Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_M06
(1189 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0085 - 22265143-22265226,22265294-22265602,22266915-222671... 58 2e-08
01_06_1338 + 36411536-36411646,36411738-36411791,36411898-364119... 56 7e-08
01_06_1336 + 36396904-36397014,36397141-36397191,36397681-363977... 56 7e-08
10_01_0070 + 902999-903354,904354-904600,904718-904897,905087-90... 52 9e-07
10_01_0069 + 890634-890941,892146-892395,893146-893175,894956-89... 49 8e-06
04_01_0350 - 4610444-4610668,4612181-4612969 47 3e-05
10_01_0065 + 845447-846187,846969-847193 46 8e-05
10_01_0066 + 848523-849269,849520-849741 44 3e-04
04_04_0032 + 22291469-22291818,22292438-22292681,22292873-222930... 43 4e-04
03_02_0297 + 7196624-7196931,7198015-7198258,7198385-7198573,719... 42 0.001
04_04_0033 + 22295974-22296290,22296441-22296684,22296797-222969... 42 0.001
04_04_0034 + 22298636-22298952,22299057-22299300,22299395-222995... 41 0.002
01_06_1337 + 36404245-36404355,36404467-36404517,36405304-364053... 41 0.002
05_05_0196 + 23152389-23152658,23153042-23153092,23153167-231532... 39 0.007
09_02_0012 + 2965797-2966714,2966756-2967011,2967051-2967147,296... 29 5.4
>05_05_0085 -
22265143-22265226,22265294-22265602,22266915-22267187,
22267413-22267500,22267620-22267696,22267791-22267841,
22267967-22268077
Length = 330
Score = 57.6 bits (133), Expect = 2e-08
Identities = 30/78 (38%), Positives = 38/78 (48%)
Frame = +2
Query: 359 LRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGXEKLIGKAIKNKIDDG 538
L G +P + LGT P + V A+ GYR ID A Y EK IG A+K D+G
Sbjct: 7 LNTGAKIPSVGLGTWQAEPGVVGNAVYAAVKAGYRHIDCAQAYFNEKEIGVALKKVFDEG 66
Query: 539 TVRRXXLXIMGKXWXXXH 592
V+R + I K W H
Sbjct: 67 IVKREDIFITSKLWCTNH 84
>01_06_1338 +
36411536-36411646,36411738-36411791,36411898-36411974,
36412108-36412195,36412289-36412561,36412651-36412968
Length = 306
Score = 55.6 bits (128), Expect = 7e-08
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +2
Query: 359 LRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGXE-KLIGKAIKNKIDD 535
L G +P + LGT + ++V A+ GYR ID A +Y E ++IG A+K DD
Sbjct: 7 LNTGARIPSVGLGTYKAGTGVVADVVSAAVKAGYRHIDCAPLYKNEQEVIGGALKKLFDD 66
Query: 536 GTVRRXXLXIMGKXW 580
G V+R L I K W
Sbjct: 67 GVVKREDLFITSKIW 81
>01_06_1336 +
36396904-36397014,36397141-36397191,36397681-36397757,
36397876-36397963,36398616-36398891,36399002-36399250,
36400315-36400398
Length = 311
Score = 55.6 bits (128), Expect = 7e-08
Identities = 28/78 (35%), Positives = 39/78 (50%)
Frame = +2
Query: 359 LRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGXEKLIGKAIKNKIDDG 538
L G +P + LGT P + + V A+ GYR ID A +Y E +G A+K ++G
Sbjct: 7 LNTGAKIPSVGLGTWQSDPGVVGDAVYAAVKAGYRHIDCARMYKNENEVGIALKKLFEEG 66
Query: 539 TVRRXXLXIMGKXWXXXH 592
V+R L I K W H
Sbjct: 67 VVKREDLFITSKLWCDCH 84
>10_01_0070 +
902999-903354,904354-904600,904718-904897,905087-905332
Length = 342
