Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_M01
         (1184 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0167 - 1159231-1159263,1159348-1159419,1159957-1160052,116...   107   2e-23
07_03_0886 - 22293092-22293451,22294063-22294524                       29   9.4  
06_02_0051 - 10957857-10958127,10959791-10960035,10960160-109602...    29   9.4  

>02_01_0167 -
           1159231-1159263,1159348-1159419,1159957-1160052,
           1160248-1160358,1160768-1160800,1160963-1161076
          Length = 152

 Score =  107 bits (256), Expect = 2e-23
 Identities = 59/120 (49%), Positives = 75/120 (62%), Gaps = 2/120 (1%)
 Frame = +1

Query: 205 PVASAXPGPLLLRVXCSTG-RHNSPGXXVRGNVPQNELQIYTWMDATLRELTGLVKEVNP 381
           PV      PLLLRV    G  H +    VRG  P++E+QIYTW DATLRELT LVKEV  
Sbjct: 33  PVDREKTCPLLLRVFTKVGGHHQNEEFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAL 92

Query: 382 ETRRKGTYFDFAIVYPDMRSPTYRMREIGVTCS-GQRGGDDNKTLSQLKFQIGNYLDISI 558
             R++     FA VYPD +   + ++E+G T S G   GDD KTL++L FQIG+YL ++I
Sbjct: 93  AARKRNARLSFAFVYPD-KHGRFVVKEVGSTFSYGHGRGDDAKTLAELGFQIGDYLSVAI 151


>07_03_0886 - 22293092-22293451,22294063-22294524
          Length = 273

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +1

Query: 160 GFASMVVAAIXPXAXPVASAXPGPLLLRVXCSTGRHNSP 276
           G  S   +A        A+A PGP+LL + CS G   SP
Sbjct: 10  GRGSATASAPDQPEEAAAAAAPGPVLLELFCSQGCGASP 48


>06_02_0051 -
           10957857-10958127,10959791-10960035,10960160-10960229,
           10960319-10960986
          Length = 417

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 337 ATLRELTGLVKEVNPETRRKGTYFDFAIV-YPDMRSPTYRMRE 462
           A LRE++G ++  +   + K   FD ++   PD   P  R+RE
Sbjct: 93  ARLREISGTIRSRHGRVQTKAVVFDLSLASTPDGDQPLRRLRE 135


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,908,779
Number of Sequences: 37544
Number of extensions: 303394
Number of successful extensions: 727
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3608292120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)