Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_M02
(1214 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0533 + 3868230-3868564,3869040-3869098,3869187-3869225,386... 274 9e-74
06_03_1052 - 27217792-27217846,27218025-27218114,27218191-272182... 269 3e-72
02_04_0507 + 23546911-23546953,23547011-23547111,23547695-235478... 224 1e-58
08_01_0179 + 1519141-1519144,1519278-1519301,1519417-1519517,151... 223 3e-58
04_04_0306 + 24280773-24280776,24280906-24280929,24281023-242811... 221 1e-57
04_04_0120 + 22911863-22911904,22912002-22912112,22912212-229127... 165 8e-41
03_01_0208 + 1642041-1642118,1642200-1642310,1643157-1643318,164... 151 1e-36
01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755 33 0.45
07_03_1666 + 28482262-28482385,28482475-28482992 29 5.6
04_04_0297 - 24219497-24219853,24221242-24222414 29 5.6
04_04_0077 + 22568757-22568895,22568999-22569954,22570021-22570488 29 7.4
04_04_0145 + 23103397-23104308 29 9.8
01_06_1782 - 39842133-39842160,39842531-39842657,39842980-39844675 29 9.8
>02_01_0533 +
3868230-3868564,3869040-3869098,3869187-3869225,
3869629-3869729,3870288-3870400,3870976-3871075,
3871170-3871316,3871442-3871502,3871616-3871713,
3871786-3871928,3872221-3872304,3872389-3872478,
3872574-3872628
Length = 474
Score = 274 bits (672), Expect = 9e-74
Identities = 135/203 (66%), Positives = 154/203 (75%), Gaps = 2/203 (0%)
Frame = +1
Query: 172 LVLR-ASIEKGAXVVAINDPXIGLDYMVYLFKYDSTXGRFKGSVEV-QDGFLVVNGNKIA 345
LVLR A+ VVA+NDP I YM Y+FKYDST G FKGS++V D L +NG K+
Sbjct: 152 LVLRIATSRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGSIKVVDDSTLEINGKKVT 211
Query: 346 VFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAPMFVVGV 525
+ S+RDP IPWG GAEYVVES+GVFTTT+KASAHL+GGAKKV+ISAPSADAPMFVVGV
Sbjct: 212 ITSKRDPADIPWGNFGAEYVVESSGVFTTTEKASAHLKGGAKKVVISAPSADAPMFVVGV 271
Query: 526 NLEAYDPSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKL 705
N ++YDP V+SNASCTTNCLAPLAKV+H+ F IVEGLM DGPS K
Sbjct: 272 NEKSYDPKMNVVSNASCTTNCLAPLAKVVHEEFGIVEGLMTTVHATTATQKTVDGPSMKD 331
Query: 706 WRDGRGAQQNIIPASTGAAKAVG 774
WR GRGA QNIIP+STGAAKAVG
Sbjct: 332 WRGGRGAAQNIIPSSTGAAKAVG 354
Score = 37.9 bits (84), Expect = 0.016
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +2
Query: 764 KLWGKVIPALNGKLTGMAFRRP 829
K GKV+P LNGKLTGMAFR P
Sbjct: 351 KAVGKVLPELNGKLTGMAFRVP 372
>06_03_1052 -
27217792-27217846,27218025-27218114,27218191-27218274,
27218526-27218668,27218748-27218845,27218959-27219019,
27219184-27219330,27219428-27219527,27219701-27219813,
27220302-27220402,27220614-27220652,27220739-27220797,
27221027-27221088,27221411-27221506
Length = 415
Score = 269 bits (659), Expect = 3e-72
Identities = 132/203 (65%), Positives = 154/203 (75%), Gaps = 2/203 (0%)
Frame = +1
Query: 172 LVLRASIEKG-AXVVAINDPXIGLDYMVYLFKYDSTXGRFKGSVEVQD-GFLVVNGNKIA 345
LVLR + + VVA+NDP I YM Y+FKYDST G FKG+++V D L +NG KI+
Sbjct: 93 LVLRIATNRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGTIKVVDESTLEINGKKIS 152
