Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_M06
(1189 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 71 1e-12
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 69 7e-12
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 69 7e-12
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 55 1e-07
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 52 1e-06
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 51 1e-06
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 46 7e-05
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 42 6e-04
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 42 6e-04
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 41 0.001
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 41 0.002
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 39 0.008
U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory... 30 2.8
AL023835-11|CAA19495.1| 335|Caenorhabditis elegans Hypothetical... 29 4.9
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 71.3 bits (167), Expect = 1e-12
Identities = 36/78 (46%), Positives = 47/78 (60%)
Frame = +2
Query: 347 ATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGXEKLIGKAIKNK 526
A++KL +G MPVI LGT P V+TA+ GYR IDTA +Y E+ IG AIK
Sbjct: 6 ASIKLSNGVEMPVIGLGTWQSSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAIKEL 65
Query: 527 IDDGTVRRXXLXIMGKXW 580
+++G V+R L I K W
Sbjct: 66 LEEGVVKREELFITTKAW 83
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 68.9 bits (161), Expect = 7e-12
Identities = 33/83 (39%), Positives = 47/83 (56%)
Frame = +2
Query: 344 VATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGXEKLIGKAIKN 523
V +LKL G +P I LGT P ++TA+ GYR ID A++Y +K +G+A+K
Sbjct: 2 VQSLKLNSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKE 61
Query: 524 KIDDGTVRRXXLXIMGKXWXXXH 592
+D+G V+R L I K W H
Sbjct: 62 ILDEGKVKREELFITSKVWNTFH 84
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 68.9 bits (161), Expect = 7e-12
Identities = 33/83 (39%), Positives = 47/83 (56%)
Frame = +2
Query: 344 VATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGXEKLIGKAIKN 523
V +LKL G +P I LGT P ++TA+ GYR ID A++Y +K +G+A+K
Sbjct: 2 VQSLKLNSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKE 61
Query: 524 KIDDGTVRRXXLXIMGKXWXXXH 592
+D+G V+R L I K W H
Sbjct: 62 ILDEGKVKREELFITSKVWNTFH 84
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 54.8 bits (126), Expect = 1e-07
Identities = 30/81 (37%), Positives = 40/81 (49%)
Frame = +2
Query: 350 TLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGXEKLIGKAIKNKI 529
T+ L G MPVI GT LP L E V A++ GYR ID+A + ++ + IK+
Sbjct: 6 TVTLNSGYEMPVIGYGTWQLPKNLAAERVRDALEAGYRHIDSALSFKNQEEVAAGIKDWC 65
Query: 530 DDGTVRRXXLXIMGKXWXXXH 592
VRR L + K W H
Sbjct: 66 KIRKVRREELFLSSKIWNTYH 86
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 51.6 bits (118), Expect = 1e-06
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Frame = +2
Query: 245 GKQKRDTGDLTDEQYKTRIAE-LNEAKLKGSVKEVATLKLRDGTFMPVIALGTALLPPRL 421
G+ G+ +D+ + + L ++ LK S + + L L + MP + LGT
Sbjct: 12 GRSSNSDGNASDDGHPPALTPILLKSYLKNSDAK-SHLTLSNAHSMPAVGLGTWQSNAED 70
Query: 422 TTEIVETAIDMGYRAIDTAYIYGXEKLIGKAIKNKIDDGTVRRXXLXIMGK 574
V+ A+ GY IDTA Y E+ IG AIK I +G V+R L I K
Sbjct: 71 VISAVKAAVKNGYSLIDTASGYNNEEFIGTAIKEVIAEGVVKREDLFITTK 121
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 51.2 bits (117), Expect = 1e-06
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +2
Query: 344 VATLKLRDGTFMPVIALGTALLPPRLT-TEIVETAIDMGYRAIDTAYIYGXEKLIGKAIK 520
V ++ L G +P+ LGT + T + A+D GYR IDTA++Y E +IGK +
Sbjct: 3 VDSIPLNTGAQLPLFGLGTWQVKDEAELTVALRAALDAGYRLIDTAHLYQNEHIIGKVLH 62
Query: 521 NKIDDGTVRRXXLXIMGK 574
I G ++R + + K
Sbjct: 63 EYISSGKLKREDIFVTSK 80
