Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_M04
(1152 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p... 33 0.29
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p... 33 0.29
Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical p... 33 0.29
Z46267-12|CAD45595.2| 528|Caenorhabditis elegans Hypothetical p... 33 0.29
Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical p... 33 0.29
Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical p... 33 0.29
Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical pr... 33 0.29
Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical pr... 33 0.29
Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical pr... 33 0.29
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr... 33 0.29
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 33 0.50
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 32 0.88
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 32 0.88
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 32 0.88
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 32 0.88
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p... 32 0.88
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr... 32 0.88
Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical pr... 32 0.88
Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical pr... 32 0.88
AY390552-1|AAQ94964.1| 557|Caenorhabditis elegans SMA-9 class I... 32 0.88
AY390551-1|AAQ94963.1| 926|Caenorhabditis elegans SMA-9 class I... 32 0.88
AY390545-1|AAQ94957.1| 792|Caenorhabditis elegans SMA-9 class I... 32 0.88
AF089729-1|AAD04156.1| 458|Caenorhabditis elegans SMG-7 protein. 31 1.2
AC024204-5|AAF36043.1| 458|Caenorhabditis elegans Suppressor wi... 31 1.2
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 31 1.5
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 31 2.0
Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical pr... 30 2.7
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 30 2.7
AL117195-6|CAB55013.2| 503|Caenorhabditis elegans Hypothetical ... 30 2.7
Z70683-1|CAA94590.1| 511|Caenorhabditis elegans Hypothetical pr... 30 3.5
L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans chrom... 30 3.5
AY572975-1|AAT77228.1| 580|Caenorhabditis elegans KQT-3 potassi... 30 3.5
AL032648-2|CAA21699.2| 621|Caenorhabditis elegans Hypothetical ... 30 3.5
AC024792-2|AAF60680.2| 813|Caenorhabditis elegans Hypothetical ... 30 3.5
Z81565-5|CAB04583.1| 332|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical p... 29 6.2
Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z70267-8|CAA94216.1| 332|Caenorhabditis elegans Hypothetical pr... 29 6.2
U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z12017-9|CAA78053.1| 537|Caenorhabditis elegans Hypothetical pr... 29 8.2
Z11505-11|CAA77591.1| 537|Caenorhabditis elegans Hypothetical p... 29 8.2
>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
protein F49E2.5j protein.
Length = 1100
Score = 33.5 bits (73), Expect = 0.29
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 381 EEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLTGENNHK 515
EE+IV KK N+ + E +TPTN + +++ +TG+ N K
Sbjct: 174 EEEIVVKKVANDRSAAPAPEPKTPTNTPAEPAEQVQEITGKKNKK 218
>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5i protein.
Length = 1030
Score = 33.5 bits (73), Expect = 0.29
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 381 EEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLTGENNHK 515
EE+IV KK N+ + E +TPTN + +++ +TG+ N K
Sbjct: 174 EEEIVVKKVANDRSAAPAPEPKTPTNTPAEPAEQVQEITGKKNKK 218
>Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical
protein F49E2.5h protein.
Length = 845
Score = 33.5 bits (73), Expect = 0.29
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 381 EEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLTGENNHK 515
EE+IV KK N+ + E +TPTN + +++ +TG+ N K
Sbjct: 174 EEEIVVKKVANDRSAAPAPEPKTPTNTPAEPAEQVQEITGKKNKK 218
>Z46267-12|CAD45595.2| 528|Caenorhabditis elegans Hypothetical
protein F49E2.5g protein.
Length = 528
Score = 33.5 bits (73), Expect = 0.29
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 381 EEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLTGENNHK 515
EE+IV KK N+ + E +TPTN + +++ +TG+ N K
Sbjct: 174 EEEIVVKKVANDRSAAPAPEPKTPTNTPAEPAEQVQEITGKKNKK 218
>Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical
protein F49E2.5f protein.
