGNGGGGRGGG 168
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 30.7 bits (66), Expect = 2.4
Identities = 27/106 (25%), Positives = 29/106 (27%), Gaps = 1/106 (0%)
Frame = -2
Query: 744 PXXXXXPGXXPPGXXGXXGXXXPXGGPXPXXEXXPXGXPTGXXXPXTNP-PXXPAPXXXP 568
P PG P G G G P G P P P G P G P P P P
Sbjct: 139 PCPEGPPG--PAGPPGPDGNKGPLGPPGPPGPEGPNGEP-GNKGPAGPPGPGGKPGPAGP 195
Query: 567 PXXXEXXXXXXPXXXRXPXXPAXXXXKXRPXPPTXXPKXGXKXXKG 430
P P P P + P G + KG
Sbjct: 196 PGENGNNGEPQPGAPGEPGQPGQPGQRGPAGEPGKDGSPGGQGEKG 241
Score = 29.1 bits (62), Expect = 7.4
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -2
Query: 714 PPGXXGXXGXXXPXGGPXPXXEXXPXGXPTGXXXPXTNPPXXPAPXXXP 568
PPG G G G P P P P T PP P P P
Sbjct: 99 PPGTPGSAGRPGKPGAPG--LNGNPGRPPKEPCEPLTPPPCKPCPEGPP 145
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Frame = -2
Query: 714 PPGXXGXXGXXXPXGGPX-PXXEXXPXGXPTGXXXPXTNPPXXPAPXXXP 568
PPG G G G P P P P P T PP P P P
Sbjct: 104 PPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPP 153
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = -2
Query: 714 PPGXXGXXGXXXPXGGPXPXXEXXPXGXPTGXXXPXTNPPXXP 586
PPG G G G P P P G P P P P
Sbjct: 229 PPGSPGQPGADGSPGQPGPKGPNGPDGQPGADGNPGAPGPAGP 271
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 30.7 bits (66), Expect = 2.4
Identities = 23/88 (26%), Positives = 23/88 (26%)
Frame = +2
Query: 449 PXFGXXVGGXGRXFXXXXAGXXGXRXXXGWXXXXXSXXXGGXXXGAGXXGGLVXGXXXPV 628
P FG VG G AG G G GG G
Sbjct: 211 PSFGGGVGAPGAPGPAGDAGSPGQPGAPGQPGRPGKNAQGGSSRPGPPGPAGPPGPPGNN 270
Query: 629 GXPXGXXSXXGXGPPXGXXXPXXPXSPG 712
G P G GPP P P PG
Sbjct: 271 GAPGGGYGVGPPGPPGPSGRPGAPGQPG 298
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 2.4
Identities = 28/121 (23%), Positives = 32/121 (26%), Gaps = 4/121 (3%)
Frame = -1
Query: 745 PPPGXPXXGXPP-XGXGXXXXXXPXRXPPPXXXXXPXRXXDRGXXTP---NQPXXXXRPX 578
PPP P G PP G G PPP P P P
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 296
Query: 577 PXXXPXPRXXXXXPXPXPPXXXXARXXXXKXPPXPPDXPXEXRXEXXKGXSTQTXTPNPX 398
P P PR PP + P PP P + R + T +
Sbjct: 297 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP--PRQKRQAPERSPPTGSPPTGSP 354
Query: 397 P 395
P
Sbjct: 355 P 355
Score = 30.3 bits (65), Expect = 3.2
Identities = 21/80 (26%), Positives = 21/80 (26%)
Frame = -1
Query: 760 GXXPXPPPGXPXXGXPPXGXGXXXXXXPXRXPPPXXXXXPXRXXDRGXXTPNQPXXXXRP 581
G PP G P PP G PP P R P P P
Sbjct: 227 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS----PPPPPTGSPPP 282
Query: 580 XPXXXPXPRXXXXXPXPXPP 521
P P P P PP
Sbjct: 283 PPAGGSPPPPRAGSPPPPPP 302
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 2.4
Identities = 28/121 (23%), Positives = 32/121 (26%), Gaps = 4/121 (3%)