Score = 52.0 bits (119), Expect = 9e-07
Identities = 32/81 (39%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Frame = +2
Query: 359 LRDGTFMPVIALGTALLP------PRLTTEIVETAIDMGYRAIDTAYIYGXEKLIGKAIK 520
LR G MP++ +GTA P P + V AID GYR DTA YG E +G+A+
Sbjct: 21 LRSGKPMPLVGMGTASFPLDAPQLPATVRDAVLRAIDAGYRHFDTAAAYGTEAPLGEAVL 80
Query: 521 NKIDDGTV-RRXXLXIMGKXW 580
+ G V R L I K W
Sbjct: 81 EAVRAGMVASRDDLYITSKLW 101
>10_01_0069 +
890634-890941,892146-892395,893146-893175,894956-895135,
895418-895669
Length = 339
Score = 48.8 bits (111), Expect = 8e-06
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = +2
Query: 359 LRDGTFMPVIALGTALLP-----PRLTTEIVETAIDMGYRAIDTAYIYGXEKLIGKAIKN 523
L G MP + +GTA P P ++V AI+ GYR DTA +Y E ++G A+
Sbjct: 6 LSSGKPMPRVGMGTASFPLGATDPSTVKDVVLRAIEAGYRHFDTAAVYQTEAILGDAVAE 65
Query: 524 KIDDGTV-RRXXLXIMGKXW 580
+ G V R L I K W
Sbjct: 66 AVRAGLVASRDELYITSKLW 85
>04_01_0350 - 4610444-4610668,4612181-4612969
Length = 337
Score = 46.8 bits (106), Expect = 3e-05
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +2
Query: 344 VATLKLRDGTFMPVIALGT-ALLPPRLTTEIVETAIDMGYRAIDTAYIYGXEKLIGKAIK 520
V + L G MPV+ GT + PP + A+ +GYR +DTA +YG E +G A+
Sbjct: 20 VPCVTLNSGHAMPVLGFGTGSSTPPADLAATIAHAVRLGYRHLDTAAVYGTEGAVGAAVA 79
Query: 521 NKIDDGTV 544
+ G V
Sbjct: 80 EAVRCGAV 87
>10_01_0065 + 845447-846187,846969-847193
Length = 321
Score = 45.6 bits (103), Expect = 8e-05
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = +2
Query: 377 MPVIALGTALLP---PRLTTEIVETAIDMGYRAIDTAYIYGXEKLIGKAIKNKIDDGTV- 544
MP + +GTA P TT + AI++GYR DTA IY E +G+A+ + G +
Sbjct: 16 MPRVGMGTAAFPFTSSEDTTAAMLRAIELGYRHFDTARIYATEGCVGEAVAEAVRRGLIA 75
Query: 545 RRXXLXIMGKXW 580
R + + K W
Sbjct: 76 SRADVFVTSKIW 87
>10_01_0066 + 848523-849269,849520-849741
Length = 322
Score = 43.6 bits (98), Expect = 3e-04
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +2
Query: 377 MPVIALGTALLP---PRLTTEIVETAIDMGYRAIDTAYIYGXEKLIGKAIKNKIDDGTV- 544
MP I +GTA P TT + AI++GYR DTA +Y E + +A+ + G V
Sbjct: 18 MPRIGMGTAAFPFTSSEETTAALLRAIELGYRHFDTARLYATEGCVSEAVAEAVRRGLVA 77
Query: 545 RRXXLXIMGKXW 580
R + + K W
Sbjct: 78 SRADVFVTSKLW 89
>04_04_0032 +
22291469-22291818,22292438-22292681,22292873-22293052,
22293843-22294070
Length = 333
Score = 43.2 bits (97), Expect = 4e-04
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +2
Query: 368 GTFMPVIALGTALLPP---RLTTEIVETAIDMGYRAIDTAYIYGXEKLIGKAIKNKIDDG 538
G +P + LGTA L + A+++GYR IDTA +YG E+++G+A+ G
Sbjct: 25 GRAVPAVGLGTASLRSVGEESFRGALLAALEVGYRHIDTASVYGSERVVGEAVAGAARRG 84
Query: 539 TVR-RXXLXIMGKXW 580
+ R + + K W
Sbjct: 85 VIACREEVFVTTKVW 99
>03_02_0297 +
7196624-7196931,7198015-7198258,7198385-7198573,
7198650-7198874
Length = 321
Score = 41.9 bits (94), Expect = 0.001
Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +2
Query: 368 GTFMPVIALGTALLPPRLTT--EIVETAIDMGYRAIDTAYIYGXEKLIGKAIKNKIDDGT 541
G MP + +GTA+ PR V AI+ GYR DTA Y E IG+A + G