Length = 611
Score = 33.5 bits (73), Expect = 0.29
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 381 EEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLTGENNHK 515
EE+IV KK N+ + E +TPTN + +++ +TG+ N K
Sbjct: 174 EEEIVVKKVANDRSAAPAPEPKTPTNTPAEPAEQVQEITGKKNKK 218
>Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical
protein F49E2.5e protein.
Length = 581
Score = 33.5 bits (73), Expect = 0.29
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 381 EEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLTGENNHK 515
EE+IV KK N+ + E +TPTN + +++ +TG+ N K
Sbjct: 174 EEEIVVKKVANDRSAAPAPEPKTPTNTPAEPAEQVQEITGKKNKK 218
>Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical
protein F49E2.5d protein.
Length = 889
Score = 33.5 bits (73), Expect = 0.29
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 381 EEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLTGENNHK 515
EE+IV KK N+ + E +TPTN + +++ +TG+ N K
Sbjct: 174 EEEIVVKKVANDRSAAPAPEPKTPTNTPAEPAEQVQEITGKKNKK 218
>Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5c protein.
Length = 1030
Score = 33.5 bits (73), Expect = 0.29
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 381 EEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLTGENNHK 515
EE+IV KK N+ + E +TPTN + +++ +TG+ N K
Sbjct: 174 EEEIVVKKVANDRSAAPAPEPKTPTNTPAEPAEQVQEITGKKNKK 218
>Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical
protein F49E2.5b protein.
Length = 947
Score = 33.5 bits (73), Expect = 0.29
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 381 EEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLTGENNHK 515
EE+IV KK N+ + E +TPTN + +++ +TG+ N K
Sbjct: 174 EEEIVVKKVANDRSAAPAPEPKTPTNTPAEPAEQVQEITGKKNKK 218
>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical
protein F49E2.5a protein.
Length = 1215
Score = 33.5 bits (73), Expect = 0.29
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 381 EEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLTGENNHK 515
EE+IV KK N+ + E +TPTN + +++ +TG+ N K
Sbjct: 174 EEEIVVKKVANDRSAAPAPEPKTPTNTPAEPAEQVQEITGKKNKK 218
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 32.7 bits (71), Expect = 0.50
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Frame = +3
Query: 342 FFASKDSDHGSTDEEDIV-----RKKPKNNTIESDDEENET 449
+ + + D ST + DI K+PK TI+SDD+EN T
Sbjct: 384 YLSDGEGDEDSTSDNDIAGDKKKEKQPKRITIDSDDDENST 424
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 31.9 bits (69), Expect = 0.88
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = +1
Query: 256 PVTVPLVVAPE----ATQSVQGKLQSGRNPSPDSLPPRTLIMAL 375
PVT+P++VAPE A S G+ R+P P S P R + M L
Sbjct: 1137 PVTIPVLVAPEDSTSAEPSTSGQSLLMRSPRPQSPPLRDIKMDL 1180
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 31.9 bits (69), Expect = 0.88
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = +1
Query: 256 PVTVPLVVAPE----ATQSVQGKLQSGRNPSPDSLPPRTLIMAL 375
PVT+P++VAPE A S G+ R+P P S P R + M L
Sbjct: 1205 PVTIPVLVAPEDSTSAEPSTSGQSLLMRSPRPQSPPLRDIKMDL 1248
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 31.9 bits (69), Expect = 0.88
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = +1
Query: 256 PVTVPLVVAPE----ATQSVQGKLQSGRNPSPDSLPPRTLIMAL 375
PVT+P++VAPE A S G+ R+P P S P R + M L
Sbjct: 1205 PVTIPVLVAPEDSTSAEPSTSGQSLLMRSPRPQSPPLRDIKMDL 1248
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 31.9 bits (69), Expect = 0.88
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = +1
Query: 256 PVTVPLVVAPE----ATQSVQGKLQSGRNPSPDSLPPRTLIMAL 375
PVT+P++VAPE A S G+ R+P P S P R + M L
Sbjct: 1205 PVTIPVLVAPEDSTSAEPSTSGQSLLMRSPRPQSPPLRDIKMDL 1248
>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
protein T05A10.1g protein.