Frame = -1
Query: 745 PPPGXPXXGXPP-XGXGXXXXXXPXRXPPPXXXXXPXRXXDRGXXTP---NQPXXXXRPX 578
PPP P G PP G G PPP P P P
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 317
Query: 577 PXXXPXPRXXXXXPXPXPPXXXXARXXXXKXPPXPPDXPXEXRXEXXKGXSTQTXTPNPX 398
P P PR PP + P PP P + R + T +
Sbjct: 318 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP--PRQKRQAPERSPPTGSPPTGSP 375
Query: 397 P 395
P
Sbjct: 376 P 376
Score = 30.3 bits (65), Expect = 3.2
Identities = 21/80 (26%), Positives = 21/80 (26%)
Frame = -1
Query: 760 GXXPXPPPGXPXXGXPPXGXGXXXXXXPXRXPPPXXXXXPXRXXDRGXXTPNQPXXXXRP 581
G PP G P PP G PP P R P P P
Sbjct: 248 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS----PPPPPTGSPPP 303
Query: 580 XPXXXPXPRXXXXXPXPXPP 521
P P P P PP
Sbjct: 304 PPAGGSPPPPRAGSPPPPPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 2.4
Identities = 28/121 (23%), Positives = 32/121 (26%), Gaps = 4/121 (3%)
Frame = -1
Query: 745 PPPGXPXXGXPP-XGXGXXXXXXPXRXPPPXXXXXPXRXXDRGXXTP---NQPXXXXRPX 578
PPP P G PP G G PPP P P P
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 302
Query: 577 PXXXPXPRXXXXXPXPXPPXXXXARXXXXKXPPXPPDXPXEXRXEXXKGXSTQTXTPNPX 398
P P PR PP + P PP P + R + T +
Sbjct: 303 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP--PRQKRQAPERSPPTGSPPTGSP 360
Query: 397 P 395
P
Sbjct: 361 P 361
Score = 30.3 bits (65), Expect = 3.2
Identities = 21/80 (26%), Positives = 21/80 (26%)
Frame = -1
Query: 760 GXXPXPPPGXPXXGXPPXGXGXXXXXXPXRXPPPXXXXXPXRXXDRGXXTPNQPXXXXRP 581
G PP G P PP G PP P R P P P
Sbjct: 233 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS----PPPPPTGSPPP 288
Query: 580 XPXXXPXPRXXXXXPXPXPP 521
P P P P PP
Sbjct: 289 PPAGGSPPPPRAGSPPPPPP 308
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 30.7 bits (66), Expect = 2.4
Identities = 32/155 (20%), Positives = 36/155 (23%), Gaps = 2/155 (1%)
Frame = -2
Query: 678 PXGGPXPXXEXXPXGXPTGXXXPXTNPPXXPAPXXXPPXXXEXXXXXXPXXXRXPXXPAX 499
P P P E P P P P P P P + P P
Sbjct: 165 PEPKPKPKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPK 224
Query: 498 XXXKXRPXP-PTXXPKXGXKXXKGXAXXXXXXXXXXXXPXHXPXKNPXXPPXXXPXXR-K 325
K +P P P P+ K P P P P P
Sbjct: 225 PKPKPKPKPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKPKPKLKPKPKPNPKPEPNPM 284
Query: 324 PXXXPKXXXXXXSXXQSXXXPPXXXTXXPXXPPXP 220
P PK S + P P P P
Sbjct: 285 PELKPKPKHKPNSRPKPNPRPKPKPRSKPNPKPKP 319
Score = 29.1 bits (62), Expect = 7.4
Identities = 23/101 (22%), Positives = 27/101 (26%), Gaps = 1/101 (0%)
Frame = -1
Query: 604 QPXXXXRPXPXXXPXPRXXXXXPXPXP-PXXXXARXXXXKXPPXPPDXPXEXRXEXXKGX 428
+P +P P P P+ P P P P K P P P K
Sbjct: 170 KPKPEPKPKPKPDPKPK-PKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPK 228