Sbjct: 12 GFGMPRVGMGTAVQGPRPEPIRRAVLKAIEAGYRHFDTAAHYETEAPIGEAAAEAVRSGA 71
Query: 542 V-RRXXLXIMGKXW 580
+ R L I K W
Sbjct: 72 IASRADLFITSKLW 85
>04_04_0033 +
22295974-22296290,22296441-22296684,22296797-22296976,
22297749-22297979
Length = 323
Score = 41.5 bits (93), Expect = 0.001
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +2
Query: 347 ATLKLRDGTFMPVIALGTALLP--PRLTTEIVETAIDMGYRAIDTAYIYGXEKLIGKAIK 520
A L+ D MP + +G A P P T + V A++ G+R DTA +Y E +G+AI
Sbjct: 8 AVLRHGDARPMPAVGMGVAEYPSTPERTRDAVLAALEAGFRHFDTASLYRTEAPLGEAIA 67
Query: 521 NKIDDGTV-RRXXLXIMGKXW 580
G + R + K W
Sbjct: 68 EATRRGLLASREEAFVTTKLW 88
>04_04_0034 +
22298636-22298952,22299057-22299300,22299395-22299574,
22300819-22300842,22301055-22301285
Length = 331
Score = 40.7 bits (91), Expect = 0.002
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +2
Query: 332 SVKEVATLKLRDGTFMPVIALGTA---LLPPRLTTEIVETAIDMGYRAIDTAYIYGXEKL 502
+V EVA L+ G MP + +GTA P A+++G+R DTA +YG E
Sbjct: 3 AVPEVA-LRHGAGRPMPAVGVGTADSAATSPETKRGAALAALEVGFRHFDTAALYGTEAP 61
Query: 503 IGKAIKNKIDDGTV-RRXXLXIMGKXW 580
+G+AI G V R + + K W
Sbjct: 62 LGEAIAEATRRGLVASREEVFVTTKLW 88
>01_06_1337 +
36404245-36404355,36404467-36404517,36405304-36405337,
36405428-36405485,36405499-36405586,36406110-36406385,
36406505-36406753,36407558-36407641
Length = 316
Score = 40.7 bits (91), Expect = 0.002
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = +2
Query: 359 LRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGXEKLIGKAIKNKIDD 535
L G +P + LGT P + V A+ GYR ID A Y EK +G A+K ++
Sbjct: 7 LNTGAKIPSVGLGTWQSDPGVVGNAVYAAVKAGYRHIDCASAYNNEKEVGLALKKLFEE 65
>05_05_0196 +
23152389-23152658,23153042-23153092,23153167-23153240,
23153356-23153443,23153541-23153738,23153824-23153895,
23154034-23154093,23154194-23154370,23154975-23155064
Length = 359
Score = 39.1 bits (87), Expect = 0.007
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 386 IALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGXEKLIGKAIKNKIDDGTVRRXXLXI 565
+A+ + + ++ + GYR +DTA YG E+ +GK +K ++ G + R L +
Sbjct: 69 VAMASKPILSVFANNLIVNHLQAGYRHVDTAAQYGIEQEVGKGLKAAMEAG-INRKDLFV 127
Query: 566 MGKXW 580
K W
Sbjct: 128 TSKIW 132
>09_02_0012 +
2965797-2966714,2966756-2967011,2967051-2967147,
2967175-2967634,2967804-2968117,2968220-2968235
Length = 686
Score = 29.5 bits (63), Expect = 5.4
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +2
Query: 200 VKMESPGSGQRRLDNGKQKRDTGDLTDEQYKTRIAELNEAKLKGSVKEVATLKLRD 367
V E PG G + D G +T + K R A L EA + +KE A K +D
Sbjct: 603 VYAEFPGGGNNDAQEPLLE-DAGKITCTRQKVRAASLEEAVFRTEIKEGAEGKAKD 657
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,435,554
Number of Sequences: 37544
Number of extensions: 256849
Number of successful extensions: 898
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3619931772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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