Query: 346 VFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAPMFVVGV 525
V S+RDP IPWG GAEYVVES+GVFTTT+KASAHL+GGA+KV+ISAPSADAPMFVVGV
Sbjct: 153 VTSKRDPSDIPWGNFGAEYVVESSGVFTTTEKASAHLKGGARKVVISAPSADAPMFVVGV 212
Query: 526 NLEAYDPSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKL 705
N + Y+PS V+SNASCTTNCLAPLAK++H+ F I EGLM DGPS K
Sbjct: 213 NEKNYNPSMNVVSNASCTTNCLAPLAKIVHEEFGIAEGLMTTVHATTATQKTVDGPSMKD 272
Query: 706 WRDGRGAQQNIIPASTGAAKAVG 774
WR GRGA QNIIP+STGAAKAVG
Sbjct: 273 WRGGRGASQNIIPSSTGAAKAVG 295
Score = 39.9 bits (89), Expect = 0.004
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +2
Query: 764 KLWGKVIPALNGKLTGMAFRRP 829
K GKV+PALNGKLTGMAFR P
Sbjct: 292 KAVGKVLPALNGKLTGMAFRVP 313
>02_04_0507 +
23546911-23546953,23547011-23547111,23547695-23547810,
23547897-23547996,23548027-23548215,23548303-23548363,
23548469-23548566,23548943-23549085,23549228-23549311,
23549423-23549512,23549599-23549644
Length = 356
Score = 224 bits (547), Expect = 1e-58
Identities = 121/218 (55%), Positives = 147/218 (67%), Gaps = 17/218 (7%)
Frame = +1
Query: 172 LVLRASIE-KGAXVVAINDPXIGLDYMVYLFKYDSTXGRFKG-SVEVQDGFLVVNGNK-I 342
LV R +++ + +VA+NDP I +YM Y+FKYD+ G++K V+V+D ++ G K +
Sbjct: 22 LVARVALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWKHHEVKVKDSKTLIFGTKEV 81
Query: 343 AVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHL--------------EGGAKKVI 480
AVF R+P+ IPW AGAEYVVESTGVFT DKA+AHL +GGAKKV+
Sbjct: 82 AVFGCRNPEEIPWAAAGAEYVVESTGVFTDKDKAAAHLKGQAVDLFSIIFHMQGGAKKVV 141
Query: 481 ISAPSADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXXX 660
ISAPS DAPMFVVGVN + Y ++SNASCTTNCLAPLAKVI+D F IVEGLM
Sbjct: 142 ISAPSKDAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHA 201
Query: 661 XXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVG 774
DGPS K WR GR A NIIP+STGAAKAVG
Sbjct: 202 ITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVG 239
Score = 39.9 bits (89), Expect = 0.004
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +2
Query: 764 KLWGKVIPALNGKLTGMAFRRP 829
K GKV+PALNGKLTGMAFR P
Sbjct: 236 KAVGKVLPALNGKLTGMAFRVP 257
>08_01_0179 +
1519141-1519144,1519278-1519301,1519417-1519517,
1519805-1519920,1519944-1520112,1520713-1520859,
1520943-1521003,1521086-1521183,1521608-1521750,
1521980-1522063,1522191-1522280,1522375-1522420
Length = 360
Score = 223 bits (544), Expect = 3e-58
Identities = 120/227 (52%), Positives = 148/227 (65%), Gaps = 26/227 (11%)
Frame = +1
Query: 172 LVLRASIE-KGAXVVAINDPXIGLDYMVYLFKYDSTXGRFKGS-VEVQDGFLVVNGNK-I 342
LV R +++ + +VA+NDP I DYM Y+FKYD+ G++K S ++++D ++ G K +
Sbjct: 17 LVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPV 76
Query: 343 AVFS-----------------------ERDPKAIPWGKAGAEYVVESTGVFTTTDKASAH 453
VF ER+P IPW +AGAEYVVESTGVFT +KA+AH
Sbjct: 77 TVFGISLDESNLFMVASVELMFDPVQFERNPDEIPWAEAGAEYVVESTGVFTDKEKAAAH 136
Query: 454 LEGGAKKVIISAPSADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAPLAKVIHDNFEIV 633
L+GGAKKV+ISAPS DAPMFV GVN + Y ++SNASCTTNCLAPLAKVIHDNF I+