Length = 1888
Score = 31.9 bits (69), Expect = 0.88
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = +1
Query: 256 PVTVPLVVAPE----ATQSVQGKLQSGRNPSPDSLPPRTLIMAL 375
PVT+P++VAPE A S G+ R+P P S P R + M L
Sbjct: 1205 PVTIPVLVAPEDSTSAEPSTSGQSLLMRSPRPQSPPLRDIKMDL 1248
>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical protein
T05A10.1i protein.
Length = 1927
Score = 31.9 bits (69), Expect = 0.88
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = +1
Query: 256 PVTVPLVVAPE----ATQSVQGKLQSGRNPSPDSLPPRTLIMAL 375
PVT+P++VAPE A S G+ R+P P S P R + M L
Sbjct: 1205 PVTIPVLVAPEDSTSAEPSTSGQSLLMRSPRPQSPPLRDIKMDL 1248
>Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical protein
T05A10.1j protein.
Length = 1509
Score = 31.9 bits (69), Expect = 0.88
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = +1
Query: 256 PVTVPLVVAPE----ATQSVQGKLQSGRNPSPDSLPPRTLIMAL 375
PVT+P++VAPE A S G+ R+P P S P R + M L
Sbjct: 1205 PVTIPVLVAPEDSTSAEPSTSGQSLLMRSPRPQSPPLRDIKMDL 1248
>Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical
protein T05A10.1c protein.
Length = 1692
Score = 31.9 bits (69), Expect = 0.88
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = +1
Query: 256 PVTVPLVVAPE----ATQSVQGKLQSGRNPSPDSLPPRTLIMAL 375
PVT+P++VAPE A S G+ R+P P S P R + M L
Sbjct: 763 PVTIPVLVAPEDSTSAEPSTSGQSLLMRSPRPQSPPLRDIKMDL 806
>AY390552-1|AAQ94964.1| 557|Caenorhabditis elegans SMA-9 class III
protein.
Length = 557
Score = 31.9 bits (69), Expect = 0.88
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = +1
Query: 256 PVTVPLVVAPE----ATQSVQGKLQSGRNPSPDSLPPRTLIMAL 375
PVT+P++VAPE A S G+ R+P P S P R + M L
Sbjct: 253 PVTIPVLVAPEDSTSAEPSTSGQSLLMRSPRPQSPPLRDIKMDL 296
>AY390551-1|AAQ94963.1| 926|Caenorhabditis elegans SMA-9 class IIc
protein.
Length = 926
Score = 31.9 bits (69), Expect = 0.88
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = +1
Query: 256 PVTVPLVVAPE----ATQSVQGKLQSGRNPSPDSLPPRTLIMAL 375
PVT+P++VAPE A S G+ R+P P S P R + M L
Sbjct: 204 PVTIPVLVAPEDSTSAEPSTSGQSLLMRSPRPQSPPLRDIKMDL 247
>AY390545-1|AAQ94957.1| 792|Caenorhabditis elegans SMA-9 class IIb
protein.
Length = 792
Score = 31.9 bits (69), Expect = 0.88
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = +1
Query: 256 PVTVPLVVAPE----ATQSVQGKLQSGRNPSPDSLPPRTLIMAL 375
PVT+P++VAPE A S G+ R+P P S P R + M L
Sbjct: 108 PVTIPVLVAPEDSTSAEPSTSGQSLLMRSPRPQSPPLRDIKMDL 151
>AF089729-1|AAD04156.1| 458|Caenorhabditis elegans SMG-7 protein.