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 47.2 bits (107), Expect = 2e-05
Identities = 26/78 (33%), Positives = 38/78 (48%)
Frame = +2
Query: 341 EVATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGXEKLIGKAIK 520
+V L +G MP I LGT + ++ A+ GYR IDTA +Y E IG A+
Sbjct: 4 KVPIFTLSNGVLMPSIGLGTWQMTGEEGKTVIRNAVLAGYRHIDTATLYQNEHQIGDALA 63
Query: 521 NKIDDGTVRRXXLXIMGK 574
+G ++R + I K
Sbjct: 64 ELFAEGILKREDIFITTK 81
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 45.6 bits (103), Expect = 7e-05
Identities = 24/75 (32%), Positives = 39/75 (52%)
Frame = +2
Query: 350 TLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGXEKLIGKAIKNKI 529
++KL G P+I LGT + +++ A+ GYR DTA +Y EK IG A++ +
Sbjct: 2 SIKLNTGYDCPLIGLGTYKIIGDQVLPVLDAALTAGYRLFDTAKVYNNEKEIGDALEILL 61
Query: 530 DDGTVRRXXLXIMGK 574
++R + I K
Sbjct: 62 PKHNLKREDIFITTK 76
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 42.3 bits (95), Expect = 6e-04
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +2
Query: 356 KLRDGTFMPVIALGTALLPPRLTTEI-VETAIDMGYRAIDTAYIYGXEKLIGKAIKNKID 532
K DG MP I LG + + + ++ +E A+ GYR DTA +Y E +G ++K +
Sbjct: 13 KFSDGYEMPKIGLGISRIETQQDLDVSIEAALKSGYRQFDTANLYKNETFLGNSLKKYLP 72
Query: 533 DGTVRRXXLXIMGK 574
+ R + I K
Sbjct: 73 QFGLTREDVFITTK 86
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 42.3 bits (95), Expect = 6e-04
Identities = 27/79 (34%), Positives = 38/79 (48%)
Frame = +2
Query: 344 VATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGXEKLIGKAIKN 523
+ T L + MP+I LGT ++ + GYR IDTA YG EK +G A+KN
Sbjct: 2 IPTTVLSNNVEMPLIGLGTTHSGGYYHDAVLHSIKKCGYRLIDTAKRYGVEKQLGIAVKN 61
Query: 524 KIDDGTVRRXXLXIMGKXW 580
+V R + + K W
Sbjct: 62 ----CSVPREEMFLSTKLW 76
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = +2
Query: 356 KLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGXEKLIGKAIK 520
KL++G +P +ALGT V+ A+ +GYR+ DTA Y EK +G A+K
Sbjct: 3 KLKNGQEIPKLALGTYEAKGDQLFAAVDEALKVGYRSFDTAKYYENEKDLGLALK 57
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 40.7 bits (91), Expect = 0.002
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 377 MPVIALGT-ALLPPRLTTEIVETAIDMGYRAIDTAYIYGXEKLIGKAIKNKIDDGTVRRX 553
MP+I +GT + + ++++ GYR IDTA +Y E IG+ ++ + ++R
Sbjct: 11 MPLIGIGTWQVQKEEILRQVIDAGFKEGYRFIDTAQVYNNEAKIGRILEKLLPANGLKRE 70
Query: 554 XLXIMGK 574
+ I K
Sbjct: 71 DIWITSK 77
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 38.7 bits (86), Expect = 0.008
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 356 KLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGXEKLIGKAIK 520
KL G +P + GT + ++ A+ GYR DTA Y EK +G+A+K
Sbjct: 14 KLNSGYNIPFVGFGTYKVTGENVPPAIDAALTAGYRMFDTAKYYLNEKELGEALK 68
>U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory
abnormality protein14 protein.
Length = 439
Score = 30.3 bits (65), Expect = 2.8
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +2
Query: 428 EIVETAIDMGYRAIDTAYIYG---XEKLIGKAI 517
+IVETAI G IDT Y Y E ++GKA+
Sbjct: 118 KIVETAIKQGINYIDTGYWYSQSRSESILGKAL 150
>AL023835-11|CAA19495.1| 335|Caenorhabditis elegans Hypothetical
protein Y37A1B.12 protein.
Length = 335
Score = 29.5 bits (63), Expect = 4.9
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = -2
Query: 249 LPLSKRRCPLPGDSILTEVIFLNTKKHNMNQIIFILFDFTKDFQNKN*KXIQNLRFS-KT 73
L LS P G + +TE+I NT + + F TKDF N K I++ + K
Sbjct: 82 LVLSFHGGPGTGKNYVTEIIAKNTFRSGLQSPYVKYFVATKDFPNN--KHIEDYKLKLKE 139
Query: 72 KASSLDDGCGES 37
+ DGC S
Sbjct: 140 QLIQSADGCDRS 151
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,151,564
Number of Sequences: 27780
Number of extensions: 215229
Number of successful extensions: 724
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3255550896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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