Sbjct: 137 LKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPLAKVIHDNFGII 196
Query: 634 EGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVG 774
EGLM DGPS K WR GR A NIIP+STGAAKAVG
Sbjct: 197 EGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVG 243
Score = 36.3 bits (80), Expect = 0.049
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +2
Query: 764 KLWGKVIPALNGKLTGMAFRRP 829
K GKV+P LNGKLTGM+FR P
Sbjct: 240 KAVGKVLPDLNGKLTGMSFRVP 261
>04_04_0306 +
24280773-24280776,24280906-24280929,24281023-24281123,
24281359-24281502,24281667-24281782,24281869-24281968,
24282068-24282214,24282329-24282389,24282480-24282577,
24283118-24283260,24283374-24283457,24283538-24283627,
24284018-24284063
Length = 385
Score = 221 bits (539), Expect = 1e-57
Identities = 109/178 (61%), Positives = 131/178 (73%), Gaps = 2/178 (1%)
Frame = +1
Query: 247 MVYLFKYDSTXGRFKG-SVEVQDGFLVVNGNK-IAVFSERDPKAIPWGKAGAEYVVESTG 420
+ Y+FKYD+ G++K V+V+D ++ G K + VF R+P+ IPWG+ GAE+VVESTG
Sbjct: 91 VTYMFKYDTVHGQWKHHEVKVKDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTG 150
Query: 421 VFTTTDKASAHLEGGAKKVIISAPSADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAPL 600
VFT DKA+AHL+GGAKKV+ISAPS DAPMFVVGVN + Y P ++SNASCTTNCLAPL
Sbjct: 151 VFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPL 210
Query: 601 AKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVG 774
AKVI+D F IVEGLM DGPS K WR GR A NIIP+STGAAKAVG
Sbjct: 211 AKVINDRFGIVEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVG 268
Score = 39.9 bits (89), Expect = 0.004
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +2
Query: 764 KLWGKVIPALNGKLTGMAFRRP 829
K GKV+PALNGKLTGMAFR P
Sbjct: 265 KAVGKVLPALNGKLTGMAFRVP 286
>04_04_0120 +
22911863-22911904,22912002-22912112,22912212-22912764,
22912852-22913354
Length = 402
Score = 165 bits (400), Expect = 8e-41
Identities = 88/190 (46%), Positives = 112/190 (58%), Gaps = 2/190 (1%)
Frame = +1
Query: 208 VVAINDPXIGLDYMVYLFKYDSTXGRFKGSVE-VQDGFLVVNGNKIAVFSERDPKAIPWG 384
V+AIND G+ +L KYDST G F V+ V D + V+G I V S+R+P +PWG
Sbjct: 96 VIAINDTG-GVKQASHLLKYDSTLGIFDADVKPVGDNAISVDGKVIKVVSDRNPSNLPWG 154
Query: 385 KAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPS-ADAPMFVVGVNLEAYDPSFKVI 561
+ G + V+E TGVF D A H++ GAKKV+I+AP D P +VVGVN + Y P +I
Sbjct: 155 ELGIDLVIEGTGVFVDRDGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADQYSPDEPII 214
Query: 562 SNASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNII 741
SNASCTTNCLAP K++ F I++G M D L R R A NI+
Sbjct: 215 SNASCTTNCLAPFVKILDQKFGIIKGTMTTTHSYTGDQRLLDASHRDL-RRARAAALNIV 273
Query: 742 PASTGAAKAV 771
P STGAAKAV
Sbjct: 274 PTSTGAAKAV 283
>03_01_0208 +
1642041-1642118,1642200-1642310,1643157-1643318,
1643433-1643600,1643683-1643843,1643930-1643991,
1644078-1644127,1644247-1644653,1644760-1644895
Length = 444
Score = 151 bits (365), Expect = 1e-36
Identities = 87/192 (45%), Positives = 109/192 (56%), Gaps = 4/192 (2%)
Frame = +1