Length = 458
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +3
Query: 351 SKDSDHGSTDEEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLTGENNHKIDEYY 530
SKDSD + EED + I+++D E E+ + +E L+ G N + +DE
Sbjct: 393 SKDSDQSTIPEEDQKSLSTDTSRIQNEDSEPESESESSDEEVLQRGRRRGRNPN-LDESV 451
Query: 531 TNNND 545
+ D
Sbjct: 452 ETDED 456
>AC024204-5|AAF36043.1| 458|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 7 protein.
Length = 458
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +3
Query: 351 SKDSDHGSTDEEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLTGENNHKIDEYY 530
SKDSD + EED + I+++D E E+ + +E L+ G N + +DE
Sbjct: 393 SKDSDQSTIPEEDQKSLSTDTSRIQNEDSEPESESESSDEEVLQRGRRRGRNPN-LDESV 451
Query: 531 TNNND 545
+ D
Sbjct: 452 ETDED 456
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 31.1 bits (67), Expect = 1.5
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +3
Query: 312 TPKWQKPITRFFASKDSD-HGSTDEEDIVRKKPKNNTIESDDEENETPTNQVLDETLELE 488
+P PI + D + +D+++I+ PK I +DE P + ET+ +E
Sbjct: 634 SPSVSDPIMPQSSQNDQELQAISDQQEILEDVPKEEPIIEEDE----PKYEYSQETIPVE 689
Query: 489 PLTGENNHKIDEYYTNN 539
L E K D+ T+N
Sbjct: 690 ELKDEVEFKEDQQSTSN 706
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 30.7 bits (66), Expect = 2.0
Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 8/124 (6%)
Frame = +3
Query: 354 KDSDHGSTDEEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLTGENNHKIDEYY- 530
KD + DEED +KK K + +DEE + + D+ + + EN+ K D+
Sbjct: 167 KDEKNDDDDEED--KKKDKKKKKDDNDEEEKEKDKKKKDKKKDDDDDEDENDKKKDKKKK 224
Query: 531 -------TNNNDVNGDGHEKKTLEEXXXXXXXXXXXXXXXXXENLDYNSDRKRYRDEKDA 689
N +D D +KK +E +N D D+K+ + +K
Sbjct: 225 KDDKDDDENEDDKKKDKKKKKDDKEKDDDDEEEKDKKKKDKKKNDDDEEDKKKDKKKKKD 284
Query: 690 NEEN 701
++++
Sbjct: 285 DDDD 288
Score = 30.3 bits (65), Expect = 2.7
Identities = 29/114 (25%), Positives = 47/114 (41%)
Frame = +3
Query: 354 KDSDHGSTDEEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLTGENNHKIDEYYT 533
K + EE+ KK K+ E DDEE E + DE + + E+ K +
Sbjct: 130 KQEEEDKKKEEEEKDKKKKDKKKEEDDEEEEQKDKKKKDEKNDDD--DEEDKKKDKKKKK 187
Query: 534 NNNDVNGDGHEKKTLEEXXXXXXXXXXXXXXXXXENLDYNSDRKRYRDEKDANE 695
++ND +KK ++ EN D D+K+ +D+KD +E
Sbjct: 188 DDNDEEEKEKDKKKKDK--------KKDDDDDEDEN-DKKKDKKKKKDDKDDDE 232
>Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical
protein F54C9.9 protein.
Length = 740
Score = 30.3 bits (65), Expect = 2.7
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +3
Query: 324 QKPITRFFASKDSDHGSTDEEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLTGE 503
+KPI F +DSD+ D D+ K + + DDEE+E + ++ + +
Sbjct: 403 EKPI--FSDMEDSDYEDYDNLDVDELKREEQEADDDDEEDEESVDDEDEQEVPKSKKSAM 460
Query: 504 NNHKID 521
N K D
Sbjct: 461 KNGKFD 466
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 30.3 bits (65), Expect = 2.7
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +3
Query: 357 DSDHGSTDEEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLTGENNHKIDE 524
D+D T+ ED + ++ +E DDEE ET ++ D+ + + + EN K+ E
Sbjct: 1852 DADADETNSED--KTVGADDAMEEDDEEEETMEDEEDDDDDDDDESSNENQEKLVE 1905
>AL117195-6|CAB55013.2| 503|Caenorhabditis elegans Hypothetical
protein Y57A10A.8 protein.