Query: 427 STQTXTPNPXPXXPXSXXXXKPPXXXXXXXXXQETKXXPKV 305
PNP P P E K PK+
Sbjct: 229 PKPKPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKPKPKL 269
Score = 28.7 bits (61), Expect = 9.8
Identities = 30/161 (18%), Positives = 36/161 (22%), Gaps = 2/161 (1%)
Frame = -2
Query: 678 PXGGPXPXXEXXPXGXPTGXXXPXTNPPXXPAPXXXPPXXXEXXXXXXPXXXRXPXXPAX 499
P P P + P P P P P P P E P P
Sbjct: 161 PNPKPEPKPKPKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPK 220
Query: 498 XXXKXRPXP-PTXXPKXGXKXXKGXAXXXXXXXXXXXXPXHXPXKNPXXPPXXXPXXR-K 325
K +P P P P + P P P P + +
Sbjct: 221 PKPKPKPKPKPKPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKPKPKLKPKPKPNPKPE 280
Query: 324 PXXXPKXXXXXXSXXQSXXXPPXXXTXXPXXPPXPXXXXXP 202
P P+ S P P P P P
Sbjct: 281 PNPMPELKPKPKHKPNSRPKPNPRPKPKPRSKPNPKPKPRP 321
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.3 bits (65), Expect = 3.2
Identities = 34/138 (24%), Positives = 34/138 (24%)
Frame = +3
Query: 339 GXXGGGXGGFXWXXXXGXXXXXXXXXXXXXXXXXXSXLXSXGXSGGXGGLXLXXXRAXXX 518
G GGG GG G G GG GG
Sbjct: 23 GGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCG---GGGGGC 79
Query: 519 XGGXGXGFXXXXLGXGXXXGXGRXXWXGWXGVXXPRSXXLXGXXXXXGGGXRXGXXXXXX 698
GG G G G G G G G P G GGG G
Sbjct: 80 GGGGGCGGGGGGCGGGGGGCGGGGGCGG--GCAPPPPPPACGGGCGGGGGGCGGGCGGGG 137
Query: 699 PXPXGGXPXXGXPGGGXG 752
GG G GGG G
Sbjct: 138 GGGCGGGGGGGCGGGGGG 155
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.3 bits (65), Expect = 3.2
Identities = 33/137 (24%), Positives = 35/137 (25%), Gaps = 1/137 (0%)
Frame = -1
Query: 766 GXGXXPXPPPGXPXXGXPPXGXGXXXXXXPXRXPPPXXXXXPXRXXDRGXXTPNQPXXXX 587
G G P P PP P R PPP P RG P++P
Sbjct: 546 GSGASSYSTPAAP----PPPTRVESHGLAPARPPPP-----PPSSGTRGI-APSRPLPQA 595
Query: 586 RPXPXXXPXPRXXXXXPXPXPPXXXXARXXXXKXPPXPPDXPXEXRXEXXKGXSTQTXTP 407
P P P PP PP PP P G P
Sbjct: 596 PNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 655
Query: 406 NP-XPXXPXSXXXXKPP 359
P P S PP
Sbjct: 656 PPSGAGGPASVLAKLPP 672
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.3 bits (65), Expect = 3.2
Identities = 33/137 (24%), Positives = 35/137 (25%), Gaps = 1/137 (0%)
Frame = -1
Query: 766 GXGXXPXPPPGXPXXGXPPXGXGXXXXXXPXRXPPPXXXXXPXRXXDRGXXTPNQPXXXX 587
G G P P PP P R PPP P RG P++P
Sbjct: 372 GSGASSYSTPAAP----PPPTRVESHGLAPARPPPP-----PPSSGTRGI-APSRPLPQA 421
Query: 586 RPXPXXXPXPRXXXXXPXPXPPXXXXARXXXXKXPPXPPDXPXEXRXEXXKGXSTQTXTP 407
P P P PP PP PP P G P
Sbjct: 422 PNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 481
Query: 406 NP-XPXXPXSXXXXKPP 359
P P S PP
Sbjct: 482 PPSGAGGPASVLAKLPP 498
>AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical
protein Y51H7C.1 protein.