Query: 208 VVAINDPXIGLDYMVYLFKYDSTXGRFKGSVE-VQDGFLVVNGNKIAVFSERDPKAIPWG 384
VV +ND G+ +L KYDS G FK V+ V D + V+G I V S RDP +PW
Sbjct: 106 VVVVNDSG-GVRNASHLLKYDSMLGTFKADVKIVDDQTISVDGKLIKVVSNRDPLKLPWA 164
Query: 385 KAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPS--ADAPMFVVGVNLEAYDPSF-K 555
+ G + V+E TGVF A H++ GAKKVII+AP+ AD P +V+GVN Y
Sbjct: 165 ELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVLGVNEGDYSHEVAN 224
Query: 556 VISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQN 735
+ISNASCTTNCLAP K++ + F IV+G M D L R R A N
Sbjct: 225 IISNASCTTNCLAPFVKILDEEFGIVKGTMTTTHSYTGDQRLLDASHRDL-RRARAAALN 283
Query: 736 IIPASTGAAKAV 771
I+P STGAAKAV
Sbjct: 284 IVPTSTGAAKAV 295
>01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755
Length = 482
Score = 33.1 bits (72), Expect = 0.45
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 331 GNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDK 441
GNK+ D + + WGK E + E G+ T+T+K
Sbjct: 445 GNKVDEMKSGDRQHLWWGKRNVEQITEKLGLLTSTEK 481
>07_03_1666 + 28482262-28482385,28482475-28482992
Length = 213
Score = 29.5 bits (63), Expect = 5.6
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -1
Query: 527 LTPTTNMGASALGADIITFLAPPSK*ADALSVVVKTPVDSTTYSAPAFPHGMAL--GSLS 354
+T + MG+ G+ + + PP + S+ TT AP PHG + + +
Sbjct: 81 VTSSEMMGSLMSGSGRVAVITPPPAASGGASLPAAAAAGGTTLVAPVVPHGARILGATAA 140
Query: 353 ENT 345
+NT
Sbjct: 141 DNT 143
>04_04_0297 - 24219497-24219853,24221242-24222414
Length = 509
Score = 29.5 bits (63), Expect = 5.6
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 228 RVIYSDHXSSFFNRSTEHQXADAAKSXDSN 139
R I+SDH S+FF T+ D K +SN
Sbjct: 444 RKIFSDHDSAFFGECTQKFNDDELKQEESN 473
>04_04_0077 + 22568757-22568895,22568999-22569954,22570021-22570488
Length = 520
Score = 29.1 bits (62), Expect = 7.4
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Frame = +1
Query: 256 LFKYDSTXGRFKGSVEVQDGFLVVNGNKIAVFSERDPKAIPW------GKAGAEYVVEST 417
L+ + RF+GS+ V F + G IA + +PW G AGA V
Sbjct: 157 LYLAEMAPPRFRGSLTVGFQFFLSLGILIANLTNYGTARVPWGWRLSLGLAGAPAVFIVV 216
Query: 418 GVFTTTDKASAHLEGG 465
G F TD S+ + G
Sbjct: 217 GAFFLTDTPSSFVMRG 232
>04_04_0145 + 23103397-23104308
Length = 303
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +1
Query: 814 GIPPSLLANGIWXXI*LVRLGKXCQAYE 897
GIP LLA G+W RLGK C+A E
Sbjct: 80 GIPLLLLATGVW------RLGKRCEAVE 101
>01_06_1782 - 39842133-39842160,39842531-39842657,39842980-39844675
Length = 616
Score = 28.7 bits (61), Expect = 9.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 659 PQLLHRKLLMDLLENYGVMAVVLNKTSFLPLLVLPKLWGKVI 784
P++ H L+DLL G + N +P+ P+LWG ++
Sbjct: 445 PKVEHYGALIDLLGRAGRVDQARNTIETMPMEPTPELWGSLL 486
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,679,932
Number of Sequences: 37544
Number of extensions: 559869
Number of successful extensions: 1182
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3724688640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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