Length = 503
Score = 30.3 bits (65), Expect = 2.7
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 354 KDSDHGSTDEEDIVRKKPKNNTIESDDEENETPTNQV-LDETLELEPLTGENNHKIDEYY 530
+DS+ GS V+ +PK+ +E+ T+ V E+L +P ++ D+Y+
Sbjct: 277 RDSESGSAKNARAVKSEPKSKPQSDLHYSSESDTDDVEFVESLPGKPKLEPIDYDYDQYF 336
Query: 531 TNNNDVNGDGHEKKTLE 581
N DV+ + ++++ +E
Sbjct: 337 --NRDVSYNNYDQEEVE 351
>Z70683-1|CAA94590.1| 511|Caenorhabditis elegans Hypothetical
protein F13B12.1 protein.
Length = 511
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 351 SKDSDHGSTDEEDIVRKKPKNNTIESDDEENETPTNQVLDETLE 482
S DSDH T +++ K + + DDE+ TN LDE +E
Sbjct: 129 SDDSDHEGTSKKEPTTKNLFGDDSDDDDEDRPKKTND-LDEFVE 171
>L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans
chromodomain proteinprotein 1 protein.
Length = 304
Score = 29.9 bits (64), Expect = 3.5
Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 5/99 (5%)
Frame = +3
Query: 303 PRETPKWQKPITRFFASKDSDHGS-TDEE----DIVRKKPKNNTIESDDEENETPTNQVL 467
P+ PK P + A D S TDEE D K +E D+E +V
Sbjct: 103 PKPPPKKSPPKRQRLAGGDIRPDSDTDEEHSSADKKSKAEDEEEVEDDEEPVPKKKKEVQ 162
Query: 468 DETLELEPLTGENNHKIDEYYTNNNDVNGDGHEKKTLEE 584
+E E E + GE+ + E D + EK+ E+
Sbjct: 163 EEPEEEESVEGEDEEESQEVEDLKEDEKMEEDEKEEEED 201
>AY572975-1|AAT77228.1| 580|Caenorhabditis elegans KQT-3 potassium
channel protein.
Length = 580
Score = 29.9 bits (64), Expect = 3.5
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -1
Query: 453 LVFHFLHRPILWCCFLVFFSLYLLRL 376
++++ L RP W CFL FS++L+ L
Sbjct: 22 MIYNCLERPTGWKCFLYHFSVFLIVL 47
>AL032648-2|CAA21699.2| 621|Caenorhabditis elegans Hypothetical
protein Y54G9A.3 protein.
Length = 621
Score = 29.9 bits (64), Expect = 3.5
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -1
Query: 453 LVFHFLHRPILWCCFLVFFSLYLLRL 376
++++ L RP W CFL FS++L+ L
Sbjct: 63 MIYNCLERPTGWKCFLYHFSVFLIVL 88
>AC024792-2|AAF60680.2| 813|Caenorhabditis elegans Hypothetical
protein Y48G1A.4 protein.
Length = 813
Score = 29.9 bits (64), Expect = 3.5
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = +3
Query: 318 KWQKPITRFFASKDSDHGSTDEEDI----VRKKPKNNTIESDDEENETPTNQVLDETLEL 485
K Q +RF D + G DE+ + + KK + + ESDD+E+ + LD+ LE
Sbjct: 289 KVQAKNSRFEVKFDDEGGLIDEDTVEKSRILKKNLDGSDESDDDEDLEDEEEDLDDLLED 348
Query: 486 E 488
E
Sbjct: 349 E 349
>Z81565-5|CAB04583.1| 332|Caenorhabditis elegans Hypothetical
protein K04C1.6 protein.