Length = 448
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +2
Query: 629 GXPXGXXSXXGXGPPXGXXXPXXPXSPGGXXPGXXXXXG 745
G P G + G G P G P P +PGG PG G
Sbjct: 40 GTPGGPGTPGGPGTPGGLGTPGGPGTPGG--PGTPETSG 76
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 29.9 bits (64), Expect = 4.2
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = -2
Query: 711 PGXXGXXGXXXPXGGPXPXXEXXPXGXPTGXXXPXTNPPXXPAPXXXP 568
PG G G P G P G P TN P P P P
Sbjct: 144 PGEAGPAGPAGPPGPDGQPGAPGPNGQPGAAGTTSTNEPGSPGPAGPP 191
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 29.5 bits (63), Expect = 5.6
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Frame = -2
Query: 744 PXXXXXPGXX-PPGXXGXXGXXXPXGGPXPXXEXXPXGXPTGXXXP 610
P PG PPG G G P G P P E G P P
Sbjct: 213 PGQPGEPGAQGPPGEDGRPGNSGPQGPPGPQGEPGQDGAPGNPGAP 258
>U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 13 protein.
Length = 302
Score = 29.5 bits (63), Expect = 5.6
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 1/54 (1%)
Frame = -2
Query: 744 PXXXXXPGXX-PPGXXGXXGXXXPXGGPXPXXEXXPXGXPTGXXXPXTNPPXXP 586
P PG PPG G G G P P P G P P P P
Sbjct: 221 PGSTGEPGPVGPPGPSGQPGNDGTPGQPGPKGPPGPDGKPGADGNPGQPGPVGP 274
>M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein (
C.elegans collagen (dpy-13) gene, complete cds. ).
Length = 302
Score = 29.5 bits (63), Expect = 5.6
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 1/54 (1%)
Frame = -2
Query: 744 PXXXXXPGXX-PPGXXGXXGXXXPXGGPXPXXEXXPXGXPTGXXXPXTNPPXXP 586
P PG PPG G G G P P P G P P P P
Sbjct: 221 PGSTGEPGPVGPPGPSGQPGNDGTPGQPGPKGPPGPDGKPGADGNPGQPGPVGP 274
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.5 bits (63), Expect = 5.6
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -3
Query: 680 PPPXAPXPXXXXAXQGXRPGXXNPXPTXPXXPPXP 576
PPP P P Q P P PT PP P
Sbjct: 68 PPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPP 102
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -1
Query: 775 PXXGXGXXPXPPPGXPXXGXPPXGXGXXXXXXPXRXPPP 659
P G P PP P G P G G P R P P
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVPTP 820
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 29.1 bits (62), Expect = 7.4
Identities = 26/89 (29%), Positives = 27/89 (30%), Gaps = 4/89 (4%)
Frame = +3
Query: 522 GGXGXGFXXXXLGX--GXXXGXGRXXWXGWXGVXXPR--SXXLXGXXXXXGGGXRXGXXX 689
GG G GF G G G G G+ G G GGG R G
Sbjct: 9 GGGGGGFRGGRGGDRGGSRGGFGGGGRGGYGGGDRGSFGGGDRGGFRGGRGGGDRGGFRG 68
Query: 690 XXXPXPXGGXPXXGXPGGGXGXXPXPXXG 776
GG G P GG G P G
Sbjct: 69 GRGGGDRGGFGGRGSPRGGFGGRGSPRGG 97
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 29.1 bits (62), Expect = 7.4
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -2
Query: 714 PPGXXGXXGXXXPXGGPXPXXEXXPXGXPTGXXXPXTNPPXXPAPXXXP 568
PPG G G G P P P P T PP P P P
Sbjct: 97 PPGTPGRAGRPGKPGAPG--LNGNPGRPPKEPCEPITPPPCKPCPEGPP 143
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -1
Query: 775 PXXGXGXXPXPPPGXPXXGXPPXGXGXXXXXXPXRXPPP 659
P G P PP P G P G G P R P P
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVPTP 820
>U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 2 protein.
