Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_M04
         (1152 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    25   3.2  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    25   4.2  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    24   7.3  
AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.    24   9.6  

>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 25.4 bits (53), Expect = 3.2
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 309 ETPKWQKPITRFFASKDSDHGSTDEED 389
           E P+ +KP TRF         + DEED
Sbjct: 91  EQPRQRKPSTRFNVEGGESDSNDDEED 117


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 25.0 bits (52), Expect = 4.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 363 DHGSTDEEDIVRKKPKNNTIESDDE 437
           DHG  DEE  +  + KN T  +D +
Sbjct: 3   DHGVVDEEAPIDPRLKNRTFTADQD 27


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 24.2 bits (50), Expect = 7.3
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = +2

Query: 23  PSFXSRLFSXHPVTQHXSKXXTFHVKNQSKLKSPFXQWFHVLM 151
           P+F   L      T   S+    HV+N+ K +S    W +V +
Sbjct: 458 PTFEKPLLREMEKTIEASRFVAQHVRNKDKFESVKEDWKYVAL 500


>AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.
          Length = 115

 Score = 23.8 bits (49), Expect = 9.6
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -1

Query: 540 CCLCNIHQFCDCSHPSMVLILMF 472
           C LC+   FC+C      L  M+
Sbjct: 57  CTLCDTRHFCECKETREPLPYMY 79


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 936,299
Number of Sequences: 2352
Number of extensions: 18066
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 129572799
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)