Length = 332
Score = 29.1 bits (62), Expect = 6.2
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 9/73 (12%)
Frame = -1
Query: 450 VFHFLHRPILWCCFLVFFSLYLLRL*SHDQSP------WRQRIW*WVSATLEFPLDRLGC 289
VFHFLH + ++ F + L R S +P WR+R W +V A P
Sbjct: 98 VFHFLHYYFAYAQYIYNFFISLNRF-SLITNPIKSELFWRKRFWWFVFAIFAIPWAFAVP 156
Query: 288 L---RSYYERHGH 259
+ RSYY H H
Sbjct: 157 ILVGRSYYVYHSH 169
>Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical
protein F02E9.4b protein.
Length = 1507
Score = 29.1 bits (62), Expect = 6.2
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = +3
Query: 351 SKDSDHGSTDEEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLTGENNHKIDE 524
SKD D + ++ED+ + K K++ DDE++E + + D+ E + E+NH I+E
Sbjct: 405 SKDEDR-TIEDEDMDKSKEKDDVDGIDDEDDE--ESGIEDK--NNEEMMEEDNHLIEE 457
>Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical
protein F02E9.4a protein.
Length = 1505
Score = 29.1 bits (62), Expect = 6.2
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = +3
Query: 351 SKDSDHGSTDEEDIVRKKPKNNTIESDDEENETPTNQVLDETLELEPLTGENNHKIDE 524
SKD D + ++ED+ + K K++ DDE++E + + D+ E + E+NH I+E
Sbjct: 405 SKDEDR-TIEDEDMDKSKEKDDVDGIDDEDDE--ESGIEDK--NNEEMMEEDNHLIEE 457
>Z70267-8|CAA94216.1| 332|Caenorhabditis elegans Hypothetical
protein K04C1.6 protein.
Length = 332
Score = 29.1 bits (62), Expect = 6.2
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 9/73 (12%)
Frame = -1
Query: 450 VFHFLHRPILWCCFLVFFSLYLLRL*SHDQSP------WRQRIW*WVSATLEFPLDRLGC 289
VFHFLH + ++ F + L R S +P WR+R W +V A P
Sbjct: 98 VFHFLHYYFAYAQYIYNFFISLNRF-SLITNPIKSELFWRKRFWWFVFAIFAIPWAFAVP 156
Query: 288 L---RSYYERHGH 259
+ RSYY H H
Sbjct: 157 ILVGRSYYVYHSH 169
>U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical
protein F16F9.1 protein.
Length = 157
Score = 29.1 bits (62), Expect = 6.2
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 223 HHHRVHPALQVPVTVPLVVAPEATQSVQGKLQSGRNPSP 339
HH++V P VP+T P V+ E Q+V + G P+P
Sbjct: 37 HHYKVSPPPFVPLTQPTVIDVEQLQNV---VLPGGQPNP 72
>Z12017-9|CAA78053.1| 537|Caenorhabditis elegans Hypothetical
protein R08D7.7 protein.
Length = 537
Score = 28.7 bits (61), Expect = 8.2
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +3
Query: 318 KWQKPITRFFASKDSDHGST-DEEDIVRKKPKNN-TIESDDEE 440
KW K + + A D+ G DE++IV +KPK + T E +EE
Sbjct: 350 KWDKIMKKTPAGNDNYIGFFFDEDEIVPRKPKGDYTFECSEEE 392
>Z11505-11|CAA77591.1| 537|Caenorhabditis elegans Hypothetical
protein R08D7.7 protein.
Length = 537
Score = 28.7 bits (61), Expect = 8.2
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +3
Query: 318 KWQKPITRFFASKDSDHGST-DEEDIVRKKPKNN-TIESDDEE 440
KW K + + A D+ G DE++IV +KPK + T E +EE
Sbjct: 350 KWDKIMKKTPAGNDNYIGFFFDEDEIVPRKPKGDYTFECSEEE 392
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,504,730
Number of Sequences: 27780
Number of extensions: 402359
Number of successful extensions: 1710
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1662
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3130337400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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