Length = 380
Score = 28.7 bits (61), Expect = 9.8
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = -2
Query: 744 PXXXXXPGXXPPGXXGXXGXXXPXGGPXPXXEXXPXGXPTGXXXPXTNPPXXPAPXXXP 568
P PG PPG G G P G E G P P PP P P P
Sbjct: 231 PEAHVIPG--PPGDSGLPGPWGPPGSAGMPGEDGYAGTPGEKGWP--GPPGAPGPGGMP 285
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 28.7 bits (61), Expect = 9.8
Identities = 21/84 (25%), Positives = 22/84 (26%), Gaps = 2/84 (2%)
Frame = -2
Query: 714 PPGXXGXXGXXXPXGGPXPXXEXXPXG-XPTGXXXPXTNPPXXPAPXXXPPXXXEXXXXX 538
PPG G G P G P P G P+ PP P P
Sbjct: 163 PPGPAGPPGGPGPPGPPGPEGAPGEDGNTPSRGGVGEAGPPGPPGTSGNPGTDGAPGNPG 222
Query: 537 XP-XXXRXPXXPAXXXXKXRPXPP 469
P P P P PP
Sbjct: 223 APGQVTETPGTPGPAGAAGPPGPP 246
>L12706-1|AAA17398.2| 360|Caenorhabditis elegans collagen protein.
Length = 360
Score = 28.7 bits (61), Expect = 9.8
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = -2
Query: 744 PXXXXXPGXXPPGXXGXXGXXXPXGGPXPXXEXXPXGXPTGXXXPXTNPPXXPAPXXXP 568
P PG PPG G G P G E G P P PP P P P
Sbjct: 231 PEAHVIPG--PPGDSGLPGPWGPPGSAGMPGEDGYAGTPGEKGWP--GPPGAPGPGGMP 285
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 28.7 bits (61), Expect = 9.8
Identities = 26/101 (25%), Positives = 27/101 (26%), Gaps = 2/101 (1%)
Frame = -1
Query: 766 GXGXXPXPPP-GXPXXGXPPXGXGXXXXXXPXRXPPPXXXXXPXRXXD-RGXXTPNQPXX 593
G G P PPP G G PP P PP P + G P Q
Sbjct: 675 GGGQGPPPPPQGQQYYGGPPP---PGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRG 731
Query: 592 XXRPXPXXXPXPRXXXXXPXPXPPXXXXARXXXXKXPPXPP 470
P P P P PP P PP
Sbjct: 732 YGYPPPPQPGHPYQQPYGQMPPPPHGQYQPQQQQGGPMGPP 772
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 28.7 bits (61), Expect = 9.8
Identities = 26/101 (25%), Positives = 27/101 (26%), Gaps = 2/101 (1%)
Frame = -1
Query: 766 GXGXXPXPPP-GXPXXGXPPXGXGXXXXXXPXRXPPPXXXXXPXRXXD-RGXXTPNQPXX 593
G G P PPP G G PP P PP P + G P Q
Sbjct: 675 GGGQGPPPPPQGQQYYGGPPP---PGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRG 731
Query: 592 XXRPXPXXXPXPRXXXXXPXPXPPXXXXARXXXXKXPPXPP 470
P P P P PP P PP
Sbjct: 732 YGYPPPPQPGHPYQQPYGQMPPPPHGQYQPQQQQGGPMGPP 772
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.156 0.540
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,523,057
Number of Sequences: 27780
Number of extensions: 195187
Number of successful extensions: 1811
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1338
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3735997402
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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